RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 CUL7Q14999 1698 aa9.79□□□□□ -0.84
SF3A3-208ENST00000489537 PLCD3Q8N3E9 789 aa9.78□□□□□ -0.84
SF3A3-208ENST00000489537 JPH4Q96JJ6 628 aa9.78□□□□□ -0.84
SF3A3-208ENST00000489537 VPS8Q8N3P4 1428 aa9.78□□□□□ -0.84
SF3A3-208ENST00000489537 PRG4Q92954 1404 aaPredicted RBP9.78□□□□□ -0.84
SF3A3-208ENST00000489537 ZBTB47Q9UFB7 747 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-208ENST00000489537 ZEB1P37275 1124 aaPredicted RBP9.75□□□□□ -0.85
SF3A3-208ENST00000489537 PHF12Q96QT6 1004 aa9.71□□□□□ -0.86
SF3A3-208ENST00000489537 TSPYL2Q9H2G4 693 aaPredicted RBP9.71□□□□□ -0.86
SF3A3-208ENST00000489537 FBXO3Q9UK99 471 aa9.71□□□□□ -0.86
SF3A3-208ENST00000489537 EFCAB5A4FU69 1503 aa9.7□□□□□ -0.86
SF3A3-208ENST00000489537 ADCY10Q96PN6 1610 aa9.7□□□□□ -0.86
SF3A3-208ENST00000489537 KIF13AQ9H1H9 1805 aa9.7□□□□□ -0.86
SF3A3-208ENST00000489537 GALR2O43603 387 aaPredicted RBP9.69□□□□□ -0.86
SF3A3-208ENST00000489537 KIAA0586Q9BVV6 1533 aa9.69□□□□□ -0.86
SF3A3-208ENST00000489537 MAP3K1Q13233 1512 aa9.67□□□□□ -0.86
SF3A3-208ENST00000489537 HRCP23327 699 aa9.67□□□□□ -0.86
SF3A3-208ENST00000489537 LHX8Q68G74 356 aa9.67□□□□□ -0.86
SF3A3-208ENST00000489537 POTEIP0CG38 1075 aa9.66□□□□□ -0.86
SF3A3-208ENST00000489537 FMN1Q68DA7 1419 aa9.65□□□□□ -0.86
SF3A3-208ENST00000489537 TTBK1Q5TCY1 1321 aaPredicted RBP9.65□□□□□ -0.86
SF3A3-208ENST00000489537 ARHGAP35Q9NRY4 1499 aa9.64□□□□□ -0.87
SF3A3-208ENST00000489537 DISP1Q96F81 1524 aa9.63□□□□□ -0.87
SF3A3-208ENST00000489537 ABCC10Q5T3U5 1492 aa9.62□□□□□ -0.87
SF3A3-208ENST00000489537 FAM69CQ0P6D2 419 aa9.62□□□□□ -0.87
SF3A3-208ENST00000489537 CCDC61Q9Y6R9 512 aa9.62□□□□□ -0.87
SF3A3-208ENST00000489537 DIP2BQ9P265 1576 aa9.62□□□□□ -0.87
SF3A3-208ENST00000489537 MAPKBP1O60336 1514 aa9.61□□□□□ -0.87
SF3A3-208ENST00000489537 PTPRGP23470 1445 aa9.6□□□□□ -0.87
SF3A3-208ENST00000489537 MS4A3Q96HJ5 214 aa9.6□□□□□ -0.87
SF3A3-208ENST00000489537 CTTNBP2Q8WZ74 1663 aa9.6□□□□□ -0.87
SF3A3-208ENST00000489537 IQGAP2Q13576 1575 aa9.59□□□□□ -0.87
SF3A3-208ENST00000489537 FYCO1Q9BQS8 1478 aa9.59□□□□□ -0.87
SF3A3-208ENST00000489537 RANGAP1P46060 587 aaPredicted RBP9.58□□□□□ -0.88
SF3A3-208ENST00000489537 RASEFQ8IZ41 740 aa9.58□□□□□ -0.88
SF3A3-208ENST00000489537 FAM212AQ96EL1 285 aa9.58□□□□□ -0.88
SF3A3-208ENST00000489537 CASKIN1Q8WXD9 1431 aa9.57□□□□□ -0.88
SF3A3-208ENST00000489537 ABCC2Q92887 1545 aa9.56□□□□□ -0.88
SF3A3-208ENST00000489537 UGGT2Q9NYU1 1516 aa9.56□□□□□ -0.88
SF3A3-208ENST00000489537 TSPOAP1O95153 1857 aa9.55□□□□□ -0.88
SF3A3-208ENST00000489537 KIF12Q96FN5 646 aa9.55□□□□□ -0.88
SF3A3-208ENST00000489537 ASXL2Q76L83 1435 aa9.55□□□□□ -0.88
SF3A3-208ENST00000489537 PPRC1Q5VV67 1664 aaKnown RBP9.55□□□□□ -0.88
SF3A3-208ENST00000489537 COL17A1Q9UMD9 1497 aaPredicted RBP9.54□□□□□ -0.88
SF3A3-208ENST00000489537 SAMD9Q5K651 1589 aa9.54□□□□□ -0.88
SF3A3-208ENST00000489537 KIAA0556O60303 1618 aa9.53□□□□□ -0.88
SF3A3-208ENST00000489537 UACAQ9BZF9 1416 aa9.53□□□□□ -0.88
SF3A3-208ENST00000489537 UHRF1BP1LA0JNW5 1464 aa9.53□□□□□ -0.88
SF3A3-208ENST00000489537 CCDC18Q5T9S5 1454 aa9.53□□□□□ -0.88
SF3A3-208ENST00000489537 PLB1Q6P1J6 1458 aa9.53□□□□□ -0.88
SF3A3-208ENST00000489537 NUBP1P53384 320 aa9.52□□□□□ -0.89
SF3A3-208ENST00000489537 TIAM1Q13009 1591 aa9.52□□□□□ -0.89
SF3A3-208ENST00000489537 CARMIL2Q6F5E8 1435 aa9.52□□□□□ -0.89
SF3A3-208ENST00000489537 ASTLQ6HA08 431 aaPredicted RBP9.52□□□□□ -0.89
SF3A3-208ENST00000489537 KLHL34Q8N239 644 aa9.52□□□□□ -0.89
SF3A3-208ENST00000489537 KDM4FA0A1W2PPD8 638 aa9.51□□□□□ -0.89
SF3A3-208ENST00000489537 MAP3K13O43283 966 aa9.51□□□□□ -0.89
SF3A3-208ENST00000489537 PPARGC1BQ86YN6 1023 aaKnown RBP9.51□□□□□ -0.89
SF3A3-208ENST00000489537 ACIN1Q9UKV3 1341 aaKnown RBP9.51□□□□□ -0.89
SF3A3-208ENST00000489537 KDM5BQ9UGL1 1544 aa9.51□□□□□ -0.89
SF3A3-208ENST00000489537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.5□□□□□ -0.89
SF3A3-208ENST00000489537 RRBP1Q9P2E9 1410 aaKnown RBP9.5□□□□□ -0.89
SF3A3-208ENST00000489537 VASPP50552 380 aaPredicted RBP9.5□□□□□ -0.89
SF3A3-208ENST00000489537 SLC39A7Q92504 469 aa9.5□□□□□ -0.89
SF3A3-208ENST00000489537 SGIP1Q9BQI5 828 aa9.5□□□□□ -0.89
SF3A3-208ENST00000489537 CLSPNQ9HAW4 1339 aa9.5□□□□□ -0.89
SF3A3-208ENST00000489537 ZCCHC11Q5TAX3 1644 aaKnown RBP9.49□□□□□ -0.89
SF3A3-208ENST00000489537 LRRC9Q6ZRR7 1453 aa9.49□□□□□ -0.89
SF3A3-208ENST00000489537 ATMINO43313 823 aaPredicted RBP9.49□□□□□ -0.89
SF3A3-208ENST00000489537 CDK11AQ9UQ88 783 aaPredicted RBP9.49□□□□□ -0.89
SF3A3-208ENST00000489537 EPRSP07814 1512 aaKnown RBP9.49□□□□□ -0.89
SF3A3-208ENST00000489537 FHOD3Q2V2M9 1422 aa9.48□□□□□ -0.89
SF3A3-208ENST00000489537 C7P10643 843 aa9.48□□□□□ -0.89
SF3A3-208ENST00000489537 P3H3Q8IVL6 736 aa9.48□□□□□ -0.89
SF3A3-208ENST00000489537 CCER1Q8TC90 406 aaPredicted RBP9.48□□□□□ -0.89
SF3A3-208ENST00000489537 PCDHB13Q9Y5F0 798 aa9.48□□□□□ -0.89
SF3A3-208ENST00000489537 GLI2P10070 1586 aa9.48□□□□□ -0.89
SF3A3-208ENST00000489537 KDM6BO15054 1643 aa9.48□□□□□ -0.89
SF3A3-208ENST00000489537 CCNB3Q8WWL7 1395 aa9.48□□□□□ -0.89
SF3A3-208ENST00000489537 ABCA8O94911 1581 aa9.47□□□□□ -0.89
SF3A3-208ENST00000489537 ARID3CA6NKF2 412 aa9.47□□□□□ -0.89
SF3A3-208ENST00000489537 TIE1P35590 1138 aa9.47□□□□□ -0.89
SF3A3-208ENST00000489537 DCAF8Q5TAQ9 597 aa9.47□□□□□ -0.89
SF3A3-208ENST00000489537 CFAP43Q8NDM7 1665 aa9.47□□□□□ -0.89
SF3A3-208ENST00000489537 METRNQ9UJH8 293 aa9.46□□□□□ -0.9
SF3A3-208ENST00000489537 MTUS2Q5JR59 1369 aa9.46□□□□□ -0.9
SF3A3-208ENST00000489537 HECW1Q76N89 1606 aa9.45□□□□□ -0.9
SF3A3-208ENST00000489537 PCF11O94913 1555 aaKnown RBP9.45□□□□□ -0.9
SF3A3-208ENST00000489537 MAP3K4Q9Y6R4 1608 aa9.45□□□□□ -0.9
SF3A3-208ENST00000489537 KANK4Q5T7N3 995 aaPredicted RBP9.44□□□□□ -0.9
SF3A3-208ENST00000489537 PELP1Q8IZL8 1130 aaKnown RBP9.44□□□□□ -0.9
SF3A3-208ENST00000489537 ATP1B4Q9UN42 357 aaPredicted RBP9.44□□□□□ -0.9
SF3A3-208ENST00000489537 EHBP1L1Q8N3D4 1523 aa9.43□□□□□ -0.9
SF3A3-208ENST00000489537 ATN1P54259 1190 aaPredicted RBP9.43□□□□□ -0.9
SF3A3-208ENST00000489537 WDR7Q9Y4E6 1490 aa9.42□□□□□ -0.9
SF3A3-208ENST00000489537 GSE1Q14687 1217 aa9.42□□□□□ -0.9
SF3A3-208ENST00000489537 KCNH8Q96L42 1107 aa9.42□□□□□ -0.9
SF3A3-208ENST00000489537 BMP2KQ9NSY1 1161 aaPredicted RBP9.42□□□□□ -0.9
SF3A3-208ENST00000489537 ATP10BO94823 1461 aa9.41□□□□□ -0.9
SF3A3-208ENST00000489537 MIA2Q96PC5 1412 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms