RNA–Protein interactions for RNA: YKL014C

URB1, Transcript of Protein required for the normal accumulation of 25S and 5.8S rRNAs, yeast

Gene URB1, Length 5,295 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URB1	YKL014C	FKS1	P38631	1876 aa	Known RBP	0.21	□□□□□ -2.38
URB1	YKL014C	DNF2	Q12675	1612 aa		0.21	□□□□□ -2.38
URB1	YKL014C	PSH1	Q12161	406 aa		0.21	□□□□□ -2.38
URB1	YKL014C	GCN2	P15442	1659 aa		0.21	□□□□□ -2.38
URB1	YKL014C	PTC4	P38089	393 aa		0.21	□□□□□ -2.38
URB1	YKL014C	RRP5	Q05022	1729 aa	Known RBP	0.2	□□□□□ -2.38
URB1	YKL014C	MYO2	P19524	1574 aa	Known RBP	0.2	□□□□□ -2.38
URB1	YKL014C	IRC20	Q06554	1556 aa		0.2	□□□□□ -2.38
URB1	YKL014C	BUD3	P25558	1636 aa		0.2	□□□□□ -2.38
URB1	YKL014C	BNI1	P41832	1953 aa		0.2	□□□□□ -2.38
URB1	YKL014C	UTP10	P42945	1769 aa	Known RBP	0.2	□□□□□ -2.38
URB1	YKL014C	YEL023C	P39992	682 aa		0.2	□□□□□ -2.38
URB1	YKL014C	YPR204W	Q08995	1032 aa		0.2	□□□□□ -2.38
URB1	YKL014C	PHM7	Q12252	991 aa		0.2	□□□□□ -2.38
URB1	YKL014C	NUP188	P52593	1655 aa	Known RBP	0.2	□□□□□ -2.38
URB1	YKL014C	YBR056W-A	I2HB52	66 aa		0.2	□□□□□ -2.38
URB1	YKL014C	TY4B-H	P0C2J7	1802 aa		0.2	□□□□□ -2.38
URB1	YKL014C	YBT1	P32386	1661 aa		0.2	□□□□□ -2.38
URB1	YKL014C	BBC1	P47068	1157 aa		0.19	□□□□□ -2.38
URB1	YKL014C	HAP5	Q02516	242 aa		0.19	□□□□□ -2.38
URB1	YKL014C	TY4B-J	P47024	1803 aa		0.19	□□□□□ -2.38
URB1	YKL014C	ATG2	P53855	1592 aa		0.19	□□□□□ -2.38
URB1	YKL014C	RIM15	P43565	1770 aa		0.19	□□□□□ -2.38
URB1	YKL014C	RIM101	P33400	625 aa		0.19	□□□□□ -2.38
URB1	YKL014C	AIR1	P40507	360 aa	Known RBP	0.19	□□□□□ -2.38
URB1	YKL014C	GYP5	Q12344	894 aa		0.19	□□□□□ -2.38
URB1	YKL014C	BPT1	P14772	1559 aa		0.19	□□□□□ -2.38
URB1	YKL014C	YPL034W	Q03083	165 aa		0.19	□□□□□ -2.38
URB1	YKL014C	GDB1	Q06625	1536 aa		0.18	□□□□□ -2.38
URB1	YKL014C	CHC1	P22137	1653 aa	Known RBP	0.18	□□□□□ -2.38
URB1	YKL014C	LCB5	Q06147	687 aa	Known RBP	0.18	□□□□□ -2.38
URB1	YKL014C	NSG2	P53898	299 aa		0.18	□□□□□ -2.38
URB1	YKL014C	YDL176W	Q12027	708 aa		0.18	□□□□□ -2.38
URB1	YKL014C	ARO1	P08566	1588 aa	Known RBP	0.18	□□□□□ -2.38
URB1	YKL014C	FIG2	P25653	1609 aa		0.17	□□□□□ -2.38
URB1	YKL014C	MID1	P41821	548 aa		0.17	□□□□□ -2.38
URB1	YKL014C	APC1	P53886	1748 aa		0.17	□□□□□ -2.38
URB1	YKL014C	NFS1	P25374	497 aa		0.17	□□□□□ -2.38
URB1	YKL014C	TY3B-G	Q99315	1547 aa		0.17	□□□□□ -2.38
URB1	YKL014C	YML082W	Q04533	649 aa	Known RBP	0.17	□□□□□ -2.38
URB1	YKL014C	USO1	P25386	1790 aa		0.16	□□□□□ -2.38
URB1	YKL014C	BNI4	P53858	892 aa		0.16	□□□□□ -2.38
URB1	YKL014C	ERG12	P07277	443 aa		0.16	□□□□□ -2.38
URB1	YKL014C	MRF1	P30775	413 aa	Predicted RBP	0.16	□□□□□ -2.38
URB1	YKL014C	MDJ1	P35191	511 aa		0.16	□□□□□ -2.38
URB1	YKL014C	ABP1	P15891	592 aa	Known RBP	0.15	□□□□□ -2.39
URB1	YKL014C	SLX1	P38324	304 aa		0.15	□□□□□ -2.39
URB1	YKL014C	HST3	P53687	447 aa		0.15	□□□□□ -2.39
URB1	YKL014C	HPF1	Q05164	967 aa		0.15	□□□□□ -2.39
URB1	YKL014C	IML1	P47170	1584 aa		0.14	□□□□□ -2.39
URB1	YKL014C	CCT8	P47079	568 aa	Known RBP	0.14	□□□□□ -2.39
URB1	YKL014C	THI72	Q08579	599 aa		0.14	□□□□□ -2.39
URB1	YKL014C	CHD1	P32657	1468 aa		0.14	□□□□□ -2.39
URB1	YKL014C	CLA4	P48562	842 aa		0.14	□□□□□ -2.39
URB1	YKL014C	CDC4	P07834	779 aa		0.14	□□□□□ -2.39
URB1	YKL014C	PTP3	P40048	928 aa		0.14	□□□□□ -2.39
URB1	YKL014C	FRK1	Q03002	865 aa	Predicted RBP	0.13	□□□□□ -2.39
URB1	YKL014C	THO2	P53552	1597 aa	Known RBP	0.13	□□□□□ -2.39
URB1	YKL014C	VMA1	P17255	1071 aa	Known RBP	0.13	□□□□□ -2.39
URB1	YKL014C	SWR1	Q05471	1514 aa		0.13	□□□□□ -2.39
URB1	YKL014C	YLR422W	Q06409	1932 aa		0.13	□□□□□ -2.39
URB1	YKL014C	YLR346C	Q06139	101 aa		0.13	□□□□□ -2.39
URB1	YKL014C	YRF1-3	P0CX14	1859 aa		0.12	□□□□□ -2.39
URB1	YKL014C	YRF1-7	P0CX15	1859 aa		0.12	□□□□□ -2.39
URB1	YKL014C	YRF1-6	P53819	1859 aa		0.12	□□□□□ -2.39
URB1	YKL014C	DBP1	P24784	617 aa	Known RBP	0.12	□□□□□ -2.39
URB1	YKL014C	HKR1	P41809	1802 aa		0.12	□□□□□ -2.39
URB1	YKL014C	SAS4	Q04003	481 aa		0.12	□□□□□ -2.39
URB1	YKL014C	DNA2	P38859	1522 aa		0.12	□□□□□ -2.39
URB1	YKL014C	RRD1	P40454	393 aa	Known RBP	0.11	□□□□□ -2.39
URB1	YKL014C	ECM5	Q03214	1411 aa		0.11	□□□□□ -2.39
URB1	YKL014C	ASH1	P34233	588 aa		0.11	□□□□□ -2.39
URB1	YKL014C	YKL222C	P35995	705 aa		0.11	□□□□□ -2.39
URB1	YKL014C	YIL055C	P40523	627 aa	Known RBP	0.11	□□□□□ -2.39
URB1	YKL014C	AVT1	P47082	602 aa		0.11	□□□□□ -2.39
URB1	YKL014C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.11	□□□□□ -2.39
URB1	YKL014C	SRF1	Q12516	437 aa		0.11	□□□□□ -2.39
URB1	YKL014C	TRM1	P15565	570 aa	Known RBP	0.11	□□□□□ -2.39
URB1	YKL014C	YPR053C	Q6Q5F3	151 aa		0.11	□□□□□ -2.39
URB1	YKL014C	PDR12	Q02785	1511 aa		0.11	□□□□□ -2.39
URB1	YKL014C	SAM3	Q08986	587 aa		0.1	□□□□□ -2.39
URB1	YKL014C	NMA111	P53920	997 aa		0.09	□□□□□ -2.39
URB1	YKL014C	ALO1	P54783	526 aa	Known RBP	0.09	□□□□□ -2.39
URB1	YKL014C	SPA2	P23201	1466 aa	Known RBP	0.09	□□□□□ -2.4
URB1	YKL014C	OMA1	P36163	345 aa		0.09	□□□□□ -2.4
URB1	YKL014C	VMR1	P38735	1592 aa		0.09	□□□□□ -2.4
URB1	YKL014C	RPO31	P04051	1460 aa		0.09	□□□□□ -2.4
URB1	YKL014C	SPT21	P35209	758 aa		0.08	□□□□□ -2.4
URB1	YKL014C	NOP1	P15646	327 aa	Known RBP	0.08	□□□□□ -2.4
URB1	YKL014C	FAS2	P19097	1887 aa	Known RBP	0.08	□□□□□ -2.4
URB1	YKL014C	DNF1	P32660	1571 aa		0.08	□□□□□ -2.4
URB1	YKL014C	PDR15	Q04182	1529 aa	Known RBP	0.08	□□□□□ -2.4
URB1	YKL014C	YIR007W	P40566	764 aa		0.08	□□□□□ -2.4
URB1	YKL014C	YML122C	Q03207	126 aa		0.08	□□□□□ -2.4
URB1	YKL014C	MMS22	Q06164	1454 aa		0.08	□□□□□ -2.4
URB1	YKL014C	ECM29	P38737	1868 aa		0.08	□□□□□ -2.4
URB1	YKL014C	UBR2	Q07963	1872 aa		0.08	□□□□□ -2.4
URB1	YKL014C	AI1	P03875	834 aa		0.07	□□□□□ -2.4
URB1	YKL014C	YMR187C	Q03236	431 aa		0.07	□□□□□ -2.4
URB1	YKL014C	ACO2	P39533	789 aa		0.07	□□□□□ -2.4

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms