RNA–Protein interactions for RNA: ENST00000488156.1

ARF4-205, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-205ENST00000488156 FAM9AQ8IZU1 332 aaPredicted RBP11.4□□□□□ -0.58
ARF4-205ENST00000488156 MAP3K4Q9Y6R4 1608 aa11.39□□□□□ -0.59
ARF4-205ENST00000488156 UGGT2Q9NYU1 1516 aa11.37□□□□□ -0.59
ARF4-205ENST00000488156 HSPA2P54652 639 aa11.37□□□□□ -0.59
ARF4-205ENST00000488156 ADAMTSL3P82987 1691 aa11.36□□□□□ -0.59
ARF4-205ENST00000488156 KDM5BQ9UGL1 1544 aa11.35□□□□□ -0.59
ARF4-205ENST00000488156 REM2Q8IYK8 340 aaPredicted RBP11.35□□□□□ -0.59
ARF4-205ENST00000488156 SPDYE1Q8NFV5 336 aaPredicted RBP11.34□□□□□ -0.59
ARF4-205ENST00000488156 EPRSP07814 1512 aaKnown RBP11.34□□□□□ -0.59
ARF4-205ENST00000488156 GOLGA3Q08378 1498 aa11.32□□□□□ -0.6
ARF4-205ENST00000488156 PROM2Q8N271 834 aa11.32□□□□□ -0.6
ARF4-205ENST00000488156 KCNH8Q96L42 1107 aa11.32□□□□□ -0.6
ARF4-205ENST00000488156 STAG3Q9UJ98 1225 aa11.31□□□□□ -0.6
ARF4-205ENST00000488156 PRXQ9BXM0 1461 aa11.31□□□□□ -0.6
ARF4-205ENST00000488156 KIAA0556O60303 1618 aa11.29□□□□□ -0.6
ARF4-205ENST00000488156 WDR7Q9Y4E6 1490 aa11.28□□□□□ -0.6
ARF4-205ENST00000488156 P3H3Q8IVL6 736 aa11.28□□□□□ -0.6
ARF4-205ENST00000488156 MADDQ8WXG6 1647 aa11.27□□□□□ -0.61
ARF4-205ENST00000488156 CD109Q6YHK3 1445 aa11.26□□□□□ -0.61
ARF4-205ENST00000488156 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
ARF4-205ENST00000488156 CLEC11AQ9Y240 323 aa11.25□□□□□ -0.61
ARF4-205ENST00000488156 ZCCHC11Q5TAX3 1644 aaKnown RBP11.24□□□□□ -0.61
ARF4-205ENST00000488156 BCORL1Q5H9F3 1711 aa11.23□□□□□ -0.61
ARF4-205ENST00000488156 ARID3CA6NKF2 412 aa11.23□□□□□ -0.61
ARF4-205ENST00000488156 ABCA8O94911 1581 aa11.22□□□□□ -0.61
ARF4-205ENST00000488156 MAGI3Q5TCQ9 1506 aa11.22□□□□□ -0.61
ARF4-205ENST00000488156 PITPNM1O00562 1244 aa11.21□□□□□ -0.61
ARF4-205ENST00000488156 RIMS1Q86UR5 1692 aaKnown RBP11.2□□□□□ -0.62
ARF4-205ENST00000488156 ATP10BO94823 1461 aa11.19□□□□□ -0.62
ARF4-205ENST00000488156 RANGAP1P46060 587 aaPredicted RBP11.19□□□□□ -0.62
ARF4-205ENST00000488156 EEA1Q15075 1411 aa11.18□□□□□ -0.62
ARF4-205ENST00000488156 PHLDB1Q86UU1 1377 aa11.18□□□□□ -0.62
ARF4-205ENST00000488156 ARID4BQ4LE39 1312 aaPredicted RBP11.18□□□□□ -0.62
ARF4-205ENST00000488156 CTTNBP2Q8WZ74 1663 aa11.17□□□□□ -0.62
ARF4-205ENST00000488156 PLEKHD1A6NEE1 506 aa11.17□□□□□ -0.62
ARF4-205ENST00000488156 CHRDL2Q6WN34 429 aa11.17□□□□□ -0.62
ARF4-205ENST00000488156 PRR29P0C7W0 189 aa11.16□□□□□ -0.62
ARF4-205ENST00000488156 CFAP43Q8NDM7 1665 aa11.15□□□□□ -0.62
ARF4-205ENST00000488156 ARAP3Q8WWN8 1544 aa11.14□□□□□ -0.63
ARF4-205ENST00000488156 YEATS2Q9ULM3 1422 aa11.14□□□□□ -0.63
ARF4-205ENST00000488156 MED1Q15648 1581 aaPredicted RBP11.14□□□□□ -0.63
ARF4-205ENST00000488156 RAPGEF3O95398 923 aa11.13□□□□□ -0.63
ARF4-205ENST00000488156 IQSEC2Q5JU85 1478 aa11.12□□□□□ -0.63
ARF4-205ENST00000488156 STRCQ7RTU9 1775 aa11.12□□□□□ -0.63
ARF4-205ENST00000488156 UBTFP17480 764 aaKnown RBP11.1□□□□□ -0.63
ARF4-205ENST00000488156 LTBP4Q8N2S1 1624 aa11.09□□□□□ -0.63
ARF4-205ENST00000488156 PLEKHG5O94827 1062 aa11.09□□□□□ -0.63
ARF4-205ENST00000488156 FHOD3Q2V2M9 1422 aa11.09□□□□□ -0.63
ARF4-205ENST00000488156 SAMD9Q5K651 1589 aa11.08□□□□□ -0.64
ARF4-205ENST00000488156 NEO1Q92859 1461 aa11.08□□□□□ -0.64
ARF4-205ENST00000488156 NUP153P49790 1475 aaKnown RBP11.07□□□□□ -0.64
ARF4-205ENST00000488156 RAPGEF6Q8TEU7 1601 aa11.06□□□□□ -0.64
ARF4-205ENST00000488156 UBAP1LF5GYI3 381 aa11.06□□□□□ -0.64
ARF4-205ENST00000488156 ATP1B4Q9UN42 357 aaPredicted RBP11.06□□□□□ -0.64
ARF4-205ENST00000488156 ABCA9Q8IUA7 1624 aa11.06□□□□□ -0.64
ARF4-205ENST00000488156 PREX1Q8TCU6 1659 aa11.05□□□□□ -0.64
ARF4-205ENST00000488156 PTPRTO14522 1441 aa11.05□□□□□ -0.64
ARF4-205ENST00000488156 CDK11AQ9UQ88 783 aaPredicted RBP11.05□□□□□ -0.64
ARF4-205ENST00000488156 AKNAQ7Z591 1439 aa11.03□□□□□ -0.64
ARF4-205ENST00000488156 PLCD3Q8N3E9 789 aa11.03□□□□□ -0.64
ARF4-205ENST00000488156 DENND4BO75064 1496 aaPredicted RBP11.02□□□□□ -0.65
ARF4-205ENST00000488156 EFCAB5A4FU69 1503 aa11.01□□□□□ -0.65
ARF4-205ENST00000488156 VASPP50552 380 aaPredicted RBP11.01□□□□□ -0.65
ARF4-205ENST00000488156 FXR2P51116 673 aaKnown RBP eCLIP11.01□□□□□ -0.65
ARF4-205ENST00000488156 MIER1Q8N108 512 aa11.01□□□□□ -0.65
ARF4-205ENST00000488156 POGZQ7Z3K3 1410 aa11.01□□□□□ -0.65
ARF4-205ENST00000488156 FANCAO15360 1455 aa11□□□□□ -0.65
ARF4-205ENST00000488156 FRMPD1Q5SYB0 1578 aa11□□□□□ -0.65
ARF4-205ENST00000488156 TTC37Q6PGP7 1564 aa11□□□□□ -0.65
ARF4-205ENST00000488156 EFCAB2Q5VUJ9 269 aa11□□□□□ -0.65
ARF4-205ENST00000488156 FMN1Q68DA7 1419 aa11□□□□□ -0.65
ARF4-205ENST00000488156 ARHGEF40Q8TER5 1519 aa10.99□□□□□ -0.65
ARF4-205ENST00000488156 HSPA1LP34931 641 aa10.99□□□□□ -0.65
ARF4-205ENST00000488156 FER1L4A9Z1Z3 1794 aa10.98□□□□□ -0.65
ARF4-205ENST00000488156 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
ARF4-205ENST00000488156 PLCH2O75038 1416 aa10.98□□□□□ -0.65
ARF4-205ENST00000488156 PRKAR2AP13861 404 aaKnown RBP10.97□□□□□ -0.65
ARF4-205ENST00000488156 MLECQ14165 292 aa10.97□□□□□ -0.65
ARF4-205ENST00000488156 ZBTB47Q9UFB7 747 aaPredicted RBP10.97□□□□□ -0.65
ARF4-205ENST00000488156 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.97□□□□□ -0.65
ARF4-205ENST00000488156 UHRF1BP1Q6BDS2 1440 aa10.96□□□□□ -0.65
ARF4-205ENST00000488156 SCAPERQ9BY12 1400 aa10.96□□□□□ -0.65
ARF4-205ENST00000488156 SIGLEC1Q9BZZ2 1709 aa10.95□□□□□ -0.66
ARF4-205ENST00000488156 MAGI2Q86UL8 1455 aa10.95□□□□□ -0.66
ARF4-205ENST00000488156 CEBPAP49715 358 aaPredicted RBP10.95□□□□□ -0.66
ARF4-205ENST00000488156 CDK13Q14004 1512 aaKnown RBP10.94□□□□□ -0.66
ARF4-205ENST00000488156 ARHGAP35Q9NRY4 1499 aa10.93□□□□□ -0.66
ARF4-205ENST00000488156 CREBZFQ9NS37 354 aa10.93□□□□□ -0.66
ARF4-205ENST00000488156 MYT1LQ9UL68 1186 aa10.93□□□□□ -0.66
ARF4-205ENST00000488156 AFAP1Q8N556 730 aa10.91□□□□□ -0.66
ARF4-205ENST00000488156 CLIP1P30622 1438 aa10.91□□□□□ -0.66
ARF4-205ENST00000488156 TROQ12816 1431 aaPredicted RBP10.91□□□□□ -0.66
ARF4-205ENST00000488156 CFAP74Q9C0B2 1584 aa10.9□□□□□ -0.66
ARF4-205ENST00000488156 ZNF335Q9H4Z2 1342 aaPredicted RBP10.9□□□□□ -0.66
ARF4-205ENST00000488156 PIP4K2BP78356 416 aa10.9□□□□□ -0.66
ARF4-205ENST00000488156 CHADLQ6NUI6 762 aa10.9□□□□□ -0.66
ARF4-205ENST00000488156 ZFYVE16Q7Z3T8 1539 aa10.89□□□□□ -0.67
ARF4-205ENST00000488156 ATP10AO60312 1499 aa10.89□□□□□ -0.67
ARF4-205ENST00000488156 KLHL34Q8N239 644 aa10.89□□□□□ -0.67
ARF4-205ENST00000488156 ZMYM4Q5VZL5 1548 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms