RNA–Protein interactions for RNA: ENST00000525896.1

CKAP5-204, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 2

Gene CKAP5, Length 832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-204ENST00000525896 AEBP2Q6ZN18 517 aaPredicted RBP21.49■■□□□ 1.03
CKAP5-204ENST00000525896 CHIC1Q5VXU3 224 aa20.15■□□□□ 0.82
CKAP5-204ENST00000525896 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
CKAP5-204ENST00000525896 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
CKAP5-204ENST00000525896 NISCHQ9Y2I1 1504 aa18.1■□□□□ 0.49
CKAP5-204ENST00000525896 FOXD1Q16676 465 aa17.16■□□□□ 0.34
CKAP5-204ENST00000525896 ABCC9O60706 1549 aa16.41■□□□□ 0.22
CKAP5-204ENST00000525896 CCDC180Q9P1Z9 1646 aa16.28■□□□□ 0.2
CKAP5-204ENST00000525896 POTEDQ86YR6 584 aa16.22■□□□□ 0.19
CKAP5-204ENST00000525896 MSH5O43196 834 aa16.16■□□□□ 0.18
CKAP5-204ENST00000525896 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
CKAP5-204ENST00000525896 PIAS4Q8N2W9 510 aaPredicted RBP15.99■□□□□ 0.15
CKAP5-204ENST00000525896 PPP6R1Q9UPN7 881 aa15.86■□□□□ 0.13
CKAP5-204ENST00000525896 ADRA2BP18089 450 aa15.8■□□□□ 0.12
CKAP5-204ENST00000525896 RB1CC1Q8TDY2 1594 aa15.52■□□□□ 0.07
CKAP5-204ENST00000525896 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
CKAP5-204ENST00000525896 NACADO15069 1562 aa15.38■□□□□ 0.05
CKAP5-204ENST00000525896 UNC13AQ9UPW8 1703 aa15.26■□□□□ 0.03
CKAP5-204ENST00000525896 DCAF8L2P0C7V8 631 aa15.26■□□□□ 0.03
CKAP5-204ENST00000525896 PABPN1Q86U42 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
CKAP5-204ENST00000525896 BICRAQ9NZM4 1560 aa15.15■□□□□ 0.02
CKAP5-204ENST00000525896 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
CKAP5-204ENST00000525896 ZCCHC6Q5VYS8 1495 aaKnown RBP15.04■□□□□ -0
CKAP5-204ENST00000525896 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
CKAP5-204ENST00000525896 SCRIBQ14160 1630 aa14.89□□□□□ -0.03
CKAP5-204ENST00000525896 SHROOM4Q9ULL8 1493 aa14.82□□□□□ -0.04
CKAP5-204ENST00000525896 CC2D2AQ9P2K1 1620 aa14.82□□□□□ -0.04
CKAP5-204ENST00000525896 CECR2Q9BXF3 1484 aa14.76□□□□□ -0.05
CKAP5-204ENST00000525896 EIF4G1Q04637 1599 aaKnown RBP14.76□□□□□ -0.05
CKAP5-204ENST00000525896 MAPK8IP2Q13387 824 aaPredicted RBP14.59□□□□□ -0.07
CKAP5-204ENST00000525896 DMRT2Q9Y5R5 561 aa14.53□□□□□ -0.08
CKAP5-204ENST00000525896 SCAF1Q9H7N4 1312 aaKnown RBP14.44□□□□□ -0.1
CKAP5-204ENST00000525896 DNAJC5Q9H3Z4 198 aa14.21□□□□□ -0.13
CKAP5-204ENST00000525896 NCAPD3P42695 1498 aa14.2□□□□□ -0.14
CKAP5-204ENST00000525896 ATAD2BQ9ULI0 1458 aa14.18□□□□□ -0.14
CKAP5-204ENST00000525896 SMARCA4P51532 1647 aa14.17□□□□□ -0.14
CKAP5-204ENST00000525896 CUX2O14529 1486 aa14.12□□□□□ -0.15
CKAP5-204ENST00000525896 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
CKAP5-204ENST00000525896 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
CKAP5-204ENST00000525896 SMARCA2P51531 1590 aa14.1□□□□□ -0.15
CKAP5-204ENST00000525896 NESP48681 1621 aa14.1□□□□□ -0.15
CKAP5-204ENST00000525896 CACNB1Q02641 598 aaPredicted RBP14.05□□□□□ -0.16
CKAP5-204ENST00000525896 SUPT5HO00267 1087 aaKnown RBP14.04□□□□□ -0.16
CKAP5-204ENST00000525896 BAZ1BQ9UIG0 1483 aaKnown RBP14.03□□□□□ -0.16
CKAP5-204ENST00000525896 BAZ1AQ9NRL2 1556 aaPredicted RBP14.03□□□□□ -0.16
CKAP5-204ENST00000525896 PEG3Q9GZU2 1588 aa14□□□□□ -0.17
CKAP5-204ENST00000525896 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
CKAP5-204ENST00000525896 PPP4R3CPQ6ZMV5 832 aa13.99□□□□□ -0.17
CKAP5-204ENST00000525896 MROH2BQ7Z745 1585 aa13.99□□□□□ -0.17
CKAP5-204ENST00000525896 THOC2Q8NI27 1593 aaKnown RBP13.98□□□□□ -0.17
CKAP5-204ENST00000525896 KIF21AQ7Z4S6 1674 aa13.91□□□□□ -0.18
CKAP5-204ENST00000525896 LAMC3Q9Y6N6 1575 aa13.91□□□□□ -0.18
CKAP5-204ENST00000525896 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
CKAP5-204ENST00000525896 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
CKAP5-204ENST00000525896 WIZO95785 1651 aa13.82□□□□□ -0.2
CKAP5-204ENST00000525896 PDS5BQ9NTI5 1447 aa13.79□□□□□ -0.2
CKAP5-204ENST00000525896 CNKSR2Q8WXI2 1034 aa13.78□□□□□ -0.2
CKAP5-204ENST00000525896 CADPSQ9ULU8 1353 aa13.76□□□□□ -0.21
CKAP5-204ENST00000525896 RNF39Q9H2S5 420 aa13.76□□□□□ -0.21
CKAP5-204ENST00000525896 MRC2Q9UBG0 1479 aa13.74□□□□□ -0.21
CKAP5-204ENST00000525896 WDR62O43379 1518 aa13.73□□□□□ -0.21
CKAP5-204ENST00000525896 RNF216Q9NWF9 866 aaPredicted RBP13.71□□□□□ -0.21
CKAP5-204ENST00000525896 CEP164Q9UPV0 1460 aa13.65□□□□□ -0.22
CKAP5-204ENST00000525896 FANCD2Q9BXW9 1451 aa13.64□□□□□ -0.23
CKAP5-204ENST00000525896 TOP2AP11388 1531 aaKnown RBP13.62□□□□□ -0.23
CKAP5-204ENST00000525896 CFTRP13569 1480 aa13.61□□□□□ -0.23
CKAP5-204ENST00000525896 TRIM41Q8WV44 630 aa13.58□□□□□ -0.24
CKAP5-204ENST00000525896 URB2Q14146 1524 aaKnown RBP13.57□□□□□ -0.24
CKAP5-204ENST00000525896 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
CKAP5-204ENST00000525896 PRDM2Q13029 1718 aa13.49□□□□□ -0.25
CKAP5-204ENST00000525896 CCDC88BA6NC98 1476 aa13.47□□□□□ -0.25
CKAP5-204ENST00000525896 ZNF608Q9ULD9 1512 aaPredicted RBP13.44□□□□□ -0.26
CKAP5-204ENST00000525896 OSCARQ8IYS5 282 aa13.41□□□□□ -0.26
CKAP5-204ENST00000525896 TOPBP1Q92547 1522 aa13.39□□□□□ -0.27
CKAP5-204ENST00000525896 NCBP3Q53F19 620 aaKnown RBP13.38□□□□□ -0.27
CKAP5-204ENST00000525896 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
CKAP5-204ENST00000525896 RIMBP3CA6NJZ7 1639 aa13.36□□□□□ -0.27
CKAP5-204ENST00000525896 RIMBP3BA6NNM3 1639 aa13.36□□□□□ -0.27
CKAP5-204ENST00000525896 RIMBP3Q9UFD9 1639 aa13.36□□□□□ -0.27
CKAP5-204ENST00000525896 EIF4G3O43432 1585 aaKnown RBP13.35□□□□□ -0.27
CKAP5-204ENST00000525896 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
CKAP5-204ENST00000525896 ARHGEF11O15085 1522 aa13.29□□□□□ -0.28
CKAP5-204ENST00000525896 TARBP1Q13395 1621 aaKnown RBP13.29□□□□□ -0.28
CKAP5-204ENST00000525896 CHD1O14646 1710 aa13.27□□□□□ -0.28
CKAP5-204ENST00000525896 AQRO60306 1485 aaKnown RBP eCLIP13.26□□□□□ -0.299e-6■□□□□ 10.2
CKAP5-204ENST00000525896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.26□□□□□ -0.29
CKAP5-204ENST00000525896 ABCC8Q09428 1581 aa13.25□□□□□ -0.29
CKAP5-204ENST00000525896 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
CKAP5-204ENST00000525896 RAD54L2Q9Y4B4 1467 aa13.22□□□□□ -0.29
CKAP5-204ENST00000525896 NPM3O75607 178 aaKnown RBP13.19□□□□□ -0.3
CKAP5-204ENST00000525896 ARAP1Q96P48 1450 aa13.17□□□□□ -0.3
CKAP5-204ENST00000525896 TDRD9Q8NDG6 1382 aaKnown RBP13.16□□□□□ -0.3
CKAP5-204ENST00000525896 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
CKAP5-204ENST00000525896 WRNQ14191 1432 aaPredicted RBP eCLIP13.15□□□□□ -0.3
CKAP5-204ENST00000525896 CYB5RLQ6IPT4 315 aa13.15□□□□□ -0.3
CKAP5-204ENST00000525896 SOGA1O94964 1423 aa13.14□□□□□ -0.31
CKAP5-204ENST00000525896 CUX1P39880 1505 aa13.14□□□□□ -0.31
CKAP5-204ENST00000525896 FBLN2P98095 1184 aa13.14□□□□□ -0.31
CKAP5-204ENST00000525896 SNAPC4Q5SXM2 1469 aa13.14□□□□□ -0.31
CKAP5-204ENST00000525896 CLASP1Q7Z460 1538 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms