RNA–Protein interactions for RNA: YGL190C

CDC55, Transcript of Non-essential regulatory subunit B of protein phosphatase 2A (PP2A), yeastyeast

Gene CDC55, Length 1,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC55YGL190C MTC1P47018 478 aaKnown RBP11.43□□□□□ -0.58
CDC55YGL190C DRS1P32892 752 aaKnown RBP10.9□□□□□ -0.66
CDC55YGL190C FAP1P53971 965 aa9.92□□□□□ -0.82
CDC55YGL190C PRI1P10363 409 aa9.5□□□□□ -0.89
CDC55YGL190C DIP2Q12220 943 aaPredicted RBP9.46□□□□□ -0.89
CDC55YGL190C AAD16Q02895 342 aa9.37□□□□□ -0.91
CDC55YGL190C ISW2Q08773 1120 aa9.35□□□□□ -0.91
CDC55YGL190C PRY3P47033 881 aa9.34□□□□□ -0.91
CDC55YGL190C RPG1P38249 964 aaKnown RBP9.29□□□□□ -0.92
CDC55YGL190C AVT3P36062 692 aa9.25□□□□□ -0.93
CDC55YGL190C BFR2Q06631 534 aaKnown RBP9.17□□□□□ -0.94
CDC55YGL190C RSE1Q04693 1361 aaKnown RBP9.06□□□□□ -0.96
CDC55YGL190C YCK3P39962 524 aa8.98□□□□□ -0.97
CDC55YGL190C TSR3Q12094 313 aaKnown RBP8.98□□□□□ -0.97
CDC55YGL190C RPL17AP05740 184 aaKnown RBP8.78□□□□□ -1
CDC55YGL190C RPL17BP46990 184 aaKnown RBP8.78□□□□□ -1
CDC55YGL190C HAA1Q12753 694 aaKnown RBP8.76□□□□□ -1.01
CDC55YGL190C REB1P21538 810 aa8.67□□□□□ -1.02
CDC55YGL190C MRPL32P25348 183 aa8.56□□□□□ -1.04
CDC55YGL190C SPT21P35209 758 aa8.49□□□□□ -1.05
CDC55YGL190C YKR023WP36119 530 aaKnown RBP8.33□□□□□ -1.08
CDC55YGL190C TFA1P36100 482 aa8.3□□□□□ -1.08
CDC55YGL190C CDC27P38042 758 aa8.29□□□□□ -1.08
CDC55YGL190C RIM101P33400 625 aa8.22□□□□□ -1.09
CDC55YGL190C YGL015CP33199 130 aa8.14□□□□□ -1.11
CDC55YGL190C HOP09932 586 aa8.13□□□□□ -1.11
CDC55YGL190C TFC8Q12308 588 aa8.13□□□□□ -1.11
CDC55YGL190C DCD1P06773 312 aa8.11□□□□□ -1.11
CDC55YGL190C OXP1P28273 1286 aa7.98□□□□□ -1.13
CDC55YGL190C MAP2P38174 421 aaKnown RBP7.97□□□□□ -1.13
CDC55YGL190C UBP10P53874 792 aaPredicted RBP7.96□□□□□ -1.14
CDC55YGL190C BCH2P36122 765 aa7.88□□□□□ -1.15
CDC55YGL190C SCY1P53009 804 aa7.84□□□□□ -1.15
CDC55YGL190C PTP3P40048 928 aa7.75□□□□□ -1.17
CDC55YGL190C YIL055CP40523 627 aaKnown RBP7.74□□□□□ -1.17
CDC55YGL190C YAH1Q12184 172 aaKnown RBP7.71□□□□□ -1.17
CDC55YGL190C SLX5P32828 619 aaKnown RBP7.69□□□□□ -1.18
CDC55YGL190C EPS1P40557 701 aa7.69□□□□□ -1.18
CDC55YGL190C RSM7P47150 247 aa7.67□□□□□ -1.18
CDC55YGL190C BUD31P25337 157 aaPredicted RBP7.66□□□□□ -1.18
CDC55YGL190C BDF1P35817 686 aa7.66□□□□□ -1.18
CDC55YGL190C YLR271WQ06152 274 aa7.64□□□□□ -1.19
CDC55YGL190C AI2P03876 854 aa7.6□□□□□ -1.19
CDC55YGL190C SSP1P38871 571 aa7.58□□□□□ -1.2
CDC55YGL190C TIF4632P39936 914 aaKnown RBP7.57□□□□□ -1.2
CDC55YGL190C TGL3P40308 642 aa7.57□□□□□ -1.2
CDC55YGL190C BBC1P47068 1157 aa7.53□□□□□ -1.2
CDC55YGL190C PSD2P53037 1138 aaKnown RBP7.5□□□□□ -1.21
CDC55YGL190C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
CDC55YGL190C CST9Q06032 482 aa7.4□□□□□ -1.22
CDC55YGL190C NSR1P27476 414 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
CDC55YGL190C MGA2P40578 1113 aa7.35□□□□□ -1.23
CDC55YGL190C MRM1P25270 412 aa7.34□□□□□ -1.23
CDC55YGL190C MST1P07236 462 aa7.33□□□□□ -1.24
CDC55YGL190C YAP5P40574 245 aa7.26□□□□□ -1.25
CDC55YGL190C YOR238WQ08634 303 aa7.26□□□□□ -1.25
CDC55YGL190C RCR1P38212 213 aa7.22□□□□□ -1.25
CDC55YGL190C VPS29P38759 282 aa7.21□□□□□ -1.25
CDC55YGL190C UBP9P39967 754 aa7.2□□□□□ -1.26
CDC55YGL190C RTG3P38165 486 aa7.17□□□□□ -1.26
CDC55YGL190C PIB1Q06651 286 aa7.16□□□□□ -1.26
CDC55YGL190C YBL029C-AQ3E756 94 aa7.16□□□□□ -1.26
CDC55YGL190C STS1P38637 319 aa7.13□□□□□ -1.27
CDC55YGL190C YMR1P47147 688 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
CDC55YGL190C DBP1P24784 617 aaKnown RBP7.1□□□□□ -1.27
CDC55YGL190C YFR006WP43590 535 aa7.1□□□□□ -1.27
CDC55YGL190C VNX1P42839 908 aa7.09□□□□□ -1.27
CDC55YGL190C WSC3Q12215 556 aa7.07□□□□□ -1.28
CDC55YGL190C RAM2P29703 316 aa7.05□□□□□ -1.28
CDC55YGL190C GTT3P39996 337 aa7.05□□□□□ -1.28
CDC55YGL190C SIS1P25294 352 aaKnown RBP7.04□□□□□ -1.28
CDC55YGL190C VMA1P17255 1071 aaKnown RBP7.02□□□□□ -1.29
CDC55YGL190C SPP1Q03012 353 aa6.99□□□□□ -1.29
CDC55YGL190C TIF11P38912 153 aaKnown RBP6.97□□□□□ -1.29
CDC55YGL190C YOL036WQ08206 761 aa6.97□□□□□ -1.29
CDC55YGL190C SAM3Q08986 587 aa6.97□□□□□ -1.29
CDC55YGL190C MAK11P20484 414 aaKnown RBP6.95□□□□□ -1.3
CDC55YGL190C SET4P42948 560 aa6.94□□□□□ -1.3
CDC55YGL190C MSB4Q12317 492 aa6.94□□□□□ -1.3
CDC55YGL190C EDS1P38073 919 aa6.91□□□□□ -1.3
CDC55YGL190C IOC2Q12072 812 aa6.91□□□□□ -1.3
CDC55YGL190C ULI1P43604 169 aa6.9□□□□□ -1.31
CDC55YGL190C TRP5P00931 707 aaKnown RBP6.86□□□□□ -1.31
CDC55YGL190C COQ8P27697 501 aa6.86□□□□□ -1.31
CDC55YGL190C LDB19Q12502 818 aa6.86□□□□□ -1.31
CDC55YGL190C MIF2P35201 549 aa6.86□□□□□ -1.31
CDC55YGL190C FKH1P40466 484 aa6.86□□□□□ -1.31
CDC55YGL190C EAP1P36041 632 aaKnown RBP6.85□□□□□ -1.31
CDC55YGL190C GYP5Q12344 894 aa6.85□□□□□ -1.31
CDC55YGL190C AIR2Q12476 344 aaKnown RBP6.84□□□□□ -1.31
CDC55YGL190C PTC3P34221 468 aaKnown RBP6.83□□□□□ -1.32
CDC55YGL190C DCW1P36091 449 aa6.79□□□□□ -1.32
CDC55YGL190C ABP1P15891 592 aaKnown RBP6.78□□□□□ -1.32
CDC55YGL190C GRE2Q12068 342 aaKnown RBP6.78□□□□□ -1.32
CDC55YGL190C HTA1P04911 132 aaKnown RBP6.77□□□□□ -1.33
CDC55YGL190C HTA2P04912 132 aa6.77□□□□□ -1.33
CDC55YGL190C RTG1P32607 177 aa6.77□□□□□ -1.33
CDC55YGL190C DAN4P47179 1161 aa6.77□□□□□ -1.33
CDC55YGL190C YNL035CP53962 389 aaKnown RBP6.75□□□□□ -1.33
CDC55YGL190C GUT1P32190 709 aa6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms