RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeastyeast

Gene CMD1, Length 444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMD1YBR109C TY1A-GR3P0CX67 440 aa6.84□□□□□ -1.31
CMD1YBR109C TY1A-LR1P0CX68 440 aa6.84□□□□□ -1.31
CMD1YBR109C TY1A-MR2P0CX69 440 aa6.84□□□□□ -1.31
CMD1YBR109C TY1A-JR2P47099 440 aa6.84□□□□□ -1.31
CMD1YBR109C TY1A-DR1Q03856 440 aa6.84□□□□□ -1.31
CMD1YBR109C TY1A-ML1Q04706 440 aaKnown RBP6.84□□□□□ -1.31
CMD1YBR109C TY1A-BRQ12217 440 aa6.84□□□□□ -1.31
CMD1YBR109C TY1A-NL2Q12470 440 aa6.84□□□□□ -1.31
CMD1YBR109C TY1A-GR2Q12485 440 aa6.84□□□□□ -1.31
CMD1YBR109C GAP1P19145 602 aaPredicted RBP6.83□□□□□ -1.32
CMD1YBR109C TFB4Q12004 338 aa6.83□□□□□ -1.32
CMD1YBR109C SEC2P17065 759 aa6.82□□□□□ -1.32
CMD1YBR109C NPL4P33755 580 aa6.82□□□□□ -1.32
CMD1YBR109C GCD11P32481 527 aaKnown RBP6.8□□□□□ -1.32
CMD1YBR109C CSC1Q06538 782 aa6.79□□□□□ -1.32
CMD1YBR109C TUM1Q08686 304 aaKnown RBP6.79□□□□□ -1.32
CMD1YBR109C ASH1P34233 588 aa6.77□□□□□ -1.33
CMD1YBR109C AFT1P22149 690 aa6.76□□□□□ -1.33
CMD1YBR109C RRD1P40454 393 aaKnown RBP6.76□□□□□ -1.33
CMD1YBR109C RRN7P40992 514 aa6.75□□□□□ -1.33
CMD1YBR109C MET32Q12041 191 aa6.75□□□□□ -1.33
CMD1YBR109C PAT1P25644 796 aaKnown RBP6.73□□□□□ -1.33
CMD1YBR109C YDR090CQ03193 310 aa6.73□□□□□ -1.33
CMD1YBR109C HST3P53687 447 aa6.71□□□□□ -1.34
CMD1YBR109C KIC1P38692 1080 aa6.7□□□□□ -1.34
CMD1YBR109C TRK2P28584 889 aa6.66□□□□□ -1.34
CMD1YBR109C SET1P38827 1080 aaKnown RBP6.66□□□□□ -1.34
CMD1YBR109C ACO2P39533 789 aa6.66□□□□□ -1.34
CMD1YBR109C CAF120P53836 1060 aa6.66□□□□□ -1.34
CMD1YBR109C YJR115WP47152 169 aa6.65□□□□□ -1.34
CMD1YBR109C ORC6P38826 435 aa6.61□□□□□ -1.35
CMD1YBR109C MOD5P07884 428 aa6.6□□□□□ -1.35
CMD1YBR109C IFH1P39520 1085 aa6.6□□□□□ -1.35
CMD1YBR109C YGR035CP53222 116 aa6.59□□□□□ -1.35
CMD1YBR109C PUS5Q06244 254 aa6.55□□□□□ -1.36
CMD1YBR109C MVP1P40959 511 aaKnown RBP6.54□□□□□ -1.36
CMD1YBR109C MSB3P48566 633 aaPredicted RBP6.54□□□□□ -1.36
CMD1YBR109C PAC1P39946 494 aaKnown RBP6.53□□□□□ -1.36
CMD1YBR109C OPT2Q06593 877 aa6.52□□□□□ -1.37
CMD1YBR109C SAS10Q12136 610 aaPredicted RBP6.52□□□□□ -1.37
CMD1YBR109C HPF1Q05164 967 aa6.51□□□□□ -1.37
CMD1YBR109C YPR109WQ06104 294 aa6.51□□□□□ -1.37
CMD1YBR109C KEX2P13134 814 aa6.5□□□□□ -1.37
CMD1YBR109C ERF2Q06551 359 aa6.5□□□□□ -1.37
CMD1YBR109C YLR346CQ06139 101 aa6.49□□□□□ -1.37
CMD1YBR109C ICP55P40051 511 aa6.47□□□□□ -1.37
CMD1YBR109C YIR007WP40566 764 aa6.46□□□□□ -1.38
CMD1YBR109C LSB3P43603 459 aaKnown RBP6.46□□□□□ -1.38
CMD1YBR109C RGR1P19263 1082 aa6.45□□□□□ -1.38
CMD1YBR109C GLY1P37303 387 aaKnown RBP6.45□□□□□ -1.38
CMD1YBR109C AGE1Q04412 482 aa6.45□□□□□ -1.38
CMD1YBR109C REF2P42073 533 aaPredicted RBP6.44□□□□□ -1.38
CMD1YBR109C YPR204WQ08995 1032 aa6.44□□□□□ -1.38
CMD1YBR109C PUS1Q12211 544 aaKnown RBP6.44□□□□□ -1.38
CMD1YBR109C PTK2P47116 818 aaKnown RBP6.43□□□□□ -1.38
CMD1YBR109C TUB4P53378 473 aa6.41□□□□□ -1.38
CMD1YBR109C UGA3P26370 528 aa6.4□□□□□ -1.38
CMD1YBR109C NRD1P53617 575 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
CMD1YBR109C SRF1Q12516 437 aa6.4□□□□□ -1.38
CMD1YBR109C SCW11P53189 542 aa6.39□□□□□ -1.39
CMD1YBR109C TY1A-BLQ12266 440 aa6.38□□□□□ -1.39
CMD1YBR109C NUP85P46673 744 aa6.37□□□□□ -1.39
CMD1YBR109C TPD3P31383 635 aa6.36□□□□□ -1.39
CMD1YBR109C SYH1Q02875 849 aaKnown RBP6.36□□□□□ -1.39
CMD1YBR109C LEU3P08638 886 aa6.35□□□□□ -1.39
CMD1YBR109C YPR148CQ06523 435 aa6.35□□□□□ -1.39
CMD1YBR109C TYW1Q08960 810 aaKnown RBP6.35□□□□□ -1.39
CMD1YBR109C MAK21Q12176 1025 aaKnown RBP6.35□□□□□ -1.39
CMD1YBR109C PHM7Q12252 991 aa6.35□□□□□ -1.39
CMD1YBR109C COX6P00427 148 aa6.34□□□□□ -1.39
CMD1YBR109C MIP1P15801 1254 aa6.34□□□□□ -1.39
CMD1YBR109C LEO1P38439 464 aa6.33□□□□□ -1.4
CMD1YBR109C VPS70P47161 811 aa6.31□□□□□ -1.4
CMD1YBR109C KXD1P53158 218 aa6.31□□□□□ -1.4
CMD1YBR109C DPH6Q12429 685 aa6.31□□□□□ -1.4
CMD1YBR109C RTF1P53064 558 aa6.3□□□□□ -1.4
CMD1YBR109C HXT10P43581 546 aa6.28□□□□□ -1.4
CMD1YBR109C CKB1P43639 278 aa6.28□□□□□ -1.4
CMD1YBR109C RTT106P40161 455 aa6.27□□□□□ -1.41
CMD1YBR109C MRT4P33201 236 aaKnown RBP6.24□□□□□ -1.41
CMD1YBR109C MDJ1P35191 511 aa6.23□□□□□ -1.41
CMD1YBR109C YNL115CP53925 644 aa6.23□□□□□ -1.41
CMD1YBR109C PDC1P06169 563 aaKnown RBP6.22□□□□□ -1.41
CMD1YBR109C SPB4P25808 606 aaPredicted RBP6.22□□□□□ -1.41
CMD1YBR109C UBP2Q01476 1272 aa6.22□□□□□ -1.41
CMD1YBR109C LSC2P53312 427 aa6.21□□□□□ -1.42
CMD1YBR109C CLB5P30283 435 aa6.2□□□□□ -1.42
CMD1YBR109C ROG3P43602 733 aa6.2□□□□□ -1.42
CMD1YBR109C KIP2P28743 706 aa6.18□□□□□ -1.42
CMD1YBR109C CCT8P47079 568 aaKnown RBP6.18□□□□□ -1.42
CMD1YBR109C LYS5P50113 272 aa6.18□□□□□ -1.42
CMD1YBR109C TY1A-MR1Q04215 440 aa6.18□□□□□ -1.42
CMD1YBR109C DSF2P38213 736 aa6.17□□□□□ -1.42
CMD1YBR109C NSG2P53898 299 aa6.17□□□□□ -1.42
CMD1YBR109C CCP1P00431 361 aa6.16□□□□□ -1.42
CMD1YBR109C PBS2P08018 668 aa6.16□□□□□ -1.42
CMD1YBR109C PSE1P32337 1089 aaKnown RBP6.16□□□□□ -1.42
CMD1YBR109C JJJ3P47138 172 aa6.16□□□□□ -1.42
CMD1YBR109C ARG82P07250 355 aa6.15□□□□□ -1.42
CMD1YBR109C RPN1P38764 993 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms