RNA–Protein interactions for RNA: YHL038C

CBP2, Required for splicing of the group I intron bI5 of the COB pre-mRNA, yeastyeast

Gene CBP2, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBP2YHL038C TY1A-AP0CX57 440 aa5.56□□□□□ -1.52
CBP2YHL038C TY1A-PR1P0CX58 440 aa5.56□□□□□ -1.52
CBP2YHL038C TY1A-ORP0CX59 440 aa5.56□□□□□ -1.52
CBP2YHL038C TY1A-PR2P0CX60 440 aa5.56□□□□□ -1.52
CBP2YHL038C TY1A-DR5P0CX65 440 aa5.56□□□□□ -1.52
CBP2YHL038C TY1A-ER2P0CX66 440 aa5.56□□□□□ -1.52
CBP2YHL038C TY1A-GR3P0CX67 440 aa5.56□□□□□ -1.52
CBP2YHL038C TY1A-LR1P0CX68 440 aa5.56□□□□□ -1.52
CBP2YHL038C TY1A-MR2P0CX69 440 aa5.56□□□□□ -1.52
CBP2YHL038C GCD11P32481 527 aaKnown RBP5.56□□□□□ -1.52
CBP2YHL038C TY1A-JR2P47099 440 aa5.56□□□□□ -1.52
CBP2YHL038C TY1A-DR1Q03856 440 aa5.56□□□□□ -1.52
CBP2YHL038C TY1A-ML1Q04706 440 aaKnown RBP5.56□□□□□ -1.52
CBP2YHL038C TY1A-BRQ12217 440 aa5.56□□□□□ -1.52
CBP2YHL038C TY1A-NL2Q12470 440 aa5.56□□□□□ -1.52
CBP2YHL038C TY1A-GR2Q12485 440 aa5.56□□□□□ -1.52
CBP2YHL038C AFT1P22149 690 aa5.55□□□□□ -1.52
CBP2YHL038C LEU3P08638 886 aa5.54□□□□□ -1.52
CBP2YHL038C SEC2P17065 759 aa5.54□□□□□ -1.52
CBP2YHL038C TRK2P28584 889 aa5.53□□□□□ -1.52
CBP2YHL038C HST3P53687 447 aa5.53□□□□□ -1.52
CBP2YHL038C TFB4Q12004 338 aa5.53□□□□□ -1.52
CBP2YHL038C MET32Q12041 191 aa5.53□□□□□ -1.52
CBP2YHL038C CAF120P53836 1060 aa5.51□□□□□ -1.53
CBP2YHL038C GAP1P19145 602 aaPredicted RBP5.5□□□□□ -1.53
CBP2YHL038C RRN7P40992 514 aa5.5□□□□□ -1.53
CBP2YHL038C TUM1Q08686 304 aaKnown RBP5.5□□□□□ -1.53
CBP2YHL038C PAT1P25644 796 aaKnown RBP5.49□□□□□ -1.53
CBP2YHL038C CSC1Q06538 782 aa5.49□□□□□ -1.53
CBP2YHL038C ACO2P39533 789 aa5.49□□□□□ -1.53
CBP2YHL038C YJR115WP47152 169 aa5.46□□□□□ -1.54
CBP2YHL038C YGR035CP53222 116 aa5.46□□□□□ -1.54
CBP2YHL038C KIC1P38692 1080 aa5.41□□□□□ -1.54
CBP2YHL038C SPB4P25808 606 aaPredicted RBP5.4□□□□□ -1.55
CBP2YHL038C SET1P38827 1080 aaKnown RBP5.4□□□□□ -1.55
CBP2YHL038C RPN1P38764 993 aaKnown RBP5.39□□□□□ -1.55
CBP2YHL038C YDR090CQ03193 310 aa5.39□□□□□ -1.55
CBP2YHL038C LSB3P43603 459 aaKnown RBP5.39□□□□□ -1.55
CBP2YHL038C ICP55P40051 511 aa5.38□□□□□ -1.55
CBP2YHL038C CKB1P43639 278 aa5.37□□□□□ -1.55
CBP2YHL038C VPS70P47161 811 aa5.37□□□□□ -1.55
CBP2YHL038C HPF1Q05164 967 aa5.37□□□□□ -1.55
CBP2YHL038C PUS1Q12211 544 aaKnown RBP5.37□□□□□ -1.55
CBP2YHL038C MOD5P07884 428 aa5.36□□□□□ -1.55
CBP2YHL038C IFH1P39520 1085 aa5.36□□□□□ -1.55
CBP2YHL038C NRD1P53617 575 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
CBP2YHL038C YLR346CQ06139 101 aa5.34□□□□□ -1.55
CBP2YHL038C OPT2Q06593 877 aa5.34□□□□□ -1.55
CBP2YHL038C MSB3P48566 633 aaPredicted RBP5.34□□□□□ -1.55
CBP2YHL038C PUS5Q06244 254 aa5.34□□□□□ -1.55
CBP2YHL038C YPR204WQ08995 1032 aa5.33□□□□□ -1.56
CBP2YHL038C YIR007WP40566 764 aa5.32□□□□□ -1.56
CBP2YHL038C YPR148CQ06523 435 aa5.32□□□□□ -1.56
CBP2YHL038C ORC6P38826 435 aa5.3□□□□□ -1.56
CBP2YHL038C DMA2P53924 522 aa5.3□□□□□ -1.56
CBP2YHL038C GLY1P37303 387 aaKnown RBP5.29□□□□□ -1.56
CBP2YHL038C PAC1P39946 494 aaKnown RBP5.29□□□□□ -1.56
CBP2YHL038C MVP1P40959 511 aaKnown RBP5.26□□□□□ -1.57
CBP2YHL038C KEX2P13134 814 aa5.26□□□□□ -1.57
CBP2YHL038C PTK2P47116 818 aaKnown RBP5.26□□□□□ -1.57
CBP2YHL038C PHM7Q12252 991 aa5.26□□□□□ -1.57
CBP2YHL038C SCW11P53189 542 aa5.25□□□□□ -1.57
CBP2YHL038C ERF2Q06551 359 aa5.25□□□□□ -1.57
CBP2YHL038C SRF1Q12516 437 aa5.25□□□□□ -1.57
CBP2YHL038C PBS2P08018 668 aa5.24□□□□□ -1.57
CBP2YHL038C YPR109WQ06104 294 aa5.24□□□□□ -1.57
CBP2YHL038C UGA3P26370 528 aa5.24□□□□□ -1.57
CBP2YHL038C DSF2P38213 736 aa5.22□□□□□ -1.57
CBP2YHL038C TY1A-BLQ12266 440 aa5.22□□□□□ -1.57
CBP2YHL038C NUP85P46673 744 aa5.2□□□□□ -1.58
CBP2YHL038C MIP1P15801 1254 aa5.2□□□□□ -1.58
CBP2YHL038C AGE1Q04412 482 aa5.2□□□□□ -1.58
CBP2YHL038C TYW1Q08960 810 aaKnown RBP5.2□□□□□ -1.58
CBP2YHL038C DPH6Q12429 685 aa5.19□□□□□ -1.58
CBP2YHL038C TUB4P53378 473 aa5.18□□□□□ -1.58
CBP2YHL038C YNR021WP53723 404 aaKnown RBP5.18□□□□□ -1.58
CBP2YHL038C MAM3Q12296 706 aa5.18□□□□□ -1.58
CBP2YHL038C SYH1Q02875 849 aaKnown RBP5.17□□□□□ -1.58
CBP2YHL038C RGR1P19263 1082 aa5.17□□□□□ -1.58
CBP2YHL038C REF2P42073 533 aaPredicted RBP5.17□□□□□ -1.58
CBP2YHL038C KIN1P13185 1064 aa5.16□□□□□ -1.58
CBP2YHL038C HGH1P48362 394 aaKnown RBP5.15□□□□□ -1.58
CBP2YHL038C RLF2Q12495 606 aa5.15□□□□□ -1.58
CBP2YHL038C MDJ1P35191 511 aa5.15□□□□□ -1.59
CBP2YHL038C IES2P40154 320 aa5.15□□□□□ -1.59
CBP2YHL038C TPD3P31383 635 aa5.14□□□□□ -1.59
CBP2YHL038C GLC3P32775 704 aa5.13□□□□□ -1.59
CBP2YHL038C CCT8P47079 568 aaKnown RBP5.11□□□□□ -1.59
CBP2YHL038C AIM7Q12156 149 aa5.11□□□□□ -1.59
CBP2YHL038C MAK21Q12176 1025 aaKnown RBP5.11□□□□□ -1.59
CBP2YHL038C KXD1P53158 218 aa5.11□□□□□ -1.59
CBP2YHL038C ATF2P53296 535 aa5.1□□□□□ -1.59
CBP2YHL038C DIT2P21595 489 aa5.09□□□□□ -1.59
CBP2YHL038C RTT106P40161 455 aa5.09□□□□□ -1.59
CBP2YHL038C NSG2P53898 299 aa5.09□□□□□ -1.59
CBP2YHL038C UBP2Q01476 1272 aa5.09□□□□□ -1.6
CBP2YHL038C COX6P00427 148 aa5.08□□□□□ -1.6
CBP2YHL038C NUP42P49686 430 aaKnown RBP5.08□□□□□ -1.6
CBP2YHL038C HXT10P43581 546 aa5.07□□□□□ -1.6
CBP2YHL038C LYS5P50113 272 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms