RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 HSPA2P54652 639 aa7.32□□□□□ -1.24
CNGA1-209ENST00000544810 MADDQ8WXG6 1647 aa7.32□□□□□ -1.24
CNGA1-209ENST00000544810 SPDYE4A6NLX3 237 aa7.31□□□□□ -1.24
CNGA1-209ENST00000544810 PKD2Q13563 968 aa7.31□□□□□ -1.24
CNGA1-209ENST00000544810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.31□□□□□ -1.24
CNGA1-209ENST00000544810 BCORL1Q5H9F3 1711 aa7.31□□□□□ -1.24
CNGA1-209ENST00000544810 VSIG10Q8N0Z9 540 aa7.3□□□□□ -1.24
CNGA1-209ENST00000544810 KIF27Q86VH2 1401 aa7.3□□□□□ -1.24
CNGA1-209ENST00000544810 CARMIL1Q5VZK9 1371 aa7.28□□□□□ -1.24
CNGA1-209ENST00000544810 UGGT2Q9NYU1 1516 aa7.28□□□□□ -1.24
CNGA1-209ENST00000544810 KCNH8Q96L42 1107 aa7.28□□□□□ -1.24
CNGA1-209ENST00000544810 CFAP44Q96MT7 982 aa7.27□□□□□ -1.25
CNGA1-209ENST00000544810 RIMS1Q86UR5 1692 aaKnown RBP7.27□□□□□ -1.25
CNGA1-209ENST00000544810 KIAA0556O60303 1618 aa7.27□□□□□ -1.25
CNGA1-209ENST00000544810 PHLDB1Q86UU1 1377 aa7.27□□□□□ -1.25
CNGA1-209ENST00000544810 ARID4BQ4LE39 1312 aaPredicted RBP7.27□□□□□ -1.25
CNGA1-209ENST00000544810 U3KPZ7 1027 aaPredicted RBP7.27□□□□□ -1.25
CNGA1-209ENST00000544810 PAXIP1Q6ZW49 1069 aaPredicted RBP7.26□□□□□ -1.25
CNGA1-209ENST00000544810 ZNF219Q9P2Y4 722 aaPredicted RBP7.25□□□□□ -1.25
CNGA1-209ENST00000544810 FRMPD1Q5SYB0 1578 aa7.25□□□□□ -1.25
CNGA1-209ENST00000544810 RAPGEF3O95398 923 aa7.25□□□□□ -1.25
CNGA1-209ENST00000544810 SAMD1Q6SPF0 538 aaPredicted RBP7.25□□□□□ -1.25
CNGA1-209ENST00000544810 ARHGEF40Q8TER5 1519 aa7.24□□□□□ -1.25
CNGA1-209ENST00000544810 ABCA8O94911 1581 aa7.24□□□□□ -1.25
CNGA1-209ENST00000544810 PPARGC1BQ86YN6 1023 aaKnown RBP7.24□□□□□ -1.25
CNGA1-209ENST00000544810 NEO1Q92859 1461 aa7.23□□□□□ -1.25
CNGA1-209ENST00000544810 YEATS2Q9ULM3 1422 aa7.23□□□□□ -1.25
CNGA1-209ENST00000544810 MKRN4PQ13434 485 aaPredicted RBP7.22□□□□□ -1.25
CNGA1-209ENST00000544810 PCGF6Q9BYE7 350 aa7.22□□□□□ -1.25
CNGA1-209ENST00000544810 TIMELESSQ9UNS1 1208 aa7.22□□□□□ -1.25
CNGA1-209ENST00000544810 ZEB1P37275 1124 aaPredicted RBP7.21□□□□□ -1.26
CNGA1-209ENST00000544810 ABCA9Q8IUA7 1624 aa7.21□□□□□ -1.26
CNGA1-209ENST00000544810 POGZQ7Z3K3 1410 aa7.21□□□□□ -1.26
CNGA1-209ENST00000544810 FANCAO15360 1455 aa7.2□□□□□ -1.26
CNGA1-209ENST00000544810 IQSEC2Q5JU85 1478 aa7.2□□□□□ -1.26
CNGA1-209ENST00000544810 TTC37Q6PGP7 1564 aa7.2□□□□□ -1.26
CNGA1-209ENST00000544810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.2□□□□□ -1.26
CNGA1-209ENST00000544810 HNRNPUL2Q1KMD3 747 aaKnown RBP7.2□□□□□ -1.26
CNGA1-209ENST00000544810 TULP1O00294 542 aaPredicted RBP7.19□□□□□ -1.26
CNGA1-209ENST00000544810 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.19□□□□□ -1.26
CNGA1-209ENST00000544810 PTPRTO14522 1441 aa7.18□□□□□ -1.26
CNGA1-209ENST00000544810 AKNAQ7Z591 1439 aa7.18□□□□□ -1.26
CNGA1-209ENST00000544810 LTBP4Q8N2S1 1624 aa7.18□□□□□ -1.26
CNGA1-209ENST00000544810 GOLGA3Q08378 1498 aa7.18□□□□□ -1.26
CNGA1-209ENST00000544810 RAPGEF2Q9Y4G8 1499 aa7.18□□□□□ -1.26
CNGA1-209ENST00000544810 PREX1Q8TCU6 1659 aa7.17□□□□□ -1.26
CNGA1-209ENST00000544810 TSHZ2Q9NRE2 1034 aa7.17□□□□□ -1.26
CNGA1-209ENST00000544810 STRCQ7RTU9 1775 aa7.17□□□□□ -1.26
CNGA1-209ENST00000544810 FHOD3Q2V2M9 1422 aa7.17□□□□□ -1.26
CNGA1-209ENST00000544810 DENND4BO75064 1496 aaPredicted RBP7.17□□□□□ -1.26
CNGA1-209ENST00000544810 ATP10BO94823 1461 aa7.17□□□□□ -1.26
CNGA1-209ENST00000544810 SUPT5HO00267 1087 aaKnown RBP7.16□□□□□ -1.26
CNGA1-209ENST00000544810 SIGLEC1Q9BZZ2 1709 aa7.16□□□□□ -1.26
CNGA1-209ENST00000544810 ZMYM4Q5VZL5 1548 aa7.16□□□□□ -1.26
CNGA1-209ENST00000544810 ZFYVE16Q7Z3T8 1539 aa7.16□□□□□ -1.26
CNGA1-209ENST00000544810 PROM2Q8N271 834 aa7.16□□□□□ -1.26
CNGA1-209ENST00000544810 ARHGEF12Q9NZN5 1544 aa7.15□□□□□ -1.26
CNGA1-209ENST00000544810 ARID3CA6NKF2 412 aa7.15□□□□□ -1.26
CNGA1-209ENST00000544810 RICTORQ6R327 1708 aa7.15□□□□□ -1.27
CNGA1-209ENST00000544810 EFCAB5A4FU69 1503 aa7.15□□□□□ -1.27
CNGA1-209ENST00000544810 UHRF1BP1Q6BDS2 1440 aa7.15□□□□□ -1.27
CNGA1-209ENST00000544810 FER1L4A9Z1Z3 1794 aa7.15□□□□□ -1.27
CNGA1-209ENST00000544810 ECM2O94769 699 aaPredicted RBP7.14□□□□□ -1.27
CNGA1-209ENST00000544810 MLECQ14165 292 aa7.14□□□□□ -1.27
CNGA1-209ENST00000544810 BBXQ8WY36 941 aaPredicted RBP7.14□□□□□ -1.27
CNGA1-209ENST00000544810 MAGI2Q86UL8 1455 aa7.13□□□□□ -1.27
CNGA1-209ENST00000544810 MED1Q15648 1581 aaPredicted RBP7.13□□□□□ -1.27
CNGA1-209ENST00000544810 CEBPAP49715 358 aaPredicted RBP7.13□□□□□ -1.27
CNGA1-209ENST00000544810 KLHL34Q8N239 644 aa7.12□□□□□ -1.27
CNGA1-209ENST00000544810 RGL2O15211 777 aa7.11□□□□□ -1.27
CNGA1-209ENST00000544810 UBAP1LF5GYI3 381 aa7.11□□□□□ -1.27
CNGA1-209ENST00000544810 TRIM26Q12899 539 aaPredicted RBP7.11□□□□□ -1.27
CNGA1-209ENST00000544810 CFAP74Q9C0B2 1584 aa7.1□□□□□ -1.27
CNGA1-209ENST00000544810 CTTNBP2Q8WZ74 1663 aa7.1□□□□□ -1.27
CNGA1-209ENST00000544810 NCOA1Q15788 1441 aa7.1□□□□□ -1.27
CNGA1-209ENST00000544810 HECW1Q76N89 1606 aa7.1□□□□□ -1.27
CNGA1-209ENST00000544810 C9orf84Q5VXU9 1444 aa7.09□□□□□ -1.27
CNGA1-209ENST00000544810 ATP10AO60312 1499 aa7.09□□□□□ -1.27
CNGA1-209ENST00000544810 APLP2Q06481 763 aa7.08□□□□□ -1.28
CNGA1-209ENST00000544810 FAM9AQ8IZU1 332 aaPredicted RBP7.07□□□□□ -1.28
CNGA1-209ENST00000544810 SPRYD3Q8NCJ5 442 aa7.07□□□□□ -1.28
CNGA1-209ENST00000544810 ACIN1Q9UKV3 1341 aaKnown RBP7.07□□□□□ -1.28
CNGA1-209ENST00000544810 HSPA1LP34931 641 aa7.07□□□□□ -1.28
CNGA1-209ENST00000544810 ZNF335Q9H4Z2 1342 aaPredicted RBP7.06□□□□□ -1.28
CNGA1-209ENST00000544810 RAPGEF6Q8TEU7 1601 aa7.06□□□□□ -1.28
CNGA1-209ENST00000544810 NUP153P49790 1475 aaKnown RBP7.06□□□□□ -1.28
CNGA1-209ENST00000544810 SCAPERQ9BY12 1400 aa7.05□□□□□ -1.28
CNGA1-209ENST00000544810 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.05□□□□□ -1.28
CNGA1-209ENST00000544810 P3H3Q8IVL6 736 aa7.05□□□□□ -1.28
CNGA1-209ENST00000544810 TRAPPC8Q9Y2L5 1435 aa7.05□□□□□ -1.28
CNGA1-209ENST00000544810 NBR1Q14596 966 aa7.04□□□□□ -1.28
CNGA1-209ENST00000544810 GTF3C3Q9Y5Q9 886 aa7.04□□□□□ -1.28
CNGA1-209ENST00000544810 CHGAP10645 457 aaKnown RBP7.04□□□□□ -1.28
CNGA1-209ENST00000544810 SPOCK2Q92563 424 aa7.04□□□□□ -1.28
CNGA1-209ENST00000544810 CAMSAP1Q5T5Y3 1602 aa7.03□□□□□ -1.28
CNGA1-209ENST00000544810 C3P01024 1663 aa7.03□□□□□ -1.28
CNGA1-209ENST00000544810 PLEKHD1A6NEE1 506 aa7.02□□□□□ -1.29
CNGA1-209ENST00000544810 NCKAP5LQ9HCH0 1330 aa7.02□□□□□ -1.29
CNGA1-209ENST00000544810 SAMD9Q5K651 1589 aa7.02□□□□□ -1.29
CNGA1-209ENST00000544810 PRXQ9BXM0 1461 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms