RNA–Protein interactions for RNA: ENST00000525896.1

CKAP5-204, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 2

Gene CKAP5, Length 832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-204ENST00000525896 TRIM26Q12899 539 aaPredicted RBP12.25□□□□□ -0.45
CKAP5-204ENST00000525896 CDK11AQ9UQ88 783 aaPredicted RBP12.25□□□□□ -0.45
CKAP5-204ENST00000525896 CASKIN1Q8WXD9 1431 aa12.24□□□□□ -0.45
CKAP5-204ENST00000525896 FYCO1Q9BQS8 1478 aa12.23□□□□□ -0.45
CKAP5-204ENST00000525896 CFAP43Q8NDM7 1665 aa12.22□□□□□ -0.45
CKAP5-204ENST00000525896 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
CKAP5-204ENST00000525896 MAGI3Q5TCQ9 1506 aa12.21□□□□□ -0.46
CKAP5-204ENST00000525896 CD109Q6YHK3 1445 aa12.2□□□□□ -0.46
CKAP5-204ENST00000525896 ARID3CA6NKF2 412 aa12.2□□□□□ -0.46
CKAP5-204ENST00000525896 MYCNP04198 464 aaPredicted RBP12.2□□□□□ -0.46
CKAP5-204ENST00000525896 HECW2Q9P2P5 1572 aa12.2□□□□□ -0.46
CKAP5-204ENST00000525896 MAP3K1Q13233 1512 aa12.2□□□□□ -0.46
CKAP5-204ENST00000525896 KCNH8Q96L42 1107 aa12.19□□□□□ -0.46
CKAP5-204ENST00000525896 POLA2Q14181 598 aa12.18□□□□□ -0.46
CKAP5-204ENST00000525896 CCDC18Q5T9S5 1454 aa12.18□□□□□ -0.46
CKAP5-204ENST00000525896 PPARGC1BQ86YN6 1023 aaKnown RBP12.17□□□□□ -0.46
CKAP5-204ENST00000525896 ATP10BO94823 1461 aa12.16□□□□□ -0.46
CKAP5-204ENST00000525896 MTUS2Q5JR59 1369 aa12.15□□□□□ -0.46
CKAP5-204ENST00000525896 HECW1Q76N89 1606 aa12.15□□□□□ -0.47
CKAP5-204ENST00000525896 ABCA9Q8IUA7 1624 aa12.14□□□□□ -0.47
CKAP5-204ENST00000525896 PCGF6Q9BYE7 350 aa12.13□□□□□ -0.47
CKAP5-204ENST00000525896 RAPGEF6Q8TEU7 1601 aa12.12□□□□□ -0.47
CKAP5-204ENST00000525896 PLEKHD1A6NEE1 506 aa12.12□□□□□ -0.47
CKAP5-204ENST00000525896 PCF11O94913 1555 aaKnown RBP12.12□□□□□ -0.47
CKAP5-204ENST00000525896 ARAP3Q8WWN8 1544 aa12.11□□□□□ -0.47
CKAP5-204ENST00000525896 TIAM1Q13009 1591 aa12.1□□□□□ -0.47
CKAP5-204ENST00000525896 FRMPD1Q5SYB0 1578 aa12.1□□□□□ -0.47
CKAP5-204ENST00000525896 NUP153P49790 1475 aaKnown RBP12.09□□□□□ -0.47
CKAP5-204ENST00000525896 LRRC9Q6ZRR7 1453 aa12.09□□□□□ -0.47
CKAP5-204ENST00000525896 KANK4Q5T7N3 995 aaPredicted RBP12.08□□□□□ -0.48
CKAP5-204ENST00000525896 CHRDL2Q6WN34 429 aa12.07□□□□□ -0.48
CKAP5-204ENST00000525896 ADAMTSL3P82987 1691 aa12.06□□□□□ -0.48
CKAP5-204ENST00000525896 RAPGEF3O95398 923 aa12.06□□□□□ -0.48
CKAP5-204ENST00000525896 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
CKAP5-204ENST00000525896 EHBP1L1Q8N3D4 1523 aa12.04□□□□□ -0.48
CKAP5-204ENST00000525896 NEO1Q92859 1461 aa12.03□□□□□ -0.48
CKAP5-204ENST00000525896 MADDQ8WXG6 1647 aa12.03□□□□□ -0.48
CKAP5-204ENST00000525896 BCORL1Q5H9F3 1711 aa12.03□□□□□ -0.48
CKAP5-204ENST00000525896 PTPRMP28827 1452 aa12.02□□□□□ -0.48
CKAP5-204ENST00000525896 TTC37Q6PGP7 1564 aa12.01□□□□□ -0.49
CKAP5-204ENST00000525896 RICTORQ6R327 1708 aa12.01□□□□□ -0.49
CKAP5-204ENST00000525896 SIGLEC1Q9BZZ2 1709 aa12.01□□□□□ -0.49
CKAP5-204ENST00000525896 ARHGEF40Q8TER5 1519 aa12.01□□□□□ -0.49
CKAP5-204ENST00000525896 TROQ12816 1431 aaPredicted RBP12□□□□□ -0.49
CKAP5-204ENST00000525896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12□□□□□ -0.49
CKAP5-204ENST00000525896 PHLDB1Q86UU1 1377 aa11.99□□□□□ -0.49
CKAP5-204ENST00000525896 CCNB3Q8WWL7 1395 aa11.99□□□□□ -0.49
CKAP5-204ENST00000525896 SUPT6HQ7KZ85 1726 aaKnown RBP11.98□□□□□ -0.49
CKAP5-204ENST00000525896 CDK13Q14004 1512 aaKnown RBP11.98□□□□□ -0.49
CKAP5-204ENST00000525896 FAM50AQ14320 339 aaKnown RBP11.98□□□□□ -0.49
CKAP5-204ENST00000525896 RIMS1Q86UR5 1692 aaKnown RBP11.97□□□□□ -0.49
CKAP5-204ENST00000525896 FANCAO15360 1455 aa11.96□□□□□ -0.49
CKAP5-204ENST00000525896 NCOA2Q15596 1464 aa11.96□□□□□ -0.49
CKAP5-204ENST00000525896 DENND4BO75064 1496 aaPredicted RBP11.95□□□□□ -0.5
CKAP5-204ENST00000525896 AKNAQ7Z591 1439 aa11.95□□□□□ -0.5
CKAP5-204ENST00000525896 RRBP1Q9P2E9 1410 aaKnown RBP11.95□□□□□ -0.5
CKAP5-204ENST00000525896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.95□□□□□ -0.5
CKAP5-204ENST00000525896 ATF5Q9Y2D1 282 aaPredicted RBP11.95□□□□□ -0.5
CKAP5-204ENST00000525896 LMTK3Q96Q04 1460 aa11.95□□□□□ -0.5
CKAP5-204ENST00000525896 MYOM3Q5VTT5 1437 aa11.94□□□□□ -0.5
CKAP5-204ENST00000525896 MIA2Q96PC5 1412 aa11.94□□□□□ -0.5
CKAP5-204ENST00000525896 YEATS2Q9ULM3 1422 aa11.94□□□□□ -0.5
CKAP5-204ENST00000525896 CFAP74Q9C0B2 1584 aa11.94□□□□□ -0.5
CKAP5-204ENST00000525896 CFDP1Q9UEE9 299 aaPredicted RBP11.94□□□□□ -0.5
CKAP5-204ENST00000525896 ZMYM4Q5VZL5 1548 aa11.94□□□□□ -0.5
CKAP5-204ENST00000525896 ARID4BQ4LE39 1312 aaPredicted RBP11.93□□□□□ -0.5
CKAP5-204ENST00000525896 ACIN1Q9UKV3 1341 aaKnown RBP11.92□□□□□ -0.5
CKAP5-204ENST00000525896 ZFYVE16Q7Z3T8 1539 aa11.92□□□□□ -0.5
CKAP5-204ENST00000525896 KIF14Q15058 1648 aa11.92□□□□□ -0.5
CKAP5-204ENST00000525896 FGD6Q6ZV73 1430 aa11.91□□□□□ -0.5
CKAP5-204ENST00000525896 ITGAEP38570 1179 aa11.9□□□□□ -0.5
CKAP5-204ENST00000525896 RSPH4AQ5TD94 716 aa11.9□□□□□ -0.5
CKAP5-204ENST00000525896 LRRIQ1Q96JM4 1722 aa11.89□□□□□ -0.51
CKAP5-204ENST00000525896 AKT1S1Q96B36 256 aa11.89□□□□□ -0.51
CKAP5-204ENST00000525896 ZBTB12Q9Y330 459 aaPredicted RBP11.89□□□□□ -0.51
CKAP5-204ENST00000525896 POGZQ7Z3K3 1410 aa11.88□□□□□ -0.51
CKAP5-204ENST00000525896 ZBTB22O15209 634 aa11.88□□□□□ -0.51
CKAP5-204ENST00000525896 ZNF777Q9ULD5 760 aaPredicted RBP11.88□□□□□ -0.51
CKAP5-204ENST00000525896 PLCH2O75038 1416 aa11.87□□□□□ -0.51
CKAP5-204ENST00000525896 MYO5CQ9NQX4 1742 aa11.87□□□□□ -0.51
CKAP5-204ENST00000525896 HSPA2P54652 639 aa11.87□□□□□ -0.51
CKAP5-204ENST00000525896 EFCAB2Q5VUJ9 269 aa11.87□□□□□ -0.51
CKAP5-204ENST00000525896 FER1L4A9Z1Z3 1794 aa11.87□□□□□ -0.51
CKAP5-204ENST00000525896 SCAPERQ9BY12 1400 aa11.86□□□□□ -0.51
CKAP5-204ENST00000525896 TSPY4P0CV99 314 aa11.86□□□□□ -0.51
CKAP5-204ENST00000525896 TSPY10P0CW01 314 aa11.86□□□□□ -0.51
CKAP5-204ENST00000525896 FBXO41Q8TF61 875 aa11.86□□□□□ -0.51
CKAP5-204ENST00000525896 MLECQ14165 292 aa11.85□□□□□ -0.51
CKAP5-204ENST00000525896 ITSN2Q9NZM3 1697 aa11.84□□□□□ -0.51
CKAP5-204ENST00000525896 MAGI2Q86UL8 1455 aa11.84□□□□□ -0.51
CKAP5-204ENST00000525896 ZEB1P37275 1124 aaPredicted RBP11.84□□□□□ -0.51
CKAP5-204ENST00000525896 ARHGEF12Q9NZN5 1544 aa11.83□□□□□ -0.52
CKAP5-204ENST00000525896 GPATCH8Q9UKJ3 1502 aaKnown RBP11.83□□□□□ -0.52
CKAP5-204ENST00000525896 PLEKHH2Q8IVE3 1493 aa11.83□□□□□ -0.52
CKAP5-204ENST00000525896 TCOF1Q13428 1488 aaKnown RBP11.82□□□□□ -0.52
CKAP5-204ENST00000525896 PTPN23Q9H3S7 1636 aa11.82□□□□□ -0.52
CKAP5-204ENST00000525896 KDM5CP41229 1560 aa11.81□□□□□ -0.52
CKAP5-204ENST00000525896 C9orf84Q5VXU9 1444 aa11.81□□□□□ -0.52
CKAP5-204ENST00000525896 HRCP23327 699 aa11.81□□□□□ -0.52
CKAP5-204ENST00000525896 CCER1Q8TC90 406 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms