RNA–Protein interactions for RNA: YGL190C

CDC55, Transcript of Non-essential regulatory subunit B of protein phosphatase 2A (PP2A), yeastyeast

Gene CDC55, Length 1,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC55YGL190C RGA2Q06407 1009 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-BRQ12217 440 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-NL2Q12470 440 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-GR2Q12485 440 aa6.13□□□□□ -1.43
CDC55YGL190C SEC2P17065 759 aa6.11□□□□□ -1.43
CDC55YGL190C GYP1Q08484 637 aa6.09□□□□□ -1.43
CDC55YGL190C DPS1P04802 557 aaKnown RBP6.08□□□□□ -1.44
CDC55YGL190C ERF2Q06551 359 aa6.08□□□□□ -1.44
CDC55YGL190C PRT1P06103 763 aaKnown RBP6.07□□□□□ -1.44
CDC55YGL190C SAS4Q04003 481 aa6.06□□□□□ -1.44
CDC55YGL190C KEX2P13134 814 aa6.06□□□□□ -1.44
CDC55YGL190C CLB5P30283 435 aa6.06□□□□□ -1.44
CDC55YGL190C RAS1P01119 309 aa6.05□□□□□ -1.44
CDC55YGL190C NPL4P33755 580 aa6.05□□□□□ -1.44
CDC55YGL190C TEA1P47988 759 aa6.04□□□□□ -1.44
CDC55YGL190C NIS1P53939 407 aa6.04□□□□□ -1.44
CDC55YGL190C GCD11P32481 527 aaKnown RBP6.03□□□□□ -1.44
CDC55YGL190C YNR021WP53723 404 aaKnown RBP6.03□□□□□ -1.44
CDC55YGL190C SIT4P20604 311 aa6.02□□□□□ -1.45
CDC55YGL190C GLC3P32775 704 aa6.02□□□□□ -1.45
CDC55YGL190C SRC1Q03707 834 aa6.01□□□□□ -1.45
CDC55YGL190C AMS1P22855 1083 aa6.01□□□□□ -1.45
CDC55YGL190C AGE1Q04412 482 aa6.01□□□□□ -1.45
CDC55YGL190C LEU3P08638 886 aa5.99□□□□□ -1.45
CDC55YGL190C RRN7P40992 514 aa5.98□□□□□ -1.45
CDC55YGL190C FPK1P53739 893 aa5.98□□□□□ -1.45
CDC55YGL190C PAC1P39946 494 aaKnown RBP5.97□□□□□ -1.45
CDC55YGL190C CST6P40535 587 aa5.97□□□□□ -1.45
CDC55YGL190C RTF1P53064 558 aa5.97□□□□□ -1.45
CDC55YGL190C YNL115CP53925 644 aa5.97□□□□□ -1.45
CDC55YGL190C MRF1P30775 413 aaPredicted RBP5.96□□□□□ -1.46
CDC55YGL190C TUB4P53378 473 aa5.96□□□□□ -1.46
CDC55YGL190C ATF2P53296 535 aa5.95□□□□□ -1.46
CDC55YGL190C AIM7Q12156 149 aa5.95□□□□□ -1.46
CDC55YGL190C SPT16P32558 1035 aaKnown RBP5.94□□□□□ -1.46
CDC55YGL190C SCJ1P25303 377 aa5.93□□□□□ -1.46
CDC55YGL190C LAM6Q08001 693 aa5.93□□□□□ -1.46
CDC55YGL190C YEL077CQ3E7X8 1277 aa5.93□□□□□ -1.46
CDC55YGL190C HST2P53686 357 aa5.93□□□□□ -1.46
CDC55YGL190C MOD5P07884 428 aa5.92□□□□□ -1.46
CDC55YGL190C ERG12P07277 443 aa5.91□□□□□ -1.46
CDC55YGL190C CLA4P48562 842 aa5.91□□□□□ -1.46
CDC55YGL190C YMR196WQ04336 1088 aa5.91□□□□□ -1.46
CDC55YGL190C SLY41P22215 453 aa5.9□□□□□ -1.46
CDC55YGL190C KTR1P27810 393 aaKnown RBP5.9□□□□□ -1.46
CDC55YGL190C BDP1P46678 594 aa5.9□□□□□ -1.46
CDC55YGL190C TYW1Q08960 810 aaKnown RBP5.89□□□□□ -1.47
CDC55YGL190C ESS1P22696 170 aa5.88□□□□□ -1.47
CDC55YGL190C PAT1P25644 796 aaKnown RBP5.88□□□□□ -1.47
CDC55YGL190C FRK1Q03002 865 aaPredicted RBP5.88□□□□□ -1.47
CDC55YGL190C AIR1P40507 360 aaKnown RBP5.87□□□□□ -1.47
CDC55YGL190C MMP1Q12372 583 aa5.87□□□□□ -1.47
CDC55YGL190C YJU3P28321 313 aa5.86□□□□□ -1.47
CDC55YGL190C GLN1P32288 370 aaKnown RBP5.86□□□□□ -1.47
CDC55YGL190C KIN1P13185 1064 aa5.85□□□□□ -1.47
CDC55YGL190C PDC1P06169 563 aaKnown RBP5.84□□□□□ -1.47
CDC55YGL190C TRM1P15565 570 aaKnown RBP5.84□□□□□ -1.47
CDC55YGL190C TRK1P12685 1235 aa5.83□□□□□ -1.48
CDC55YGL190C RPN1P38764 993 aaKnown RBP5.83□□□□□ -1.48
CDC55YGL190C RSC30P38781 883 aa5.83□□□□□ -1.48
CDC55YGL190C YDL206WQ12424 762 aa5.83□□□□□ -1.48
CDC55YGL190C TPD3P31383 635 aa5.82□□□□□ -1.48
CDC55YGL190C RRD1P40454 393 aaKnown RBP5.82□□□□□ -1.48
CDC55YGL190C PUS6P53294 404 aa5.82□□□□□ -1.48
CDC55YGL190C PUS5Q06244 254 aa5.82□□□□□ -1.48
CDC55YGL190C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
CDC55YGL190C HXT10P43581 546 aa5.81□□□□□ -1.48
CDC55YGL190C CSN12P47130 423 aa5.81□□□□□ -1.48
CDC55YGL190C RPA14P50106 137 aa5.8□□□□□ -1.48
CDC55YGL190C KXD1P53158 218 aa5.8□□□□□ -1.48
CDC55YGL190C PKH3Q03306 898 aaPredicted RBP5.8□□□□□ -1.48
CDC55YGL190C YPR097WQ06839 1073 aa5.8□□□□□ -1.48
CDC55YGL190C TBF1Q02457 562 aa5.79□□□□□ -1.48
CDC55YGL190C HED1Q03937 162 aa5.79□□□□□ -1.48
CDC55YGL190C CDC4P07834 779 aa5.77□□□□□ -1.49
CDC55YGL190C GUA1P38625 525 aaKnown RBP5.77□□□□□ -1.49
CDC55YGL190C MET32Q12041 191 aa5.77□□□□□ -1.49
CDC55YGL190C ALR1Q08269 859 aa5.76□□□□□ -1.49
CDC55YGL190C RAD59Q12223 238 aa5.76□□□□□ -1.49
CDC55YGL190C ARG8P18544 423 aa5.74□□□□□ -1.49
CDC55YGL190C SSA2P10592 639 aaKnown RBP5.71□□□□□ -1.5
CDC55YGL190C VAC17P25591 423 aa5.7□□□□□ -1.5
CDC55YGL190C BRE2P43132 505 aa5.7□□□□□ -1.5
CDC55YGL190C SYH1Q02875 849 aaKnown RBP5.7□□□□□ -1.5
CDC55YGL190C AFT1P22149 690 aa5.68□□□□□ -1.5
CDC55YGL190C ASH1P34233 588 aa5.68□□□□□ -1.5
CDC55YGL190C ITT1Q04638 464 aa5.68□□□□□ -1.5
CDC55YGL190C FIG4P42837 879 aa5.67□□□□□ -1.5
CDC55YGL190C HPC2Q01448 625 aa5.67□□□□□ -1.5
CDC55YGL190C IXR1P33417 597 aa5.67□□□□□ -1.5
CDC55YGL190C MAK16P10962 306 aaPredicted RBP5.66□□□□□ -1.5
CDC55YGL190C KIP2P28743 706 aa5.66□□□□□ -1.5
CDC55YGL190C YPR084WQ06821 456 aa5.66□□□□□ -1.5
CDC55YGL190C MRT4P33201 236 aaKnown RBP5.65□□□□□ -1.5
CDC55YGL190C TFB3Q03290 321 aa5.65□□□□□ -1.5
CDC55YGL190C PKC1P24583 1151 aa5.63□□□□□ -1.51
CDC55YGL190C MSB3P48566 633 aaPredicted RBP5.63□□□□□ -1.51
CDC55YGL190C HST3P53687 447 aa5.63□□□□□ -1.51
CDC55YGL190C YJR115WP47152 169 aa5.62□□□□□ -1.51
CDC55YGL190C GCR2Q01722 534 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms