RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 AEBP2Q6ZN18 517 aaPredicted RBP16.5■□□□□ 0.23
MACF1-221ENST00000487656 CHIC1Q5VXU3 224 aa16.41■□□□□ 0.22
MACF1-221ENST00000487656 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
MACF1-221ENST00000487656 SENP3Q9H4L4 574 aaPredicted RBP14.02□□□□□ -0.17
MACF1-221ENST00000487656 NISCHQ9Y2I1 1504 aa13.9□□□□□ -0.18
MACF1-221ENST00000487656 PLPPR3Q6T4P5 718 aa13.48□□□□□ -0.25
MACF1-221ENST00000487656 FOXD1Q16676 465 aa12.95□□□□□ -0.34
MACF1-221ENST00000487656 ADRA2BP18089 450 aa12.69□□□□□ -0.38
MACF1-221ENST00000487656 PPP6R1Q9UPN7 881 aa12.66□□□□□ -0.38
MACF1-221ENST00000487656 ABCC9O60706 1549 aa12.62□□□□□ -0.39
MACF1-221ENST00000487656 CCDC180Q9P1Z9 1646 aa12.52□□□□□ -0.4
MACF1-221ENST00000487656 PIAS4Q8N2W9 510 aaPredicted RBP12.3□□□□□ -0.44
MACF1-221ENST00000487656 RB1CC1Q8TDY2 1594 aa11.99□□□□□ -0.49
MACF1-221ENST00000487656 DNAJC5BQ9UF47 199 aa11.92□□□□□ -0.5
MACF1-221ENST00000487656 KCNA4P22459 653 aa11.91□□□□□ -0.5
MACF1-221ENST00000487656 PPP4R3CPQ6ZMV5 832 aa11.9□□□□□ -0.5
MACF1-221ENST00000487656 NACADO15069 1562 aa11.88□□□□□ -0.51
MACF1-221ENST00000487656 MSH5O43196 834 aa11.87□□□□□ -0.51
MACF1-221ENST00000487656 DCAF8L2P0C7V8 631 aa11.87□□□□□ -0.51
MACF1-221ENST00000487656 PABPN1Q86U42 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
MACF1-221ENST00000487656 NCBP3Q53F19 620 aaKnown RBP11.71□□□□□ -0.53
MACF1-221ENST00000487656 UNC13AQ9UPW8 1703 aa11.7□□□□□ -0.54
MACF1-221ENST00000487656 MYO15BQ96JP2 1530 aa11.67□□□□□ -0.54
MACF1-221ENST00000487656 SCAF1Q9H7N4 1312 aaKnown RBP11.66□□□□□ -0.54
MACF1-221ENST00000487656 BICRAQ9NZM4 1560 aa11.59□□□□□ -0.55
MACF1-221ENST00000487656 CNKSR2Q8WXI2 1034 aa11.51□□□□□ -0.57
MACF1-221ENST00000487656 NPM3O75607 178 aaKnown RBP11.48□□□□□ -0.57
MACF1-221ENST00000487656 DCAF1Q9Y4B6 1507 aa11.48□□□□□ -0.57
MACF1-221ENST00000487656 ZCCHC6Q5VYS8 1495 aaKnown RBP11.47□□□□□ -0.57
MACF1-221ENST00000487656 SHROOM4Q9ULL8 1493 aa11.45□□□□□ -0.58
MACF1-221ENST00000487656 MAPK8IP2Q13387 824 aaPredicted RBP11.43□□□□□ -0.58
MACF1-221ENST00000487656 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
MACF1-221ENST00000487656 EHMT2Q96KQ7 1210 aa11.4□□□□□ -0.58
MACF1-221ENST00000487656 CC2D2AQ9P2K1 1620 aa11.39□□□□□ -0.59
MACF1-221ENST00000487656 SCRIBQ14160 1630 aa11.38□□□□□ -0.59
MACF1-221ENST00000487656 CECR2Q9BXF3 1484 aa11.38□□□□□ -0.59
MACF1-221ENST00000487656 EIF4G1Q04637 1599 aaKnown RBP11.33□□□□□ -0.6
MACF1-221ENST00000487656 RNF216Q9NWF9 866 aaPredicted RBP11.21□□□□□ -0.61
MACF1-221ENST00000487656 DMRT2Q9Y5R5 561 aa11.21□□□□□ -0.61
MACF1-221ENST00000487656 CSRNP3Q8WYN3 585 aa11.12□□□□□ -0.63
MACF1-221ENST00000487656 HOXD11P31277 338 aaPredicted RBP11.08□□□□□ -0.64
MACF1-221ENST00000487656 DNAJC5Q9H3Z4 198 aa11.06□□□□□ -0.64
MACF1-221ENST00000487656 NCAPD3P42695 1498 aa10.96□□□□□ -0.65
MACF1-221ENST00000487656 ZBTB22O15209 634 aa10.93□□□□□ -0.66
MACF1-221ENST00000487656 CUX2O14529 1486 aa10.93□□□□□ -0.66
MACF1-221ENST00000487656 ERCC6Q03468 1493 aa10.93□□□□□ -0.66
MACF1-221ENST00000487656 FOXD4L1Q9NU39 408 aa10.9□□□□□ -0.66
MACF1-221ENST00000487656 ATAD2BQ9ULI0 1458 aa10.89□□□□□ -0.67
MACF1-221ENST00000487656 SMARCA2P51531 1590 aa10.89□□□□□ -0.67
MACF1-221ENST00000487656 SMARCA4P51532 1647 aa10.86□□□□□ -0.67
MACF1-221ENST00000487656 HMGXB3Q12766 1538 aa10.85□□□□□ -0.67
MACF1-221ENST00000487656 BAZ1AQ9NRL2 1556 aaPredicted RBP10.81□□□□□ -0.68
MACF1-221ENST00000487656 BAZ1BQ9UIG0 1483 aaKnown RBP10.81□□□□□ -0.68
MACF1-221ENST00000487656 NESP48681 1621 aa10.79□□□□□ -0.68
MACF1-221ENST00000487656 DCAF8L1A6NGE4 600 aa10.77□□□□□ -0.69
MACF1-221ENST00000487656 SLC4A2P04920 1241 aa10.76□□□□□ -0.69
MACF1-221ENST00000487656 PEG3Q9GZU2 1588 aa10.75□□□□□ -0.69
MACF1-221ENST00000487656 LAMC3Q9Y6N6 1575 aa10.73□□□□□ -0.69
MACF1-221ENST00000487656 MROH2BQ7Z745 1585 aa10.69□□□□□ -0.7
MACF1-221ENST00000487656 PDS5BQ9NTI5 1447 aa10.69□□□□□ -0.7
MACF1-221ENST00000487656 THOC2Q8NI27 1593 aaKnown RBP10.69□□□□□ -0.7
MACF1-221ENST00000487656 KIF21AQ7Z4S6 1674 aa10.66□□□□□ -0.7
MACF1-221ENST00000487656 CADPSQ9ULU8 1353 aa10.64□□□□□ -0.71
MACF1-221ENST00000487656 MYCNP04198 464 aaPredicted RBP10.63□□□□□ -0.71
MACF1-221ENST00000487656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.62□□□□□ -0.711e-7■□□□□ 11.2
MACF1-221ENST00000487656 WIZO95785 1651 aa10.57□□□□□ -0.72
MACF1-221ENST00000487656 MRC2Q9UBG0 1479 aa10.57□□□□□ -0.72
MACF1-221ENST00000487656 TRIM41Q8WV44 630 aa10.54□□□□□ -0.72
MACF1-221ENST00000487656 WDR62O43379 1518 aa10.53□□□□□ -0.72
MACF1-221ENST00000487656 CEP164Q9UPV0 1460 aa10.52□□□□□ -0.73
MACF1-221ENST00000487656 ATXN8OSP0DMR3 200 aa10.51□□□□□ -0.73
MACF1-221ENST00000487656 FANCD2Q9BXW9 1451 aa10.49□□□□□ -0.73
MACF1-221ENST00000487656 OSCARQ8IYS5 282 aa10.47□□□□□ -0.73
MACF1-221ENST00000487656 CFTRP13569 1480 aa10.47□□□□□ -0.73
MACF1-221ENST00000487656 RSF1Q96T23 1441 aaPredicted RBP10.45□□□□□ -0.74
MACF1-221ENST00000487656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.44□□□□□ -0.74
MACF1-221ENST00000487656 HNRNPUL2Q1KMD3 747 aaKnown RBP10.44□□□□□ -0.74
MACF1-221ENST00000487656 TOP2AP11388 1531 aaKnown RBP10.43□□□□□ -0.74
MACF1-221ENST00000487656 U3KPZ7 1027 aaPredicted RBP10.42□□□□□ -0.74
MACF1-221ENST00000487656 SAMD1Q6SPF0 538 aaPredicted RBP10.4□□□□□ -0.74
MACF1-221ENST00000487656 URB2Q14146 1524 aaKnown RBP10.39□□□□□ -0.75
MACF1-221ENST00000487656 PRDM2Q13029 1718 aa10.38□□□□□ -0.75
MACF1-221ENST00000487656 CCDC88BA6NC98 1476 aa10.32□□□□□ -0.76
MACF1-221ENST00000487656 IFT140Q96RY7 1462 aa10.32□□□□□ -0.76
MACF1-221ENST00000487656 ABCC8Q09428 1581 aa10.31□□□□□ -0.76
MACF1-221ENST00000487656 POTEDQ86YR6 584 aa10.3□□□□□ -0.76
MACF1-221ENST00000487656 TOPBP1Q92547 1522 aa10.28□□□□□ -0.76
MACF1-221ENST00000487656 ATF5Q9Y2D1 282 aaPredicted RBP10.28□□□□□ -0.76
MACF1-221ENST00000487656 ZNF608Q9ULD9 1512 aaPredicted RBP10.28□□□□□ -0.76
MACF1-221ENST00000487656 RIMBP3CA6NJZ7 1639 aa10.27□□□□□ -0.77
MACF1-221ENST00000487656 RIMBP3BA6NNM3 1639 aa10.27□□□□□ -0.77
MACF1-221ENST00000487656 RIMBP3Q9UFD9 1639 aa10.27□□□□□ -0.77
MACF1-221ENST00000487656 APLP2Q06481 763 aa10.27□□□□□ -0.77
MACF1-221ENST00000487656 DNMBPQ6XZF7 1577 aa10.23□□□□□ -0.77
MACF1-221ENST00000487656 ARHGEF11O15085 1522 aa10.23□□□□□ -0.77
MACF1-221ENST00000487656 FBLN2P98095 1184 aa10.22□□□□□ -0.77
MACF1-221ENST00000487656 CYB5RLQ6IPT4 315 aa10.22□□□□□ -0.77
MACF1-221ENST00000487656 EIF4G3O43432 1585 aaKnown RBP10.22□□□□□ -0.77
MACF1-221ENST00000487656 AQRO60306 1485 aaKnown RBP eCLIP10.2□□□□□ -0.783e-7■■■■■ 36.6
MACF1-221ENST00000487656 CHD1O14646 1710 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms