RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 AEBP2Q6ZN18 517 aaPredicted RBP11.25□□□□□ -0.61
SOX2-OT-218ENST00000498731 NISCHQ9Y2I1 1504 aa11.24□□□□□ -0.61
SOX2-OT-218ENST00000498731 SLC24A1O60721 1099 aa10.8□□□□□ -0.68
SOX2-OT-218ENST00000498731 CHIC1Q5VXU3 224 aa10.7□□□□□ -0.7
SOX2-OT-218ENST00000498731 EHMT2Q96KQ7 1210 aa10.15□□□□□ -0.78
SOX2-OT-218ENST00000498731 PLPPR3Q6T4P5 718 aa10.1□□□□□ -0.79
SOX2-OT-218ENST00000498731 DCAF8L2P0C7V8 631 aa10.05□□□□□ -0.8
SOX2-OT-218ENST00000498731 ABCC9O60706 1549 aa9.99□□□□□ -0.81
SOX2-OT-218ENST00000498731 PPARGC1BQ86YN6 1023 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-218ENST00000498731 SHROOM4Q9ULL8 1493 aa9.89□□□□□ -0.83
SOX2-OT-218ENST00000498731 HRCP23327 699 aa9.88□□□□□ -0.83
SOX2-OT-218ENST00000498731 RTN4Q9NQC3 1192 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-218ENST00000498731 PELP1Q8IZL8 1130 aaKnown RBP9.83□□□□□ -0.84
SOX2-OT-218ENST00000498731 SCAF1Q9H7N4 1312 aaKnown RBP9.76□□□□□ -0.85
SOX2-OT-218ENST00000498731 PHF23Q9BUL5 403 aaPredicted RBP9.69□□□□□ -0.86
SOX2-OT-218ENST00000498731 DAXXQ9UER7 740 aaPredicted RBP9.68□□□□□ -0.86
SOX2-OT-218ENST00000498731 SUPT5HO00267 1087 aaKnown RBP9.65□□□□□ -0.86
SOX2-OT-218ENST00000498731 PRKCSHP14314 528 aaPredicted RBP9.62□□□□□ -0.87
SOX2-OT-218ENST00000498731 PCGF6Q9BYE7 350 aa9.6□□□□□ -0.87
SOX2-OT-218ENST00000498731 CCDC180Q9P1Z9 1646 aa9.55□□□□□ -0.88
SOX2-OT-218ENST00000498731 PABPN1Q86U42 306 aaKnown RBP eCLIP9.53□□□□□ -0.88
SOX2-OT-218ENST00000498731 NCBP3Q53F19 620 aaKnown RBP9.52□□□□□ -0.89
SOX2-OT-218ENST00000498731 KCNA4P22459 653 aa9.48□□□□□ -0.89
SOX2-OT-218ENST00000498731 SENP3Q9H4L4 574 aaPredicted RBP9.48□□□□□ -0.89
SOX2-OT-218ENST00000498731 MYT1Q01538 1121 aa9.42□□□□□ -0.9
SOX2-OT-218ENST00000498731 MYO15BQ96JP2 1530 aa9.42□□□□□ -0.9
SOX2-OT-218ENST00000498731 ZCCHC6Q5VYS8 1495 aaKnown RBP9.4□□□□□ -0.9
SOX2-OT-218ENST00000498731 CSRNP3Q8WYN3 585 aa9.37□□□□□ -0.91
SOX2-OT-218ENST00000498731 APLP2Q06481 763 aa9.35□□□□□ -0.91
SOX2-OT-218ENST00000498731 TIMELESSQ9UNS1 1208 aa9.34□□□□□ -0.91
SOX2-OT-218ENST00000498731 FAM9AQ8IZU1 332 aaPredicted RBP9.32□□□□□ -0.92
SOX2-OT-218ENST00000498731 NEUROD1Q13562 356 aa9.31□□□□□ -0.92
SOX2-OT-218ENST00000498731 BCL11AQ9H165 835 aa9.28□□□□□ -0.92
SOX2-OT-218ENST00000498731 DNAJC5BQ9UF47 199 aa9.28□□□□□ -0.92
SOX2-OT-218ENST00000498731 GTF3C3Q9Y5Q9 886 aa9.25□□□□□ -0.93
SOX2-OT-218ENST00000498731 RB1CC1Q8TDY2 1594 aa9.24□□□□□ -0.93
SOX2-OT-218ENST00000498731 AMER1Q5JTC6 1135 aaPredicted RBP9.2□□□□□ -0.94
SOX2-OT-218ENST00000498731 ACIN1Q9UKV3 1341 aaKnown RBP9.2□□□□□ -0.94
SOX2-OT-218ENST00000498731 SCRIBQ14160 1630 aa9.14□□□□□ -0.95
SOX2-OT-218ENST00000498731 NACADO15069 1562 aa9.14□□□□□ -0.95
SOX2-OT-218ENST00000498731 TULP1O00294 542 aaPredicted RBP9.11□□□□□ -0.95
SOX2-OT-218ENST00000498731 KLHL34Q8N239 644 aa9.09□□□□□ -0.95
SOX2-OT-218ENST00000498731 LOC105371045A0A1W2PR82 267 aa9.04□□□□□ -0.96
SOX2-OT-218ENST00000498731 DCAF1Q9Y4B6 1507 aa9.03□□□□□ -0.96
SOX2-OT-218ENST00000498731 ARXQ96QS3 562 aa9.02□□□□□ -0.97
SOX2-OT-218ENST00000498731 TAOK2Q9UL54 1235 aa9.01□□□□□ -0.97
SOX2-OT-218ENST00000498731 ERICH6Q7L0X2 663 aa8.97□□□□□ -0.97
SOX2-OT-218ENST00000498731 ADRA2BP18089 450 aa8.95□□□□□ -0.98
SOX2-OT-218ENST00000498731 CENPBP07199 599 aaPredicted RBP8.94□□□□□ -0.98
SOX2-OT-218ENST00000498731 TTBK1Q5TCY1 1321 aaPredicted RBP8.94□□□□□ -0.98
SOX2-OT-218ENST00000498731 TRIM26Q12899 539 aaPredicted RBP8.94□□□□□ -0.98
SOX2-OT-218ENST00000498731 UNC13AQ9UPW8 1703 aa8.92□□□□□ -0.98
SOX2-OT-218ENST00000498731 YTHDC1Q96MU7 727 aaKnown RBP8.91□□□□□ -0.98
SOX2-OT-218ENST00000498731 TRIM41Q8WV44 630 aa8.91□□□□□ -0.98
SOX2-OT-218ENST00000498731 BICRAQ9NZM4 1560 aa8.91□□□□□ -0.98
SOX2-OT-218ENST00000498731 CECR2Q9BXF3 1484 aa8.9□□□□□ -0.98
SOX2-OT-218ENST00000498731 TPRNQ4KMQ1 711 aa8.9□□□□□ -0.98
SOX2-OT-218ENST00000498731 PLEKHG5O94827 1062 aa8.88□□□□□ -0.99
SOX2-OT-218ENST00000498731 SLC4A1APQ9BWU0 796 aaKnown RBP8.88□□□□□ -0.99
SOX2-OT-218ENST00000498731 RSF1Q96T23 1441 aaPredicted RBP8.88□□□□□ -0.99
SOX2-OT-218ENST00000498731 ANP32EQ9BTT0 268 aa8.88□□□□□ -0.99
SOX2-OT-218ENST00000498731 FOXD1Q16676 465 aa8.86□□□□□ -0.99
SOX2-OT-218ENST00000498731 ZEB1P37275 1124 aaPredicted RBP8.86□□□□□ -0.99
SOX2-OT-218ENST00000498731 DIEXFQ68CQ4 756 aaKnown RBP8.82□□□□□ -1
SOX2-OT-218ENST00000498731 PODXL2Q9NZ53 605 aa8.82□□□□□ -1
SOX2-OT-218ENST00000498731 CC2D2AQ9P2K1 1620 aa8.8□□□□□ -1
SOX2-OT-218ENST00000498731 EIF5BO60841 1220 aaKnown RBP8.79□□□□□ -1
SOX2-OT-218ENST00000498731 ANO8Q9HCE9 1232 aaPredicted RBP8.79□□□□□ -1
SOX2-OT-218ENST00000498731 MROH2BQ7Z745 1585 aa8.79□□□□□ -1
SOX2-OT-218ENST00000498731 EIF4G1Q04637 1599 aaKnown RBP8.78□□□□□ -1
SOX2-OT-218ENST00000498731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.77□□□□□ -1.01
SOX2-OT-218ENST00000498731 TSHZ2Q9NRE2 1034 aa8.77□□□□□ -1.01
SOX2-OT-218ENST00000498731 HOMEZQ8IX15 550 aa8.74□□□□□ -1.01
SOX2-OT-218ENST00000498731 WIZO95785 1651 aa8.71□□□□□ -1.01
SOX2-OT-218ENST00000498731 RANGAP1P46060 587 aaPredicted RBP8.68□□□□□ -1.02
SOX2-OT-218ENST00000498731 ZBTB22O15209 634 aa8.67□□□□□ -1.02
SOX2-OT-218ENST00000498731 BCANQ96GW7 911 aa8.67□□□□□ -1.02
SOX2-OT-218ENST00000498731 MIER1Q8N108 512 aa8.66□□□□□ -1.02
SOX2-OT-218ENST00000498731 CCDC136Q96JN2 1154 aa8.66□□□□□ -1.02
SOX2-OT-218ENST00000498731 SUPT16HQ9Y5B9 1047 aaKnown RBP8.66□□□□□ -1.02
SOX2-OT-218ENST00000498731 BAZ1AQ9NRL2 1556 aaPredicted RBP8.66□□□□□ -1.02
SOX2-OT-218ENST00000498731 PLCB2Q00722 1185 aa8.65□□□□□ -1.02
SOX2-OT-218ENST00000498731 ERCC6Q03468 1493 aa8.64□□□□□ -1.03
SOX2-OT-218ENST00000498731 SALL2Q9Y467 1007 aaPredicted RBP8.62□□□□□ -1.03
SOX2-OT-218ENST00000498731 UBTFP17480 764 aaKnown RBP8.61□□□□□ -1.03
SOX2-OT-218ENST00000498731 CCER1Q8TC90 406 aaPredicted RBP8.6□□□□□ -1.03
SOX2-OT-218ENST00000498731 BAZ1BQ9UIG0 1483 aaKnown RBP8.59□□□□□ -1.03
SOX2-OT-218ENST00000498731 MSH5O43196 834 aa8.59□□□□□ -1.03
SOX2-OT-218ENST00000498731 ATAD2BQ9ULI0 1458 aa8.58□□□□□ -1.04
SOX2-OT-218ENST00000498731 HAP1P54257 671 aaPredicted RBP8.58□□□□□ -1.04
SOX2-OT-218ENST00000498731 SMARCA4P51532 1647 aa8.57□□□□□ -1.04
SOX2-OT-218ENST00000498731 CCDC88BA6NC98 1476 aa8.57□□□□□ -1.04
SOX2-OT-218ENST00000498731 NESP48681 1621 aa8.57□□□□□ -1.04
SOX2-OT-218ENST00000498731 NPM2Q86SE8 214 aaKnown RBP8.54□□□□□ -1.04
SOX2-OT-218ENST00000498731 ABCC8Q09428 1581 aa8.53□□□□□ -1.04
SOX2-OT-218ENST00000498731 TOP2AP11388 1531 aaKnown RBP8.5□□□□□ -1.05
SOX2-OT-218ENST00000498731 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.5□□□□□ -1.05
SOX2-OT-218ENST00000498731 NCAPD3P42695 1498 aa8.5□□□□□ -1.05
SOX2-OT-218ENST00000498731 C14orf37Q86TY3 774 aa8.5□□□□□ -1.05
SOX2-OT-218ENST00000498731 KDM2AQ9Y2K7 1162 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms