RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 COL17A1Q9UMD9 1497 aaPredicted RBP9.47□□□□□ -0.89
MACF1-221ENST00000487656 WDR7Q9Y4E6 1490 aa9.47□□□□□ -0.89
MACF1-221ENST00000487656 CD109Q6YHK3 1445 aa9.46□□□□□ -0.9
MACF1-221ENST00000487656 CFAP43Q8NDM7 1665 aa9.45□□□□□ -0.9
MACF1-221ENST00000487656 ILDR1Q86SU0 546 aaPredicted RBP9.44□□□□□ -0.9
MACF1-221ENST00000487656 MAGI3Q5TCQ9 1506 aa9.43□□□□□ -0.9
MACF1-221ENST00000487656 ABCA8O94911 1581 aa9.42□□□□□ -0.9
MACF1-221ENST00000487656 STAG3Q9UJ98 1225 aa9.41□□□□□ -0.9
MACF1-221ENST00000487656 P3H3Q8IVL6 736 aa9.4□□□□□ -0.9
MACF1-221ENST00000487656 PRXQ9BXM0 1461 aa9.4□□□□□ -0.91
MACF1-221ENST00000487656 PHLDB1Q86UU1 1377 aa9.38□□□□□ -0.91
MACF1-221ENST00000487656 HECW2Q9P2P5 1572 aa9.38□□□□□ -0.91
MACF1-221ENST00000487656 ARID3CA6NKF2 412 aa9.38□□□□□ -0.91
MACF1-221ENST00000487656 ARAP3Q8WWN8 1544 aa9.37□□□□□ -0.91
MACF1-221ENST00000487656 IFNLR1Q8IU57 520 aaPredicted RBP9.37□□□□□ -0.91
MACF1-221ENST00000487656 ATP10BO94823 1461 aa9.36□□□□□ -0.91
MACF1-221ENST00000487656 RBM42Q9BTD8 480 aaKnown RBP9.34□□□□□ -0.91
MACF1-221ENST00000487656 KIF21BO75037 1637 aa9.34□□□□□ -0.91
MACF1-221ENST00000487656 ABCA9Q8IUA7 1624 aa9.33□□□□□ -0.92
MACF1-221ENST00000487656 PLEKHD1A6NEE1 506 aa9.32□□□□□ -0.92
MACF1-221ENST00000487656 RAPGEF3O95398 923 aa9.32□□□□□ -0.92
MACF1-221ENST00000487656 KLHL34Q8N239 644 aa9.32□□□□□ -0.92
MACF1-221ENST00000487656 PLCD3Q8N3E9 789 aa9.32□□□□□ -0.92
MACF1-221ENST00000487656 NEO1Q92859 1461 aa9.32□□□□□ -0.92
MACF1-221ENST00000487656 ARID4BQ4LE39 1312 aaPredicted RBP9.31□□□□□ -0.92
MACF1-221ENST00000487656 RAPGEF6Q8TEU7 1601 aa9.31□□□□□ -0.92
MACF1-221ENST00000487656 RANGAP1P46060 587 aaPredicted RBP9.31□□□□□ -0.92
MACF1-221ENST00000487656 SAMD9Q5K651 1589 aa9.3□□□□□ -0.92
MACF1-221ENST00000487656 MIER1Q8N108 512 aa9.3□□□□□ -0.92
MACF1-221ENST00000487656 PTPRMP28827 1452 aa9.28□□□□□ -0.92
MACF1-221ENST00000487656 AKT1S1Q96B36 256 aa9.28□□□□□ -0.92
MACF1-221ENST00000487656 ADAMTSL3P82987 1691 aa9.28□□□□□ -0.92
MACF1-221ENST00000487656 EEA1Q15075 1411 aa9.28□□□□□ -0.92
MACF1-221ENST00000487656 FBXO41Q8TF61 875 aa9.27□□□□□ -0.93
MACF1-221ENST00000487656 BCORL1Q5H9F3 1711 aa9.26□□□□□ -0.93
MACF1-221ENST00000487656 PLEKHG5O94827 1062 aa9.26□□□□□ -0.93
MACF1-221ENST00000487656 NUP153P49790 1475 aaKnown RBP9.26□□□□□ -0.93
MACF1-221ENST00000487656 SPOCK2Q92563 424 aa9.25□□□□□ -0.93
MACF1-221ENST00000487656 DENND4BO75064 1496 aaPredicted RBP9.25□□□□□ -0.93
MACF1-221ENST00000487656 FHOD3Q2V2M9 1422 aa9.24□□□□□ -0.93
MACF1-221ENST00000487656 AKNAQ7Z591 1439 aa9.24□□□□□ -0.93
MACF1-221ENST00000487656 CFAP74Q9C0B2 1584 aa9.24□□□□□ -0.93
MACF1-221ENST00000487656 POGZQ7Z3K3 1410 aa9.23□□□□□ -0.93
MACF1-221ENST00000487656 FANCAO15360 1455 aa9.23□□□□□ -0.93
MACF1-221ENST00000487656 SPDYE1Q8NFV5 336 aaPredicted RBP9.23□□□□□ -0.93
MACF1-221ENST00000487656 FRMPD1Q5SYB0 1578 aa9.23□□□□□ -0.93
MACF1-221ENST00000487656 MADDQ8WXG6 1647 aa9.23□□□□□ -0.93
MACF1-221ENST00000487656 ATP1B4Q9UN42 357 aaPredicted RBP9.22□□□□□ -0.93
MACF1-221ENST00000487656 RICTORQ6R327 1708 aa9.22□□□□□ -0.93
MACF1-221ENST00000487656 EFCAB5A4FU69 1503 aa9.21□□□□□ -0.93
MACF1-221ENST00000487656 RIMS1Q86UR5 1692 aaKnown RBP9.21□□□□□ -0.93
MACF1-221ENST00000487656 CDK11AQ9UQ88 783 aaPredicted RBP9.21□□□□□ -0.94
MACF1-221ENST00000487656 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.21□□□□□ -0.94
MACF1-221ENST00000487656 PCF11O94913 1555 aaKnown RBP9.2□□□□□ -0.94
MACF1-221ENST00000487656 UBTFP17480 764 aaKnown RBP9.2□□□□□ -0.94
MACF1-221ENST00000487656 ZBTB47Q9UFB7 747 aaPredicted RBP9.2□□□□□ -0.94
MACF1-221ENST00000487656 MAGI2Q86UL8 1455 aa9.2□□□□□ -0.94
MACF1-221ENST00000487656 ARHGEF40Q8TER5 1519 aa9.2□□□□□ -0.94
MACF1-221ENST00000487656 MLECQ14165 292 aa9.19□□□□□ -0.94
MACF1-221ENST00000487656 EFCAB2Q5VUJ9 269 aa9.19□□□□□ -0.94
MACF1-221ENST00000487656 LMTK3Q96Q04 1460 aa9.19□□□□□ -0.94
MACF1-221ENST00000487656 PLCH2O75038 1416 aa9.18□□□□□ -0.94
MACF1-221ENST00000487656 ZMYM4Q5VZL5 1548 aa9.18□□□□□ -0.94
MACF1-221ENST00000487656 ZFYVE16Q7Z3T8 1539 aa9.18□□□□□ -0.94
MACF1-221ENST00000487656 REM2Q8IYK8 340 aaPredicted RBP9.18□□□□□ -0.94
MACF1-221ENST00000487656 CLEC11AQ9Y240 323 aa9.18□□□□□ -0.94
MACF1-221ENST00000487656 TTC37Q6PGP7 1564 aa9.17□□□□□ -0.94
MACF1-221ENST00000487656 SCAPERQ9BY12 1400 aa9.17□□□□□ -0.94
MACF1-221ENST00000487656 HSPA2P54652 639 aa9.17□□□□□ -0.94
MACF1-221ENST00000487656 FMN1Q68DA7 1419 aa9.16□□□□□ -0.94
MACF1-221ENST00000487656 YEATS2Q9ULM3 1422 aa9.16□□□□□ -0.94
MACF1-221ENST00000487656 HECW1Q76N89 1606 aa9.16□□□□□ -0.94
MACF1-221ENST00000487656 CDK13Q14004 1512 aaKnown RBP9.15□□□□□ -0.94
MACF1-221ENST00000487656 FER1L4A9Z1Z3 1794 aa9.15□□□□□ -0.94
MACF1-221ENST00000487656 MYO5CQ9NQX4 1742 aa9.15□□□□□ -0.94
MACF1-221ENST00000487656 PKD2Q13563 968 aa9.15□□□□□ -0.94
MACF1-221ENST00000487656 MYT1LQ9UL68 1186 aa9.15□□□□□ -0.94
MACF1-221ENST00000487656 ATP10AO60312 1499 aa9.15□□□□□ -0.95
MACF1-221ENST00000487656 SETD1BQ9UPS6 1966 aaKnown RBP9.14□□□□□ -0.95
MACF1-221ENST00000487656 SLC24A1O60721 1099 aa9.14□□□□□ -0.95
MACF1-221ENST00000487656 PRR29P0C7W0 189 aa9.14□□□□□ -0.95
MACF1-221ENST00000487656 CERKQ8TCT0 537 aa9.13□□□□□ -0.95
MACF1-221ENST00000487656 SIGLEC1Q9BZZ2 1709 aa9.12□□□□□ -0.95
MACF1-221ENST00000487656 CLIP1P30622 1438 aa9.12□□□□□ -0.95
MACF1-221ENST00000487656 C9orf84Q5VXU9 1444 aa9.12□□□□□ -0.95
MACF1-221ENST00000487656 AFAP1Q8N556 730 aa9.11□□□□□ -0.95
MACF1-221ENST00000487656 ESF1Q9H501 851 aaKnown RBP9.11□□□□□ -0.95
MACF1-221ENST00000487656 KIF14Q15058 1648 aa9.11□□□□□ -0.95
MACF1-221ENST00000487656 ZNF518AQ6AHZ1 1483 aa9.1□□□□□ -0.95
MACF1-221ENST00000487656 CEBPAP49715 358 aaPredicted RBP9.1□□□□□ -0.95
MACF1-221ENST00000487656 TROQ12816 1431 aaPredicted RBP9.1□□□□□ -0.95
MACF1-221ENST00000487656 ARHGAP5Q13017 1502 aa9.1□□□□□ -0.95
MACF1-221ENST00000487656 ARHGEF12Q9NZN5 1544 aa9.1□□□□□ -0.95
MACF1-221ENST00000487656 PREX1Q8TCU6 1659 aa9.1□□□□□ -0.95
MACF1-221ENST00000487656 ARHGAP35Q9NRY4 1499 aa9.09□□□□□ -0.95
MACF1-221ENST00000487656 ECM2O94769 699 aaPredicted RBP9.09□□□□□ -0.95
MACF1-221ENST00000487656 CIZ1Q9ULV3 898 aaPredicted RBP9.07□□□□□ -0.96
MACF1-221ENST00000487656 CDC42BPBQ9Y5S2 1711 aa9.07□□□□□ -0.96
MACF1-221ENST00000487656 UHRF1BP1Q6BDS2 1440 aa9.06□□□□□ -0.96
MACF1-221ENST00000487656 KDM5CP41229 1560 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms