RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 CD109Q6YHK3 1445 aa12.42□□□□□ -0.42
CNEP1R1-204ENST00000562576 ADAMTSL3P82987 1691 aa12.42□□□□□ -0.42
CNEP1R1-204ENST00000562576 PCF11O94913 1555 aaKnown RBP12.4□□□□□ -0.42
CNEP1R1-204ENST00000562576 RAPGEF3O95398 923 aa12.39□□□□□ -0.43
CNEP1R1-204ENST00000562576 CARMIL1Q5VZK9 1371 aa12.38□□□□□ -0.43
CNEP1R1-204ENST00000562576 WDR7Q9Y4E6 1490 aa12.38□□□□□ -0.43
CNEP1R1-204ENST00000562576 MAGI3Q5TCQ9 1506 aa12.37□□□□□ -0.43
CNEP1R1-204ENST00000562576 ARID3CA6NKF2 412 aa12.36□□□□□ -0.43
CNEP1R1-204ENST00000562576 IQGAP2Q13576 1575 aa12.35□□□□□ -0.43
CNEP1R1-204ENST00000562576 MADDQ8WXG6 1647 aa12.35□□□□□ -0.43
CNEP1R1-204ENST00000562576 ARID4BQ4LE39 1312 aaPredicted RBP12.34□□□□□ -0.43
CNEP1R1-204ENST00000562576 HAX1O00165 279 aa12.33□□□□□ -0.44
CNEP1R1-204ENST00000562576 KIF27Q86VH2 1401 aa12.33□□□□□ -0.44
CNEP1R1-204ENST00000562576 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
CNEP1R1-204ENST00000562576 MKRN4PQ13434 485 aaPredicted RBP12.3□□□□□ -0.44
CNEP1R1-204ENST00000562576 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
CNEP1R1-204ENST00000562576 BCORL1Q5H9F3 1711 aa12.3□□□□□ -0.44
CNEP1R1-204ENST00000562576 ARAP3Q8WWN8 1544 aa12.3□□□□□ -0.44
CNEP1R1-204ENST00000562576 CFAP43Q8NDM7 1665 aa12.29□□□□□ -0.44
CNEP1R1-204ENST00000562576 RIMS1Q86UR5 1692 aaKnown RBP12.29□□□□□ -0.44
CNEP1R1-204ENST00000562576 SPATA31D1Q6ZQQ2 1576 aa12.28□□□□□ -0.44
CNEP1R1-204ENST00000562576 SSUH2Q9Y2M2 353 aa12.27□□□□□ -0.45
CNEP1R1-204ENST00000562576 UGGT2Q9NYU1 1516 aa12.27□□□□□ -0.45
CNEP1R1-204ENST00000562576 KIAA0556O60303 1618 aa12.26□□□□□ -0.45
CNEP1R1-204ENST00000562576 FRMPD1Q5SYB0 1578 aa12.24□□□□□ -0.45
CNEP1R1-204ENST00000562576 MLECQ14165 292 aa12.23□□□□□ -0.45
CNEP1R1-204ENST00000562576 CLEC11AQ9Y240 323 aa12.23□□□□□ -0.45
CNEP1R1-204ENST00000562576 SIGLEC1Q9BZZ2 1709 aa12.23□□□□□ -0.45
CNEP1R1-204ENST00000562576 ABCA8O94911 1581 aa12.22□□□□□ -0.45
CNEP1R1-204ENST00000562576 CEBPAP49715 358 aaPredicted RBP12.21□□□□□ -0.45
CNEP1R1-204ENST00000562576 P3H3Q8IVL6 736 aa12.19□□□□□ -0.46
CNEP1R1-204ENST00000562576 ATP10BO94823 1461 aa12.19□□□□□ -0.46
CNEP1R1-204ENST00000562576 PRKAR2AP13861 404 aaKnown RBP12.17□□□□□ -0.46
CNEP1R1-204ENST00000562576 STRCQ7RTU9 1775 aa12.16□□□□□ -0.46
CNEP1R1-204ENST00000562576 YEATS2Q9ULM3 1422 aa12.15□□□□□ -0.46
CNEP1R1-204ENST00000562576 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
CNEP1R1-204ENST00000562576 ABCA9Q8IUA7 1624 aa12.13□□□□□ -0.47
CNEP1R1-204ENST00000562576 PHLDB1Q86UU1 1377 aa12.12□□□□□ -0.47
CNEP1R1-204ENST00000562576 ARHGEF40Q8TER5 1519 aa12.11□□□□□ -0.47
CNEP1R1-204ENST00000562576 NEO1Q92859 1461 aa12.11□□□□□ -0.47
CNEP1R1-204ENST00000562576 CSRNP3Q8WYN3 585 aa12.1□□□□□ -0.47
CNEP1R1-204ENST00000562576 LTBP4Q8N2S1 1624 aa12.08□□□□□ -0.48
CNEP1R1-204ENST00000562576 RICTORQ6R327 1708 aa12.08□□□□□ -0.48
CNEP1R1-204ENST00000562576 DENND4BO75064 1496 aaPredicted RBP12.08□□□□□ -0.48
CNEP1R1-204ENST00000562576 AKNAQ7Z591 1439 aa12.06□□□□□ -0.48
CNEP1R1-204ENST00000562576 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
CNEP1R1-204ENST00000562576 FHOD3Q2V2M9 1422 aa12.05□□□□□ -0.48
CNEP1R1-204ENST00000562576 EVX2Q03828 476 aa12.05□□□□□ -0.48
CNEP1R1-204ENST00000562576 FER1L4A9Z1Z3 1794 aa12.05□□□□□ -0.48
CNEP1R1-204ENST00000562576 TTC37Q6PGP7 1564 aa12.05□□□□□ -0.48
CNEP1R1-204ENST00000562576 POGZQ7Z3K3 1410 aa12.04□□□□□ -0.48
CNEP1R1-204ENST00000562576 FANCAO15360 1455 aa12.04□□□□□ -0.48
CNEP1R1-204ENST00000562576 GOLGA3Q08378 1498 aa12.04□□□□□ -0.48
CNEP1R1-204ENST00000562576 PREX1Q8TCU6 1659 aa12.03□□□□□ -0.48
CNEP1R1-204ENST00000562576 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
CNEP1R1-204ENST00000562576 UBAP1LF5GYI3 381 aa12.03□□□□□ -0.48
CNEP1R1-204ENST00000562576 ZFYVE16Q7Z3T8 1539 aa12.02□□□□□ -0.48
CNEP1R1-204ENST00000562576 ARHGEF12Q9NZN5 1544 aa12.01□□□□□ -0.49
CNEP1R1-204ENST00000562576 HECW1Q76N89 1606 aa12.01□□□□□ -0.49
CNEP1R1-204ENST00000562576 CTTNBP2Q8WZ74 1663 aa12.01□□□□□ -0.49
CNEP1R1-204ENST00000562576 PTPRTO14522 1441 aa12.01□□□□□ -0.49
CNEP1R1-204ENST00000562576 ZNF335Q9H4Z2 1342 aaPredicted RBP12□□□□□ -0.49
CNEP1R1-204ENST00000562576 HSPA1LP34931 641 aa11.99□□□□□ -0.49
CNEP1R1-204ENST00000562576 ZMYM4Q5VZL5 1548 aa11.98□□□□□ -0.49
CNEP1R1-204ENST00000562576 NCKAP5LQ9HCH0 1330 aa11.98□□□□□ -0.49
CNEP1R1-204ENST00000562576 RANGAP1P46060 587 aaPredicted RBP11.98□□□□□ -0.49
CNEP1R1-204ENST00000562576 UHRF1BP1Q6BDS2 1440 aa11.97□□□□□ -0.49
CNEP1R1-204ENST00000562576 NUP153P49790 1475 aaKnown RBP11.96□□□□□ -0.49
CNEP1R1-204ENST00000562576 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.96□□□□□ -0.5
CNEP1R1-204ENST00000562576 SCAPERQ9BY12 1400 aa11.95□□□□□ -0.5
CNEP1R1-204ENST00000562576 CHADLQ6NUI6 762 aa11.95□□□□□ -0.5
CNEP1R1-204ENST00000562576 MED1Q15648 1581 aaPredicted RBP11.95□□□□□ -0.5
CNEP1R1-204ENST00000562576 EFCAB5A4FU69 1503 aa11.95□□□□□ -0.5
CNEP1R1-204ENST00000562576 ATP10AO60312 1499 aa11.95□□□□□ -0.5
CNEP1R1-204ENST00000562576 RAPGEF6Q8TEU7 1601 aa11.94□□□□□ -0.5
CNEP1R1-204ENST00000562576 PLEKHD1A6NEE1 506 aa11.93□□□□□ -0.5
CNEP1R1-204ENST00000562576 PIP4K2BP78356 416 aa11.93□□□□□ -0.5
CNEP1R1-204ENST00000562576 NCOA1Q15788 1441 aa11.93□□□□□ -0.5
CNEP1R1-204ENST00000562576 IQSEC2Q5JU85 1478 aa11.92□□□□□ -0.5
CNEP1R1-204ENST00000562576 MAGI2Q86UL8 1455 aa11.92□□□□□ -0.5
CNEP1R1-204ENST00000562576 AFAP1Q8N556 730 aa11.92□□□□□ -0.5
CNEP1R1-204ENST00000562576 C9orf84Q5VXU9 1444 aa11.91□□□□□ -0.5
CNEP1R1-204ENST00000562576 PRXQ9BXM0 1461 aa11.9□□□□□ -0.5
CNEP1R1-204ENST00000562576 C3P01024 1663 aa11.9□□□□□ -0.5
CNEP1R1-204ENST00000562576 SETD1BQ9UPS6 1966 aaKnown RBP11.87□□□□□ -0.51
CNEP1R1-204ENST00000562576 CAMSAP1Q5T5Y3 1602 aa11.87□□□□□ -0.51
CNEP1R1-204ENST00000562576 GABBR2O75899 941 aa11.87□□□□□ -0.51
CNEP1R1-204ENST00000562576 TRAPPC8Q9Y2L5 1435 aa11.86□□□□□ -0.51
CNEP1R1-204ENST00000562576 FAM9AQ8IZU1 332 aaPredicted RBP11.86□□□□□ -0.51
CNEP1R1-204ENST00000562576 RGS17Q9UGC6 210 aaPredicted RBP11.86□□□□□ -0.51
CNEP1R1-204ENST00000562576 SAMD9Q5K651 1589 aa11.86□□□□□ -0.51
CNEP1R1-204ENST00000562576 PLCH2O75038 1416 aa11.86□□□□□ -0.51
CNEP1R1-204ENST00000562576 CFAP74Q9C0B2 1584 aa11.85□□□□□ -0.51
CNEP1R1-204ENST00000562576 STAG3Q9UJ98 1225 aa11.85□□□□□ -0.51
CNEP1R1-204ENST00000562576 MYT1LQ9UL68 1186 aa11.85□□□□□ -0.51
CNEP1R1-204ENST00000562576 CDK13Q14004 1512 aaKnown RBP11.83□□□□□ -0.52
CNEP1R1-204ENST00000562576 CLCN6P51797 869 aa11.83□□□□□ -0.52
CNEP1R1-204ENST00000562576 EHMT2Q96KQ7 1210 aa11.83□□□□□ -0.52
CNEP1R1-204ENST00000562576 FARP1Q9Y4F1 1045 aaPredicted RBP11.83□□□□□ -0.52
CNEP1R1-204ENST00000562576 DIP2CQ9Y2E4 1556 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms