RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C TY1A-PR1P0CX58 440 aa9.45□□□□□ -0.9
RPF2YKR081C TY1A-ORP0CX59 440 aa9.45□□□□□ -0.9
RPF2YKR081C TY1A-PR2P0CX60 440 aa9.45□□□□□ -0.9
RPF2YKR081C TY1A-DR5P0CX65 440 aa9.45□□□□□ -0.9
RPF2YKR081C TY1A-ER2P0CX66 440 aa9.45□□□□□ -0.9
RPF2YKR081C TY1A-GR3P0CX67 440 aa9.45□□□□□ -0.9
RPF2YKR081C TY1A-LR1P0CX68 440 aa9.45□□□□□ -0.9
RPF2YKR081C TY1A-MR2P0CX69 440 aa9.45□□□□□ -0.9
RPF2YKR081C PSE1P32337 1089 aaKnown RBP9.45□□□□□ -0.9
RPF2YKR081C TY1A-JR2P47099 440 aa9.45□□□□□ -0.9
RPF2YKR081C TY1A-DR1Q03856 440 aa9.45□□□□□ -0.9
RPF2YKR081C TY1A-ML1Q04706 440 aaKnown RBP9.45□□□□□ -0.9
RPF2YKR081C TY1A-BRQ12217 440 aa9.45□□□□□ -0.9
RPF2YKR081C TY1A-NL2Q12470 440 aa9.45□□□□□ -0.9
RPF2YKR081C TY1A-GR2Q12485 440 aa9.45□□□□□ -0.9
RPF2YKR081C RRN7P40992 514 aa9.44□□□□□ -0.9
RPF2YKR081C KEX2P13134 814 aa9.42□□□□□ -0.9
RPF2YKR081C IES2P40154 320 aa9.41□□□□□ -0.9
RPF2YKR081C DSF2P38213 736 aa9.4□□□□□ -0.9
RPF2YKR081C CST6P40535 587 aa9.39□□□□□ -0.91
RPF2YKR081C FRK1Q03002 865 aaPredicted RBP9.39□□□□□ -0.91
RPF2YKR081C CLB5P30283 435 aa9.38□□□□□ -0.91
RPF2YKR081C ERF2Q06551 359 aa9.38□□□□□ -0.91
RPF2YKR081C BDP1P46678 594 aa9.33□□□□□ -0.92
RPF2YKR081C TEA1P47988 759 aa9.33□□□□□ -0.92
RPF2YKR081C LAM6Q08001 693 aa9.33□□□□□ -0.92
RPF2YKR081C AIR1P40507 360 aaKnown RBP9.32□□□□□ -0.92
RPF2YKR081C CLA4P48562 842 aa9.3□□□□□ -0.92
RPF2YKR081C NUP42P49686 430 aaKnown RBP9.3□□□□□ -0.92
RPF2YKR081C DIT2P21595 489 aa9.28□□□□□ -0.92
RPF2YKR081C YNL115CP53925 644 aa9.27□□□□□ -0.93
RPF2YKR081C GCR2Q01722 534 aa9.27□□□□□ -0.93
RPF2YKR081C PAC1P39946 494 aaKnown RBP9.25□□□□□ -0.93
RPF2YKR081C TUB4P53378 473 aa9.25□□□□□ -0.93
RPF2YKR081C RTF1P53064 558 aa9.24□□□□□ -0.93
RPF2YKR081C BRE2P43132 505 aa9.22□□□□□ -0.93
RPF2YKR081C NIS1P53939 407 aa9.22□□□□□ -0.93
RPF2YKR081C CDC4P07834 779 aa9.21□□□□□ -0.94
RPF2YKR081C HED1Q03937 162 aa9.21□□□□□ -0.94
RPF2YKR081C YMR196WQ04336 1088 aa9.2□□□□□ -0.94
RPF2YKR081C SIT4P20604 311 aa9.19□□□□□ -0.94
RPF2YKR081C AGE1Q04412 482 aa9.19□□□□□ -0.94
RPF2YKR081C SLY41P22215 453 aa9.17□□□□□ -0.94
RPF2YKR081C KXD1P53158 218 aa9.16□□□□□ -0.94
RPF2YKR081C PUS5Q06244 254 aa9.16□□□□□ -0.94
RPF2YKR081C MOD5P07884 428 aa9.15□□□□□ -0.94
RPF2YKR081C ATF2P53296 535 aa9.15□□□□□ -0.94
RPF2YKR081C FPK1P53739 893 aa9.15□□□□□ -0.94
RPF2YKR081C LEU3P08638 886 aa9.14□□□□□ -0.95
RPF2YKR081C GBP2P25555 427 aaKnown RBP RIP-Chip data9.13□□□□□ -0.95 RIP-Chip
RPF2YKR081C GAR1P28007 205 aaKnown RBP9.13□□□□□ -0.95
RPF2YKR081C RGA1P39083 1007 aa9.11□□□□□ -0.95
RPF2YKR081C ASH1P34233 588 aa9.08□□□□□ -0.96
RPF2YKR081C HST3P53687 447 aa9.08□□□□□ -0.96
RPF2YKR081C TBF1Q02457 562 aa9.08□□□□□ -0.96
RPF2YKR081C HXT10P43581 546 aa9.07□□□□□ -0.96
RPF2YKR081C YNR021WP53723 404 aaKnown RBP9.07□□□□□ -0.96
RPF2YKR081C SCJ1P25303 377 aa9.06□□□□□ -0.96
RPF2YKR081C PUS6P53294 404 aa9.05□□□□□ -0.96
RPF2YKR081C MET32Q12041 191 aa9.05□□□□□ -0.96
RPF2YKR081C MMP1Q12372 583 aa9.03□□□□□ -0.96
RPF2YKR081C SYH1Q02875 849 aaKnown RBP9.02□□□□□ -0.97
RPF2YKR081C PDC1P06169 563 aaKnown RBP9.01□□□□□ -0.97
RPF2YKR081C AFT1P22149 690 aa9.01□□□□□ -0.97
RPF2YKR081C GLC3P32775 704 aa9.01□□□□□ -0.97
RPF2YKR081C HST2P53686 357 aa9.01□□□□□ -0.97
RPF2YKR081C ALR1Q08269 859 aa9.01□□□□□ -0.97
RPF2YKR081C YDL206WQ12424 762 aa9.01□□□□□ -0.97
RPF2YKR081C TPD3P31383 635 aa9□□□□□ -0.97
RPF2YKR081C GLN1P32288 370 aaKnown RBP9□□□□□ -0.97
RPF2YKR081C RRD1P40454 393 aaKnown RBP9□□□□□ -0.97
RPF2YKR081C KIP2P28743 706 aa8.99□□□□□ -0.97
RPF2YKR081C MET22P32179 357 aa8.99□□□□□ -0.97
RPF2YKR081C RPA14P50106 137 aa8.98□□□□□ -0.97
RPF2YKR081C TRM1P15565 570 aaKnown RBP8.97□□□□□ -0.97
RPF2YKR081C YPL062WQ02781 134 aa8.97□□□□□ -0.97
RPF2YKR081C AIM7Q12156 149 aa8.96□□□□□ -0.98
RPF2YKR081C ESS1P22696 170 aa8.95□□□□□ -0.98
RPF2YKR081C RPN1P38764 993 aaKnown RBP8.95□□□□□ -0.98
RPF2YKR081C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.95□□□□□ -0.98not detected
RPF2YKR081C YDR444WQ04093 687 aa8.95□□□□□ -0.98
RPF2YKR081C YPR097WQ06839 1073 aa8.95□□□□□ -0.98
RPF2YKR081C ENV9Q08651 330 aa8.94□□□□□ -0.98
RPF2YKR081C TYW1Q08960 810 aaKnown RBP8.94□□□□□ -0.98
RPF2YKR081C YJR115WP47152 169 aa8.93□□□□□ -0.98
RPF2YKR081C UGA3P26370 528 aa8.92□□□□□ -0.98
RPF2YKR081C IXR1P33417 597 aa8.92□□□□□ -0.98
RPF2YKR081C RGA2Q06407 1009 aa8.91□□□□□ -0.98
RPF2YKR081C YJU3P28321 313 aa8.88□□□□□ -0.99
RPF2YKR081C SRF1Q12516 437 aa8.88□□□□□ -0.99
RPF2YKR081C MSB3P48566 633 aaPredicted RBP8.87□□□□□ -0.99
RPF2YKR081C PKH3Q03306 898 aaPredicted RBP8.86□□□□□ -0.99
RPF2YKR081C LCB5Q06147 687 aaKnown RBP8.86□□□□□ -0.99
RPF2YKR081C KIN1P13185 1064 aa8.83□□□□□ -1
RPF2YKR081C ARG8P18544 423 aa8.83□□□□□ -1
RPF2YKR081C CSN12P47130 423 aa8.83□□□□□ -1
RPF2YKR081C KTR1P27810 393 aaKnown RBP8.79□□□□□ -1
RPF2YKR081C RSC30P38781 883 aa8.78□□□□□ -1
RPF2YKR081C PTK2P47116 818 aaKnown RBP8.78□□□□□ -1
RPF2YKR081C YLR346CQ06139 101 aa8.78□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms