RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 NECTIN2Q92692 538 aa7.98□□□□□ -1.13
SOX2-OT-218ENST00000498731 ARHGAP35Q9NRY4 1499 aa7.97□□□□□ -1.13
SOX2-OT-218ENST00000498731 PDE4CQ08493 712 aa7.97□□□□□ -1.13
SOX2-OT-218ENST00000498731 DDX10Q13206 875 aaKnown RBP7.97□□□□□ -1.13
SOX2-OT-218ENST00000498731 LAS1LQ9Y4W2 734 aaKnown RBP7.97□□□□□ -1.13
SOX2-OT-218ENST00000498731 EIF4G3O43432 1585 aaKnown RBP7.97□□□□□ -1.13
SOX2-OT-218ENST00000498731 CHIC2Q9UKJ5 165 aa7.96□□□□□ -1.14
SOX2-OT-218ENST00000498731 CNKSR2Q8WXI2 1034 aa7.96□□□□□ -1.14
SOX2-OT-218ENST00000498731 ZNF428Q96B54 188 aa7.96□□□□□ -1.14
SOX2-OT-218ENST00000498731 MTUS2Q5JR59 1369 aa7.95□□□□□ -1.14
SOX2-OT-218ENST00000498731 NPM1P06748 294 aaKnown RBP eCLIP7.95□□□□□ -1.14
SOX2-OT-218ENST00000498731 ERICH3Q5RHP9 1530 aa7.95□□□□□ -1.14
SOX2-OT-218ENST00000498731 JPH4Q96JJ6 628 aa7.95□□□□□ -1.14
SOX2-OT-218ENST00000498731 SIN3AQ96ST3 1273 aa7.94□□□□□ -1.14
SOX2-OT-218ENST00000498731 ARID3AQ99856 593 aa7.94□□□□□ -1.14
SOX2-OT-218ENST00000498731 GRIN2BQ13224 1484 aa7.94□□□□□ -1.14
SOX2-OT-218ENST00000498731 ZNF777Q9ULD5 760 aaPredicted RBP7.94□□□□□ -1.14
SOX2-OT-218ENST00000498731 WASHC2AQ641Q2 1341 aa7.93□□□□□ -1.14
SOX2-OT-218ENST00000498731 ABCA10Q8WWZ4 1543 aa7.93□□□□□ -1.14
SOX2-OT-218ENST00000498731 RTL5Q5HYW3 569 aaPredicted RBP7.92□□□□□ -1.14
SOX2-OT-218ENST00000498731 BCL11BQ9C0K0 894 aaPredicted RBP7.92□□□□□ -1.14
SOX2-OT-218ENST00000498731 C1orf115Q9H7X2 142 aa7.91□□□□□ -1.14
SOX2-OT-218ENST00000498731 CCNB3Q8WWL7 1395 aa7.91□□□□□ -1.14
SOX2-OT-218ENST00000498731 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.91□□□□□ -1.14
SOX2-OT-218ENST00000498731 FHAD1B1AJZ9 1412 aa7.9□□□□□ -1.14
SOX2-OT-218ENST00000498731 ARHGEF11O15085 1522 aa7.9□□□□□ -1.14
SOX2-OT-218ENST00000498731 RRP7BPQ9NSQ0 103 aa7.9□□□□□ -1.15
SOX2-OT-218ENST00000498731 TARBP1Q13395 1621 aaKnown RBP7.89□□□□□ -1.15
SOX2-OT-218ENST00000498731 NEFMP07197 916 aa7.89□□□□□ -1.15
SOX2-OT-218ENST00000498731 PRDM2Q13029 1718 aa7.89□□□□□ -1.15
SOX2-OT-218ENST00000498731 WASHC2CQ9Y4E1 1318 aa7.89□□□□□ -1.15
SOX2-OT-218ENST00000498731 PAXIP1Q6ZW49 1069 aaPredicted RBP7.89□□□□□ -1.15
SOX2-OT-218ENST00000498731 DCAF11Q8TEB1 546 aa7.89□□□□□ -1.15
SOX2-OT-218ENST00000498731 RBM10P98175 930 aaKnown RBP7.88□□□□□ -1.15
SOX2-OT-218ENST00000498731 DHX57Q6P158 1386 aaKnown RBP7.88□□□□□ -1.15
SOX2-OT-218ENST00000498731 CDK11BP21127 795 aaKnown RBP7.88□□□□□ -1.15
SOX2-OT-218ENST00000498731 SYNJ2O15056 1496 aa7.87□□□□□ -1.15
SOX2-OT-218ENST00000498731 CHD1O14646 1710 aa7.87□□□□□ -1.15
SOX2-OT-218ENST00000498731 IPO9Q96P70 1041 aaKnown RBP7.87□□□□□ -1.15
SOX2-OT-218ENST00000498731 PHLDB1Q86UU1 1377 aa7.86□□□□□ -1.15
SOX2-OT-218ENST00000498731 FAM69CQ0P6D2 419 aa7.86□□□□□ -1.15
SOX2-OT-218ENST00000498731 SENP3-EIF4A1A0A087X0R7 540 aa7.85□□□□□ -1.15
SOX2-OT-218ENST00000498731 PRG4Q92954 1404 aaPredicted RBP7.85□□□□□ -1.15
SOX2-OT-218ENST00000498731 MAGI1Q96QZ7 1491 aaPredicted RBP7.85□□□□□ -1.15
SOX2-OT-218ENST00000498731 FMN1Q68DA7 1419 aa7.85□□□□□ -1.15
SOX2-OT-218ENST00000498731 RIMBP3CA6NJZ7 1639 aa7.85□□□□□ -1.15
SOX2-OT-218ENST00000498731 RIMBP3BA6NNM3 1639 aa7.85□□□□□ -1.15
SOX2-OT-218ENST00000498731 RIMBP3Q9UFD9 1639 aa7.85□□□□□ -1.15
SOX2-OT-218ENST00000498731 BRD2P25440 801 aaKnown RBP7.85□□□□□ -1.15
SOX2-OT-218ENST00000498731 AAMPQ13685 434 aa7.84□□□□□ -1.15
SOX2-OT-218ENST00000498731 ZBTB47Q9UFB7 747 aaPredicted RBP7.84□□□□□ -1.15
SOX2-OT-218ENST00000498731 FRAT1Q92837 279 aaPredicted RBP7.84□□□□□ -1.15
SOX2-OT-218ENST00000498731 GRIN2AQ12879 1464 aa7.83□□□□□ -1.16
SOX2-OT-218ENST00000498731 HNRNPUQ00839 825 aaKnown RBP eCLIP7.83□□□□□ -1.16
SOX2-OT-218ENST00000498731 PPP1R15AO75807 674 aaPredicted RBP7.82□□□□□ -1.16
SOX2-OT-218ENST00000498731 RRAGDQ9NQL2 400 aaPredicted RBP7.82□□□□□ -1.16
SOX2-OT-218ENST00000498731 RAB3GAP2Q9H2M9 1393 aa7.82□□□□□ -1.16
SOX2-OT-218ENST00000498731 LRRC9Q6ZRR7 1453 aa7.82□□□□□ -1.16
SOX2-OT-218ENST00000498731 FGD1P98174 961 aa7.82□□□□□ -1.16
SOX2-OT-218ENST00000498731 ARID4BQ4LE39 1312 aaPredicted RBP7.82□□□□□ -1.16
SOX2-OT-218ENST00000498731 CCDC184Q52MB2 194 aa7.81□□□□□ -1.16
SOX2-OT-218ENST00000498731 PPP4R2Q9NY27 417 aa7.81□□□□□ -1.16
SOX2-OT-218ENST00000498731 PCF11O94913 1555 aaKnown RBP7.81□□□□□ -1.16
SOX2-OT-218ENST00000498731 PKD2Q13563 968 aa7.81□□□□□ -1.16
SOX2-OT-218ENST00000498731 SLC4A3P48751 1232 aa7.8□□□□□ -1.16
SOX2-OT-218ENST00000498731 CNGB1Q14028 1251 aaPredicted RBP7.8□□□□□ -1.16
SOX2-OT-218ENST00000498731 SKAP1Q86WV1 359 aa7.8□□□□□ -1.16
SOX2-OT-218ENST00000498731 ERCC6L2Q5T890 1561 aa7.8□□□□□ -1.16
SOX2-OT-218ENST00000498731 PLEKHD1A6NEE1 506 aa7.8□□□□□ -1.16
SOX2-OT-218ENST00000498731 ZNF644Q9H582 1327 aaPredicted RBP7.79□□□□□ -1.16
SOX2-OT-218ENST00000498731 CUL7Q14999 1698 aa7.79□□□□□ -1.16
SOX2-OT-218ENST00000498731 TIAM1Q13009 1591 aa7.79□□□□□ -1.16
SOX2-OT-218ENST00000498731 CASKIN1Q8WXD9 1431 aa7.79□□□□□ -1.16
SOX2-OT-218ENST00000498731 RSPH6AQ9H0K4 717 aa7.79□□□□□ -1.16
SOX2-OT-218ENST00000498731 CFDP1Q9UEE9 299 aaPredicted RBP7.79□□□□□ -1.16
SOX2-OT-218ENST00000498731 PTPRGP23470 1445 aa7.78□□□□□ -1.16
SOX2-OT-218ENST00000498731 GSE1Q14687 1217 aa7.78□□□□□ -1.16
SOX2-OT-218ENST00000498731 SETD5Q9C0A6 1442 aa7.78□□□□□ -1.16
SOX2-OT-218ENST00000498731 ZNF326Q5BKZ1 582 aaKnown RBP7.77□□□□□ -1.16
SOX2-OT-218ENST00000498731 PBRM1Q86U86 1689 aa7.77□□□□□ -1.17
SOX2-OT-218ENST00000498731 ANP32AP39687 249 aaKnown RBP7.77□□□□□ -1.17
SOX2-OT-218ENST00000498731 TAF7LQ5H9L4 462 aa7.77□□□□□ -1.17
SOX2-OT-218ENST00000498731 POLR3GLQ9BT43 218 aa7.77□□□□□ -1.17
SOX2-OT-218ENST00000498731 RRBP1Q9P2E9 1410 aaKnown RBP7.76□□□□□ -1.17
SOX2-OT-218ENST00000498731 ABCA5Q8WWZ7 1642 aa7.76□□□□□ -1.17
SOX2-OT-218ENST00000498731 CDK13Q14004 1512 aaKnown RBP7.76□□□□□ -1.17
SOX2-OT-218ENST00000498731 WDR97A6NE52 1622 aa7.76□□□□□ -1.17
SOX2-OT-218ENST00000498731 RGS3P49796 1198 aa7.76□□□□□ -1.17
SOX2-OT-218ENST00000498731 BRPF1P55201 1214 aaPredicted RBP7.75□□□□□ -1.17
SOX2-OT-218ENST00000498731 FYCO1Q9BQS8 1478 aa7.75□□□□□ -1.17
SOX2-OT-218ENST00000498731 EFCAB5A4FU69 1503 aa7.75□□□□□ -1.17
SOX2-OT-218ENST00000498731 CEP170Q5SW79 1584 aa7.75□□□□□ -1.17
SOX2-OT-218ENST00000498731 CARMIL2Q6F5E8 1435 aa7.75□□□□□ -1.17
SOX2-OT-218ENST00000498731 IQGAP2Q13576 1575 aa7.74□□□□□ -1.17
SOX2-OT-218ENST00000498731 NCOA2Q15596 1464 aa7.74□□□□□ -1.17
SOX2-OT-218ENST00000498731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.74□□□□□ -1.17
SOX2-OT-218ENST00000498731 FGD6Q6ZV73 1430 aa7.74□□□□□ -1.17
SOX2-OT-218ENST00000498731 ADAMTS12P58397 1594 aa7.73□□□□□ -1.17
SOX2-OT-218ENST00000498731 CTTNBP2Q8WZ74 1663 aa7.73□□□□□ -1.17
SOX2-OT-218ENST00000498731 TONSLQ96HA7 1378 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms