Protein–RNA interactions for Protein: P38737

ECM29, Proteasome component ECM29, yeastyeast

Predictions only

Length 1,868 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ECM29P38737 YML009W-BYML009W-B 477 nt23.14■■□□□ 1.29
ECM29P38737 NSR1YGR159C 1245 nt22.15■■□□□ 1.14
ECM29P38737 NOP1YDL014W 984 nt22.1■■□□□ 1.13
ECM29P38737 YKL036CYKL036C 393 nt21.27■■□□□ 1
ECM29P38737 SRX1YKL086W 384 nt19.91■□□□□ 0.78
ECM29P38737 Q0297Q0297 156 nt19.87■□□□□ 0.77
ECM29P38737 YJL027CYJL027C 417 nt19.82■□□□□ 0.76
ECM29P38737 SCS3YGL126W 1143 nt19.77■□□□□ 0.76
ECM29P38737 MDJ1YFL016C 1536 nt19.57■□□□□ 0.72
ECM29P38737 YCR051WYCR051W 669 nt18.75■□□□□ 0.59
ECM29P38737 YOL085CYOL085C 342 nt18.19■□□□□ 0.5
ECM29P38737 PKP1YIL042C 1185 nt18.12■□□□□ 0.49
ECM29P38737 SCJ1YMR214W 1134 nt17.88■□□□□ 0.45
ECM29P38737 TRN1tP(UGG)A 72 nt17.71■□□□□ 0.43
ECM29P38737 SUF9tP(UGG)F 72 nt17.71■□□□□ 0.43
ECM29P38737 SUF8tP(UGG)H 72 nt17.71■□□□□ 0.43
ECM29P38737 tP(UGG)LtP(UGG)L 72 nt17.71■□□□□ 0.43
ECM29P38737 SUF7tP(UGG)M 72 nt17.71■□□□□ 0.43
ECM29P38737 tP(UGG)N1tP(UGG)N1 72 nt17.71■□□□□ 0.43
ECM29P38737 tP(UGG)N2tP(UGG)N2 72 nt17.71■□□□□ 0.43
ECM29P38737 tP(UGG)O1tP(UGG)O1 72 nt17.71■□□□□ 0.43
ECM29P38737 SUF11tP(UGG)O2 72 nt17.71■□□□□ 0.43
ECM29P38737 RPP1BYDL130W 321 nt17.69■□□□□ 0.42
ECM29P38737 DBP2YNL112W 1641 nt17.56■□□□□ 0.4
ECM29P38737 ATS1YAL020C 1002 nt17.55■□□□□ 0.4
ECM29P38737 CCC1YLR220W 969 nt17.28■□□□□ 0.36
ECM29P38737 PET122YER153C 765 nt17.05■□□□□ 0.32
ECM29P38737 SCR1SCR1 522 nt16.86■□□□□ 0.29
ECM29P38737 tP(UGG)O3tP(UGG)O3 72 nt16.75■□□□□ 0.27
ECM29P38737 RRN5YLR141W 1092 nt16.5■□□□□ 0.23
ECM29P38737 RSB1YOR049C 1065 nt16.44■□□□□ 0.22
ECM29P38737 RVS167YDR388W 1449 nt16.38■□□□□ 0.21
ECM29P38737 RTC3YHR087W 336 nt16.37■□□□□ 0.21
ECM29P38737 YBR190WYBR190W 312 nt16.29■□□□□ 0.2
ECM29P38737 PST2YDR032C 597 nt16.2■□□□□ 0.18
ECM29P38737 YER088W-BYER088W-B 147 nt16.18■□□□□ 0.18
ECM29P38737 YDJ1YNL064C 1230 nt16.04■□□□□ 0.16
ECM29P38737 SHR5YOL110W 714 nt15.99■□□□□ 0.15
ECM29P38737 YKL097CYKL097C 411 nt15.93■□□□□ 0.14
ECM29P38737 GAR1YHR089C 618 nt15.71■□□□□ 0.11
ECM29P38737 SHU1YHL006C 453 nt15.57■□□□□ 0.08
ECM29P38737 DEP1YAL013W 1218 nt15.53■□□□□ 0.08
ECM29P38737 YOR139CYOR139C 393 nt15.39■□□□□ 0.05
ECM29P38737 URN1YPR152C 1398 nt15.37■□□□□ 0.05
ECM29P38737 YAL037C-BYAL037C-B 975 nt15.36■□□□□ 0.05
ECM29P38737 TIR1YER011W 765 nt15.12■□□□□ 0.01
ECM29P38737 SRB2YHR041C 633 nt15.02■□□□□ -0
ECM29P38737 YNL208WYNL208W 600 nt15.01□□□□□ -0.01
ECM29P38737 NPL3YDR432W 1245 nt14.95□□□□□ -0.02
ECM29P38737 RPN10YHR200W 807 nt14.94□□□□□ -0.02
ECM29P38737 SSA1YAL005C 1929 nt14.94□□□□□ -0.02
ECM29P38737 MNP1YGL068W 585 nt14.91□□□□□ -0.02
ECM29P38737 OPI9YLR338W 858 nt14.9□□□□□ -0.02
ECM29P38737 SAH1YER043C 1350 nt14.82□□□□□ -0.04
ECM29P38737 WWM1YFL010C 636 nt14.79□□□□□ -0.04
ECM29P38737 YJR120WYJR120W 351 nt14.77□□□□□ -0.05
ECM29P38737 HOM6YJR139C 1080 nt14.72□□□□□ -0.05
ECM29P38737 YOL037CYOL037C 354 nt14.66□□□□□ -0.06
ECM29P38737 YGR021WYGR021W 873 nt14.63□□□□□ -0.07
ECM29P38737 YJR018WYJR018W 363 nt14.61□□□□□ -0.07
ECM29P38737 ARE1YCR048W 1833 nt14.58□□□□□ -0.08
ECM29P38737 PUT4YOR348C 1884 nt14.54□□□□□ -0.08
ECM29P38737 YHR049C-AYHR049C-A 297 nt14.49□□□□□ -0.09
ECM29P38737 SSA3YBL075C 1950 nt14.47□□□□□ -0.09
ECM29P38737 tM(CAU)CtM(CAU)C 72 nt14.42□□□□□ -0.1
ECM29P38737 IMT4tM(CAU)E 72 nt14.42□□□□□ -0.1
ECM29P38737 IMT3tM(CAU)J3 72 nt14.42□□□□□ -0.1
ECM29P38737 IMT1tM(CAU)O1 72 nt14.42□□□□□ -0.1
ECM29P38737 IMT2tM(CAU)P 72 nt14.42□□□□□ -0.1
ECM29P38737 PUN1YLR414C 792 nt14.41□□□□□ -0.1
ECM29P38737 YFL021C-AYFL021C-A 855 nt14.39□□□□□ -0.11
ECM29P38737 RKM5YLR137W 1104 nt14.35□□□□□ -0.11
ECM29P38737 RPP2BYDR382W 333 nt14.27□□□□□ -0.12
ECM29P38737 BDH2YAL061W 1254 nt14.27□□□□□ -0.12
ECM29P38737 PUS2YGL063W 1113 nt14.26□□□□□ -0.13
ECM29P38737 YLR281CYLR281C 468 nt14.21□□□□□ -0.14
ECM29P38737 MOT3YMR070W 1473 nt14.17□□□□□ -0.14
ECM29P38737 WHI5YOR083W 888 nt14.16□□□□□ -0.14
ECM29P38737 POA1YBR022W 534 nt14.12□□□□□ -0.15
ECM29P38737 PTC2YER089C 1395 nt14.11□□□□□ -0.15
ECM29P38737 BUD23YCR047C 828 nt14.08□□□□□ -0.16
ECM29P38737 YLR236CYLR236C 324 nt14.04□□□□□ -0.16
ECM29P38737 YPR011CYPR011C 981 nt14.03□□□□□ -0.16
ECM29P38737 FIS1YIL065C 468 nt14.01□□□□□ -0.17
ECM29P38737 YBL100CYBL100C 315 nt13.97□□□□□ -0.17
ECM29P38737 NAB2YGL122C 1578 nt13.95□□□□□ -0.18
ECM29P38737 FMP45YDL222C 930 nt13.95□□□□□ -0.18
ECM29P38737 BSC6YOL137W 1494 nt13.91□□□□□ -0.18
ECM29P38737 PHO4YFR034C 939 nt13.89□□□□□ -0.19
ECM29P38737 LSM3YLR438C-A 270 nt13.89□□□□□ -0.19
ECM29P38737 YLR154C-GYLR154C-G 150 nt13.88□□□□□ -0.19
ECM29P38737 DSK2YMR276W 1122 nt13.87□□□□□ -0.19
ECM29P38737 IMP2'YIL154C 1041 nt13.87□□□□□ -0.19
ECM29P38737 RTG1YOL067C 534 nt13.79□□□□□ -0.2
ECM29P38737 TRM9YML014W 840 nt13.78□□□□□ -0.2
ECM29P38737 INM2YDR287W 879 nt13.76□□□□□ -0.21
ECM29P38737 LPX1YOR084W 1164 nt13.75□□□□□ -0.21
ECM29P38737 MRPL8YJL063C 717 nt13.72□□□□□ -0.21
ECM29P38737 DAL1YIR027C 1383 nt13.71□□□□□ -0.21
ECM29P38737 FPR4YLR449W 1179 nt13.7□□□□□ -0.22
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms