RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 VSIG10Q8N0Z9 540 aa15.86■□□□□ 0.13
TRIO-220ENST00000512979 EPRSP07814 1512 aaKnown RBP15.85■□□□□ 0.13
TRIO-220ENST00000512979 ZCCHC11Q5TAX3 1644 aaKnown RBP15.85■□□□□ 0.13
TRIO-220ENST00000512979 BBXQ8WY36 941 aaPredicted RBP15.84■□□□□ 0.13
TRIO-220ENST00000512979 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.83■□□□□ 0.12
TRIO-220ENST00000512979 BCANQ96GW7 911 aa15.82■□□□□ 0.12
TRIO-220ENST00000512979 ABCA8O94911 1581 aa15.81■□□□□ 0.12
TRIO-220ENST00000512979 PPRC1Q5VV67 1664 aaKnown RBP15.8■□□□□ 0.12
TRIO-220ENST00000512979 WDR7Q9Y4E6 1490 aa15.8■□□□□ 0.12
TRIO-220ENST00000512979 P3H3Q8IVL6 736 aa15.8■□□□□ 0.12
TRIO-220ENST00000512979 MIER1Q8N108 512 aa15.8■□□□□ 0.12
TRIO-220ENST00000512979 EEA1Q15075 1411 aa15.79■□□□□ 0.12
TRIO-220ENST00000512979 FAM9AQ8IZU1 332 aaPredicted RBP15.78■□□□□ 0.12
TRIO-220ENST00000512979 MAP3K4Q9Y6R4 1608 aa15.77■□□□□ 0.12
TRIO-220ENST00000512979 RGL2O15211 777 aa15.76■□□□□ 0.11
TRIO-220ENST00000512979 TEX14Q8IWB6 1497 aa15.76■□□□□ 0.11
TRIO-220ENST00000512979 PAXIP1Q6ZW49 1069 aaPredicted RBP15.75■□□□□ 0.11
TRIO-220ENST00000512979 KCNH8Q96L42 1107 aa15.75■□□□□ 0.11
TRIO-220ENST00000512979 ARID3CA6NKF2 412 aa15.74■□□□□ 0.11
TRIO-220ENST00000512979 COL17A1Q9UMD9 1497 aaPredicted RBP15.73■□□□□ 0.11
TRIO-220ENST00000512979 KDM4FA0A1W2PPD8 638 aa15.72■□□□□ 0.11
TRIO-220ENST00000512979 RANGAP1P46060 587 aaPredicted RBP15.72■□□□□ 0.11
TRIO-220ENST00000512979 CFAP44Q96MT7 982 aa15.72■□□□□ 0.11
TRIO-220ENST00000512979 SAMD9Q5K651 1589 aa15.71■□□□□ 0.11
TRIO-220ENST00000512979 CD109Q6YHK3 1445 aa15.71■□□□□ 0.11
TRIO-220ENST00000512979 ATP10BO94823 1461 aa15.69■□□□□ 0.1
TRIO-220ENST00000512979 KDM2AQ9Y2K7 1162 aa15.68■□□□□ 0.1
TRIO-220ENST00000512979 MAGI3Q5TCQ9 1506 aa15.68■□□□□ 0.1
TRIO-220ENST00000512979 POTEDQ86YR6 584 aa15.67■□□□□ 0.1
TRIO-220ENST00000512979 CFAP43Q8NDM7 1665 aa15.67■□□□□ 0.1
TRIO-220ENST00000512979 FHOD3Q2V2M9 1422 aa15.66■□□□□ 0.1
TRIO-220ENST00000512979 RAPGEF6Q8TEU7 1601 aa15.65■□□□□ 0.1
TRIO-220ENST00000512979 PRKCSHP14314 528 aaPredicted RBP15.64■□□□□ 0.09
TRIO-220ENST00000512979 KIF21BO75037 1637 aa15.64■□□□□ 0.09
TRIO-220ENST00000512979 CIZ1Q9ULV3 898 aaPredicted RBP15.63■□□□□ 0.09
TRIO-220ENST00000512979 ADGRL1O94910 1474 aa15.61■□□□□ 0.09
TRIO-220ENST00000512979 TAOK2Q9UL54 1235 aa15.61■□□□□ 0.09
TRIO-220ENST00000512979 NUP153P49790 1475 aaKnown RBP15.6■□□□□ 0.09
TRIO-220ENST00000512979 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
TRIO-220ENST00000512979 SPRYD3Q8NCJ5 442 aa15.59■□□□□ 0.09
TRIO-220ENST00000512979 ZBTB47Q9UFB7 747 aaPredicted RBP15.59■□□□□ 0.09
TRIO-220ENST00000512979 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.09
TRIO-220ENST00000512979 UBTFP17480 764 aaKnown RBP15.57■□□□□ 0.08
TRIO-220ENST00000512979 ABCA9Q8IUA7 1624 aa15.57■□□□□ 0.08
TRIO-220ENST00000512979 CHGAP10645 457 aaKnown RBP15.55■□□□□ 0.08
TRIO-220ENST00000512979 ARAP3Q8WWN8 1544 aa15.54■□□□□ 0.08
TRIO-220ENST00000512979 PLEKHD1A6NEE1 506 aa15.54■□□□□ 0.08
TRIO-220ENST00000512979 PHLDB1Q86UU1 1377 aa15.53■□□□□ 0.08
TRIO-220ENST00000512979 TSHZ2Q9NRE2 1034 aa15.51■□□□□ 0.07
TRIO-220ENST00000512979 NEO1Q92859 1461 aa15.51■□□□□ 0.07
TRIO-220ENST00000512979 RAPGEF3O95398 923 aa15.5■□□□□ 0.07
TRIO-220ENST00000512979 ARHGAP35Q9NRY4 1499 aa15.47■□□□□ 0.07
TRIO-220ENST00000512979 CDK13Q14004 1512 aaKnown RBP15.47■□□□□ 0.07
TRIO-220ENST00000512979 FMN1Q68DA7 1419 aa15.46■□□□□ 0.07
TRIO-220ENST00000512979 ATP1B4Q9UN42 357 aaPredicted RBP15.46■□□□□ 0.07
TRIO-220ENST00000512979 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.44■□□□□ 0.06
TRIO-220ENST00000512979 AKNAQ7Z591 1439 aa15.43■□□□□ 0.06
TRIO-220ENST00000512979 FANCAO15360 1455 aa15.42■□□□□ 0.06
TRIO-220ENST00000512979 FRMPD1Q5SYB0 1578 aa15.41■□□□□ 0.06
TRIO-220ENST00000512979 TTC37Q6PGP7 1564 aa15.41■□□□□ 0.06
TRIO-220ENST00000512979 DENND4BO75064 1496 aaPredicted RBP15.41■□□□□ 0.06
TRIO-220ENST00000512979 TPRNQ4KMQ1 711 aa15.41■□□□□ 0.06
TRIO-220ENST00000512979 HECW1Q76N89 1606 aa15.41■□□□□ 0.06
TRIO-220ENST00000512979 CDK11AQ9UQ88 783 aaPredicted RBP15.39■□□□□ 0.05
TRIO-220ENST00000512979 CFAP74Q9C0B2 1584 aa15.39■□□□□ 0.05
TRIO-220ENST00000512979 ARID4BQ4LE39 1312 aaPredicted RBP15.38■□□□□ 0.05
TRIO-220ENST00000512979 HS6ST3Q8IZP7 471 aa15.37■□□□□ 0.05
TRIO-220ENST00000512979 HECW2Q9P2P5 1572 aa15.36■□□□□ 0.05
TRIO-220ENST00000512979 PLCH2O75038 1416 aa15.35■□□□□ 0.05
TRIO-220ENST00000512979 RICTORQ6R327 1708 aa15.34■□□□□ 0.05
TRIO-220ENST00000512979 ARHGEF40Q8TER5 1519 aa15.34■□□□□ 0.05
TRIO-220ENST00000512979 GSE1Q14687 1217 aa15.34■□□□□ 0.05
TRIO-220ENST00000512979 TROQ12816 1431 aaPredicted RBP15.34■□□□□ 0.05
TRIO-220ENST00000512979 RNF25Q96BH1 459 aaPredicted RBP15.33■□□□□ 0.04
TRIO-220ENST00000512979 ADAMTSL3P82987 1691 aa15.32■□□□□ 0.04
TRIO-220ENST00000512979 CLIP1P30622 1438 aa15.32■□□□□ 0.04
TRIO-220ENST00000512979 SCAPERQ9BY12 1400 aa15.32■□□□□ 0.04
TRIO-220ENST00000512979 EFCAB2Q5VUJ9 269 aa15.31■□□□□ 0.04
TRIO-220ENST00000512979 PTPRMP28827 1452 aa15.31■□□□□ 0.04
TRIO-220ENST00000512979 ZMYM4Q5VZL5 1548 aa15.31■□□□□ 0.04
TRIO-220ENST00000512979 KIF14Q15058 1648 aa15.31■□□□□ 0.04
TRIO-220ENST00000512979 BCORL1Q5H9F3 1711 aa15.3■□□□□ 0.04
TRIO-220ENST00000512979 POGZQ7Z3K3 1410 aa15.3■□□□□ 0.04
TRIO-220ENST00000512979 ZFYVE16Q7Z3T8 1539 aa15.3■□□□□ 0.04
TRIO-220ENST00000512979 CASKIN1Q8WXD9 1431 aa15.3■□□□□ 0.04
TRIO-220ENST00000512979 YEATS2Q9ULM3 1422 aa15.3■□□□□ 0.04
TRIO-220ENST00000512979 NUBP1P53384 320 aa15.29■□□□□ 0.04
TRIO-220ENST00000512979 PCF11O94913 1555 aaKnown RBP15.28■□□□□ 0.04
TRIO-220ENST00000512979 MAGI2Q86UL8 1455 aa15.28■□□□□ 0.04
TRIO-220ENST00000512979 LRRIQ1Q96JM4 1722 aa15.28■□□□□ 0.04
TRIO-220ENST00000512979 MYO5CQ9NQX4 1742 aa15.28■□□□□ 0.04
TRIO-220ENST00000512979 CCDC18Q5T9S5 1454 aa15.27■□□□□ 0.04
TRIO-220ENST00000512979 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
TRIO-220ENST00000512979 MADDQ8WXG6 1647 aa15.27■□□□□ 0.03
TRIO-220ENST00000512979 ARHGAP5Q13017 1502 aa15.27■□□□□ 0.03
TRIO-220ENST00000512979 DCAF8Q5TAQ9 597 aa15.24■□□□□ 0.03
TRIO-220ENST00000512979 FYCO1Q9BQS8 1478 aa15.23■□□□□ 0.03
TRIO-220ENST00000512979 MLECQ14165 292 aa15.23■□□□□ 0.03
TRIO-220ENST00000512979 AFAP1Q8N556 730 aa15.22■□□□□ 0.03
TRIO-220ENST00000512979 RIMS1Q86UR5 1692 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms