RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 AEBP2Q6ZN18 517 aaPredicted RBP22.93■■□□□ 1.26
CNEP1R1-204ENST00000562576 CHIC1Q5VXU3 224 aa21.76■■□□□ 1.07
CNEP1R1-204ENST00000562576 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
CNEP1R1-204ENST00000562576 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
CNEP1R1-204ENST00000562576 FOXD1Q16676 465 aa18.29■□□□□ 0.52
CNEP1R1-204ENST00000562576 NISCHQ9Y2I1 1504 aa17.93■□□□□ 0.46
CNEP1R1-204ENST00000562576 PLPPR3Q6T4P5 718 aa17.39■□□□□ 0.37
CNEP1R1-204ENST00000562576 MSH5O43196 834 aa17.29■□□□□ 0.36
CNEP1R1-204ENST00000562576 PIAS4Q8N2W9 510 aaPredicted RBP17.09■□□□□ 0.33
CNEP1R1-204ENST00000562576 ABCC9O60706 1549 aa17.03■□□□□ 0.32
CNEP1R1-204ENST00000562576 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
CNEP1R1-204ENST00000562576 POTEDQ86YR6 584 aa16.96■□□□□ 0.31
CNEP1R1-204ENST00000562576 ADRA2BP18089 450 aa16.92■□□□□ 0.3
CNEP1R1-204ENST00000562576 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
CNEP1R1-204ENST00000562576 CCDC180Q9P1Z9 1646 aa16.18■□□□□ 0.18
CNEP1R1-204ENST00000562576 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
CNEP1R1-204ENST00000562576 RB1CC1Q8TDY2 1594 aa15.75■□□□□ 0.11
CNEP1R1-204ENST00000562576 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
CNEP1R1-204ENST00000562576 DMRT2Q9Y5R5 561 aa15.59■□□□□ 0.09
CNEP1R1-204ENST00000562576 DCAF8L2P0C7V8 631 aa15.58■□□□□ 0.08
CNEP1R1-204ENST00000562576 DNAJC5Q9H3Z4 198 aa15.57■□□□□ 0.08
CNEP1R1-204ENST00000562576 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
CNEP1R1-204ENST00000562576 NACADO15069 1562 aa15.49■□□□□ 0.07
CNEP1R1-204ENST00000562576 UNC13AQ9UPW8 1703 aa15.48■□□□□ 0.07
CNEP1R1-204ENST00000562576 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
CNEP1R1-204ENST00000562576 CECR2Q9BXF3 1484 aa15.33■□□□□ 0.04
CNEP1R1-204ENST00000562576 CC2D2AQ9P2K1 1620 aa15.27■□□□□ 0.03
CNEP1R1-204ENST00000562576 PPP4R3CPQ6ZMV5 832 aa15.18■□□□□ 0.02
CNEP1R1-204ENST00000562576 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
CNEP1R1-204ENST00000562576 MYO15BQ96JP2 1530 aa15.01□□□□□ -0.01
CNEP1R1-204ENST00000562576 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
CNEP1R1-204ENST00000562576 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
CNEP1R1-204ENST00000562576 DCAF8L1A6NGE4 600 aa14.92□□□□□ -0.02
CNEP1R1-204ENST00000562576 SCRIBQ14160 1630 aa14.91□□□□□ -0.02
CNEP1R1-204ENST00000562576 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
CNEP1R1-204ENST00000562576 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
CNEP1R1-204ENST00000562576 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
CNEP1R1-204ENST00000562576 CUX2O14529 1486 aa14.73□□□□□ -0.05
CNEP1R1-204ENST00000562576 TRIM41Q8WV44 630 aa14.72□□□□□ -0.05
CNEP1R1-204ENST00000562576 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
CNEP1R1-204ENST00000562576 RNF39Q9H2S5 420 aa14.67□□□□□ -0.06
CNEP1R1-204ENST00000562576 NCBP3Q53F19 620 aaKnown RBP14.66□□□□□ -0.06
CNEP1R1-204ENST00000562576 DCAF1Q9Y4B6 1507 aa14.63□□□□□ -0.07
CNEP1R1-204ENST00000562576 ERCC6Q03468 1493 aa14.63□□□□□ -0.07
CNEP1R1-204ENST00000562576 C1QBPQ07021 282 aaKnown RBP14.52□□□□□ -0.09
CNEP1R1-204ENST00000562576 NESP48681 1621 aa14.51□□□□□ -0.09
CNEP1R1-204ENST00000562576 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
CNEP1R1-204ENST00000562576 THOC2Q8NI27 1593 aaKnown RBP14.32□□□□□ -0.12
CNEP1R1-204ENST00000562576 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
CNEP1R1-204ENST00000562576 ATAD2BQ9ULI0 1458 aa14.3□□□□□ -0.12
CNEP1R1-204ENST00000562576 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.28□□□□□ -0.12
CNEP1R1-204ENST00000562576 SMARCA2P51531 1590 aa14.25□□□□□ -0.13
CNEP1R1-204ENST00000562576 KIF21AQ7Z4S6 1674 aa14.17□□□□□ -0.14
CNEP1R1-204ENST00000562576 HMGXB3Q12766 1538 aa14.13□□□□□ -0.15
CNEP1R1-204ENST00000562576 SMARCA4P51532 1647 aa14.08□□□□□ -0.15
CNEP1R1-204ENST00000562576 BAZ1BQ9UIG0 1483 aaKnown RBP14.07□□□□□ -0.16
CNEP1R1-204ENST00000562576 OSCARQ8IYS5 282 aa14.07□□□□□ -0.16
CNEP1R1-204ENST00000562576 LAMC3Q9Y6N6 1575 aa14.07□□□□□ -0.16
CNEP1R1-204ENST00000562576 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
CNEP1R1-204ENST00000562576 PDS5BQ9NTI5 1447 aa14.05□□□□□ -0.16
CNEP1R1-204ENST00000562576 MRC2Q9UBG0 1479 aa13.99□□□□□ -0.17
CNEP1R1-204ENST00000562576 WDR62O43379 1518 aa13.96□□□□□ -0.17
CNEP1R1-204ENST00000562576 RIMBP3CA6NJZ7 1639 aa13.96□□□□□ -0.17
CNEP1R1-204ENST00000562576 RIMBP3BA6NNM3 1639 aa13.96□□□□□ -0.17
CNEP1R1-204ENST00000562576 RIMBP3Q9UFD9 1639 aa13.96□□□□□ -0.17
CNEP1R1-204ENST00000562576 CADPSQ9ULU8 1353 aa13.94□□□□□ -0.18
CNEP1R1-204ENST00000562576 KCNA4P22459 653 aa13.9□□□□□ -0.18
CNEP1R1-204ENST00000562576 U3KPZ7 1027 aaPredicted RBP13.9□□□□□ -0.18
CNEP1R1-204ENST00000562576 MROH2BQ7Z745 1585 aa13.89□□□□□ -0.19
CNEP1R1-204ENST00000562576 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
CNEP1R1-204ENST00000562576 PEG3Q9GZU2 1588 aa13.88□□□□□ -0.19
CNEP1R1-204ENST00000562576 CYB5RLQ6IPT4 315 aa13.88□□□□□ -0.19
CNEP1R1-204ENST00000562576 ARHGEF11O15085 1522 aa13.83□□□□□ -0.2
CNEP1R1-204ENST00000562576 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
CNEP1R1-204ENST00000562576 FANCD2Q9BXW9 1451 aa13.79□□□□□ -0.2
CNEP1R1-204ENST00000562576 URB2Q14146 1524 aaKnown RBP13.77□□□□□ -0.21
CNEP1R1-204ENST00000562576 CAPN15O75808 1086 aa13.75□□□□□ -0.21
CNEP1R1-204ENST00000562576 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
CNEP1R1-204ENST00000562576 ARAP1Q96P48 1450 aa13.7□□□□□ -0.22
CNEP1R1-204ENST00000562576 APLP2Q06481 763 aa13.7□□□□□ -0.22
CNEP1R1-204ENST00000562576 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
CNEP1R1-204ENST00000562576 DSG3P32926 999 aa13.69□□□□□ -0.22
CNEP1R1-204ENST00000562576 WIZO95785 1651 aa13.69□□□□□ -0.22
CNEP1R1-204ENST00000562576 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
CNEP1R1-204ENST00000562576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
CNEP1R1-204ENST00000562576 HNRNPUL2Q1KMD3 747 aaKnown RBP13.64□□□□□ -0.23
CNEP1R1-204ENST00000562576 CFTRP13569 1480 aa13.63□□□□□ -0.23
CNEP1R1-204ENST00000562576 FBLN2P98095 1184 aa13.57□□□□□ -0.24
CNEP1R1-204ENST00000562576 ZNF219Q9P2Y4 722 aaPredicted RBP13.55□□□□□ -0.24
CNEP1R1-204ENST00000562576 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.248e-7■■■□□ 16.1
CNEP1R1-204ENST00000562576 IFT140Q96RY7 1462 aa13.54□□□□□ -0.24
CNEP1R1-204ENST00000562576 CHD1O14646 1710 aa13.53□□□□□ -0.24
CNEP1R1-204ENST00000562576 SAMD1Q6SPF0 538 aaPredicted RBP13.51□□□□□ -0.25
CNEP1R1-204ENST00000562576 EIF4G3O43432 1585 aaKnown RBP13.5□□□□□ -0.25
CNEP1R1-204ENST00000562576 ILDR1Q86SU0 546 aaPredicted RBP13.47□□□□□ -0.25
CNEP1R1-204ENST00000562576 TOPBP1Q92547 1522 aa13.47□□□□□ -0.25
CNEP1R1-204ENST00000562576 RSF1Q96T23 1441 aaPredicted RBP13.45□□□□□ -0.26
CNEP1R1-204ENST00000562576 TARBP1Q13395 1621 aaKnown RBP13.39□□□□□ -0.27
CNEP1R1-204ENST00000562576 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
CNEP1R1-204ENST00000562576 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms