RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A TY1A-DR1Q03856 440 aa7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-ML1Q04706 440 aaKnown RBP7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-BRQ12217 440 aa7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-NL2Q12470 440 aa7.87□□□□□ -1.15
EFG1YGR271C-A TY1A-GR2Q12485 440 aa7.87□□□□□ -1.15
EFG1YGR271C-A CLB5P30283 435 aa7.86□□□□□ -1.15
EFG1YGR271C-A SRC1Q03707 834 aa7.85□□□□□ -1.15
EFG1YGR271C-A SEC2P17065 759 aa7.84□□□□□ -1.15
EFG1YGR271C-A AMS1P22855 1083 aa7.84□□□□□ -1.15
EFG1YGR271C-A SPB4P25808 606 aaPredicted RBP7.82□□□□□ -1.16
EFG1YGR271C-A NPL4P33755 580 aa7.82□□□□□ -1.16
EFG1YGR271C-A RAS1P01119 309 aa7.81□□□□□ -1.16
EFG1YGR271C-A MRF1P30775 413 aaPredicted RBP7.8□□□□□ -1.16
EFG1YGR271C-A DIT2P21595 489 aa7.79□□□□□ -1.16
EFG1YGR271C-A YEL077CQ3E7X8 1277 aa7.79□□□□□ -1.16
EFG1YGR271C-A SIT4P20604 311 aa7.77□□□□□ -1.17
EFG1YGR271C-A GCD11P32481 527 aaKnown RBP7.76□□□□□ -1.17
EFG1YGR271C-A RTF1P53064 558 aa7.76□□□□□ -1.17
EFG1YGR271C-A KEX2P13134 814 aa7.74□□□□□ -1.17
EFG1YGR271C-A ERF2Q06551 359 aa7.74□□□□□ -1.17
EFG1YGR271C-A TEA1P47988 759 aa7.73□□□□□ -1.17
EFG1YGR271C-A AGE1Q04412 482 aa7.72□□□□□ -1.17
EFG1YGR271C-A YNR021WP53723 404 aaKnown RBP7.71□□□□□ -1.18
EFG1YGR271C-A ERG12P07277 443 aa7.7□□□□□ -1.18
EFG1YGR271C-A NIS1P53939 407 aa7.7□□□□□ -1.18
EFG1YGR271C-A LAM6Q08001 693 aa7.7□□□□□ -1.18
EFG1YGR271C-A SPT16P32558 1035 aaKnown RBP7.69□□□□□ -1.18
EFG1YGR271C-A CST6P40535 587 aa7.69□□□□□ -1.18
EFG1YGR271C-A RRN7P40992 514 aa7.69□□□□□ -1.18
EFG1YGR271C-A YNL115CP53925 644 aa7.68□□□□□ -1.18
EFG1YGR271C-A PAT1P25644 796 aaKnown RBP7.66□□□□□ -1.18
EFG1YGR271C-A PAC1P39946 494 aaKnown RBP7.66□□□□□ -1.18
EFG1YGR271C-A MOD5P07884 428 aa7.65□□□□□ -1.18
EFG1YGR271C-A TRK1P12685 1235 aa7.65□□□□□ -1.18
EFG1YGR271C-A TUB4P53378 473 aa7.64□□□□□ -1.19
EFG1YGR271C-A FPK1P53739 893 aa7.64□□□□□ -1.19
EFG1YGR271C-A BDP1P46678 594 aa7.62□□□□□ -1.19
EFG1YGR271C-A AIM7Q12156 149 aa7.62□□□□□ -1.19
EFG1YGR271C-A HST2P53686 357 aa7.61□□□□□ -1.19
EFG1YGR271C-A LEU3P08638 886 aa7.6□□□□□ -1.19
EFG1YGR271C-A TPD3P31383 635 aa7.6□□□□□ -1.19
EFG1YGR271C-A GLC3P32775 704 aa7.6□□□□□ -1.19
EFG1YGR271C-A CLA4P48562 842 aa7.58□□□□□ -1.2
EFG1YGR271C-A ATF2P53296 535 aa7.58□□□□□ -1.2
EFG1YGR271C-A YMR196WQ04336 1088 aa7.58□□□□□ -1.2
EFG1YGR271C-A FRK1Q03002 865 aaPredicted RBP7.57□□□□□ -1.2
EFG1YGR271C-A HED1Q03937 162 aa7.56□□□□□ -1.2
EFG1YGR271C-A AIR1P40507 360 aaKnown RBP7.55□□□□□ -1.2
EFG1YGR271C-A CDC4P07834 779 aa7.54□□□□□ -1.2
EFG1YGR271C-A SLY41P22215 453 aa7.54□□□□□ -1.2
EFG1YGR271C-A PDC1P06169 563 aaKnown RBP7.52□□□□□ -1.21
EFG1YGR271C-A RRD1P40454 393 aaKnown RBP7.52□□□□□ -1.21
EFG1YGR271C-A BUB1P41695 1021 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
EFG1YGR271C-A GLN1P32288 370 aaKnown RBP7.51□□□□□ -1.21
EFG1YGR271C-A HXT10P43581 546 aa7.51□□□□□ -1.21
EFG1YGR271C-A KXD1P53158 218 aa7.51□□□□□ -1.21
EFG1YGR271C-A PUS6P53294 404 aa7.51□□□□□ -1.21
EFG1YGR271C-A MMP1Q12372 583 aa7.51□□□□□ -1.21
EFG1YGR271C-A RPA14P50106 137 aa7.5□□□□□ -1.21
EFG1YGR271C-A TRM1P15565 570 aaKnown RBP7.49□□□□□ -1.21
EFG1YGR271C-A SCJ1P25303 377 aa7.49□□□□□ -1.21
EFG1YGR271C-A KTR1P27810 393 aaKnown RBP7.48□□□□□ -1.21
EFG1YGR271C-A YPR097WQ06839 1073 aa7.48□□□□□ -1.21
EFG1YGR271C-A BRE2P43132 505 aa7.47□□□□□ -1.21
EFG1YGR271C-A MET32Q12041 191 aa7.46□□□□□ -1.22
EFG1YGR271C-A YDL206WQ12424 762 aa7.46□□□□□ -1.22
EFG1YGR271C-A ESS1P22696 170 aa7.45□□□□□ -1.22
EFG1YGR271C-A RSC30P38781 883 aa7.45□□□□□ -1.22
EFG1YGR271C-A TBF1Q02457 562 aa7.45□□□□□ -1.22
EFG1YGR271C-A PUS5Q06244 254 aa7.45□□□□□ -1.22
EFG1YGR271C-A ALR1Q08269 859 aa7.45□□□□□ -1.22
EFG1YGR271C-A TYW1Q08960 810 aaKnown RBP7.43□□□□□ -1.22
EFG1YGR271C-A AFT1P22149 690 aa7.42□□□□□ -1.22
EFG1YGR271C-A YJU3P28321 313 aa7.42□□□□□ -1.22
EFG1YGR271C-A CSN12P47130 423 aa7.41□□□□□ -1.22
EFG1YGR271C-A KIN1P13185 1064 aa7.4□□□□□ -1.22
EFG1YGR271C-A RPN1P38764 993 aaKnown RBP7.4□□□□□ -1.22
EFG1YGR271C-A GCR2Q01722 534 aa7.4□□□□□ -1.22
EFG1YGR271C-A SYH1Q02875 849 aaKnown RBP7.39□□□□□ -1.23
EFG1YGR271C-A ASH1P34233 588 aa7.37□□□□□ -1.23
EFG1YGR271C-A PKH3Q03306 898 aaPredicted RBP7.36□□□□□ -1.23
EFG1YGR271C-A MRT4P33201 236 aaKnown RBP7.35□□□□□ -1.23
EFG1YGR271C-A VAC17P25591 423 aa7.34□□□□□ -1.23
EFG1YGR271C-A SSA2P10592 639 aaKnown RBP7.33□□□□□ -1.24
EFG1YGR271C-A MSB3P48566 633 aaPredicted RBP7.33□□□□□ -1.24
EFG1YGR271C-A RAD59Q12223 238 aa7.33□□□□□ -1.24
EFG1YGR271C-A HST3P53687 447 aa7.32□□□□□ -1.24
EFG1YGR271C-A RGA1P39083 1007 aa7.31□□□□□ -1.24
EFG1YGR271C-A RTT106P40161 455 aa7.31□□□□□ -1.24
EFG1YGR271C-A ARG8P18544 423 aa7.3□□□□□ -1.24
EFG1YGR271C-A IXR1P33417 597 aa7.3□□□□□ -1.24
EFG1YGR271C-A ENV9Q08651 330 aa7.3□□□□□ -1.24
EFG1YGR271C-A KIP2P28743 706 aa7.29□□□□□ -1.24
EFG1YGR271C-A MET22P32179 357 aa7.29□□□□□ -1.24
EFG1YGR271C-A YJR115WP47152 169 aa7.28□□□□□ -1.24
EFG1YGR271C-A FIG4P42837 879 aa7.27□□□□□ -1.25
EFG1YGR271C-A GUA1P38625 525 aaKnown RBP7.26□□□□□ -1.25
EFG1YGR271C-A MAK16P10962 306 aaPredicted RBP7.25□□□□□ -1.25
EFG1YGR271C-A HPC2Q01448 625 aa7.25□□□□□ -1.25
EFG1YGR271C-A LCB5Q06147 687 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms