RNA–Protein interactions for RNA: ENST00000465900.5

SND1-204, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-204ENST00000465900 BCORL1Q5H9F3 1711 aa9.62□□□□□ -0.87
SND1-204ENST00000465900 WDR7Q9Y4E6 1490 aa9.62□□□□□ -0.87
SND1-204ENST00000465900 KCNH8Q96L42 1107 aa9.62□□□□□ -0.87
SND1-204ENST00000465900 ARAP3Q8WWN8 1544 aa9.61□□□□□ -0.87
SND1-204ENST00000465900 ZCCHC11Q5TAX3 1644 aaKnown RBP9.61□□□□□ -0.87
SND1-204ENST00000465900 KLHL34Q8N239 644 aa9.61□□□□□ -0.87
SND1-204ENST00000465900 DISP1Q96F81 1524 aa9.61□□□□□ -0.87
SND1-204ENST00000465900 BIVM-ERCC5R4GMW8 1640 aa9.59□□□□□ -0.87
SND1-204ENST00000465900 ARID4BQ4LE39 1312 aaPredicted RBP9.58□□□□□ -0.88
SND1-204ENST00000465900 LTBP4Q8N2S1 1624 aa9.58□□□□□ -0.88
SND1-204ENST00000465900 RIMS1Q86UR5 1692 aaKnown RBP9.58□□□□□ -0.88
SND1-204ENST00000465900 CARMIL2Q6F5E8 1435 aa9.57□□□□□ -0.88
SND1-204ENST00000465900 YEATS2Q9ULM3 1422 aa9.56□□□□□ -0.88
SND1-204ENST00000465900 STRCQ7RTU9 1775 aa9.56□□□□□ -0.88
SND1-204ENST00000465900 POTEDQ86YR6 584 aa9.54□□□□□ -0.88
SND1-204ENST00000465900 FRMPD1Q5SYB0 1578 aa9.54□□□□□ -0.88
SND1-204ENST00000465900 CFAP43Q8NDM7 1665 aa9.53□□□□□ -0.88
SND1-204ENST00000465900 CEBPAP49715 358 aaPredicted RBP9.53□□□□□ -0.88
SND1-204ENST00000465900 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.53□□□□□ -0.88
SND1-204ENST00000465900 SIGLEC1Q9BZZ2 1709 aa9.53□□□□□ -0.88
SND1-204ENST00000465900 FBXO3Q9UK99 471 aa9.5□□□□□ -0.89
SND1-204ENST00000465900 MED1Q15648 1581 aaPredicted RBP9.5□□□□□ -0.89
SND1-204ENST00000465900 PTPRTO14522 1441 aa9.49□□□□□ -0.89
SND1-204ENST00000465900 HSPA1LP34931 641 aa9.49□□□□□ -0.89
SND1-204ENST00000465900 MLECQ14165 292 aa9.49□□□□□ -0.89
SND1-204ENST00000465900 CARMIL1Q5VZK9 1371 aa9.49□□□□□ -0.89
SND1-204ENST00000465900 UBAP1LF5GYI3 381 aa9.48□□□□□ -0.89
SND1-204ENST00000465900 NBR1Q14596 966 aa9.48□□□□□ -0.89
SND1-204ENST00000465900 BCL11AQ9H165 835 aa9.48□□□□□ -0.89
SND1-204ENST00000465900 IQGAP2Q13576 1575 aa9.47□□□□□ -0.89
SND1-204ENST00000465900 BBXQ8WY36 941 aaPredicted RBP9.47□□□□□ -0.89
SND1-204ENST00000465900 IQSEC2Q5JU85 1478 aa9.47□□□□□ -0.89
SND1-204ENST00000465900 PAXIP1Q6ZW49 1069 aaPredicted RBP9.46□□□□□ -0.9
SND1-204ENST00000465900 NPM2Q86SE8 214 aaKnown RBP9.46□□□□□ -0.9
SND1-204ENST00000465900 ARID3CA6NKF2 412 aa9.45□□□□□ -0.9
SND1-204ENST00000465900 RGS17Q9UGC6 210 aaPredicted RBP9.45□□□□□ -0.9
SND1-204ENST00000465900 PHLDB1Q86UU1 1377 aa9.45□□□□□ -0.9
SND1-204ENST00000465900 UGGT2Q9NYU1 1516 aa9.45□□□□□ -0.9
SND1-204ENST00000465900 CFAP44Q96MT7 982 aa9.44□□□□□ -0.9
SND1-204ENST00000465900 ARHGEF40Q8TER5 1519 aa9.44□□□□□ -0.9
SND1-204ENST00000465900 ABCA8O94911 1581 aa9.43□□□□□ -0.9
SND1-204ENST00000465900 TTC37Q6PGP7 1564 aa9.43□□□□□ -0.9
SND1-204ENST00000465900 ZNF335Q9H4Z2 1342 aaPredicted RBP9.43□□□□□ -0.9
SND1-204ENST00000465900 KIAA0556O60303 1618 aa9.42□□□□□ -0.9
SND1-204ENST00000465900 NEO1Q92859 1461 aa9.41□□□□□ -0.9
SND1-204ENST00000465900 ATP10BO94823 1461 aa9.4□□□□□ -0.9
SND1-204ENST00000465900 FHOD3Q2V2M9 1422 aa9.4□□□□□ -0.9
SND1-204ENST00000465900 KIF27Q86VH2 1401 aa9.4□□□□□ -0.9
SND1-204ENST00000465900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.4□□□□□ -0.9
SND1-204ENST00000465900 SRCAPQ6ZRS2 3230 aa9.4□□□□□ -0.91
SND1-204ENST00000465900 ARHGEF12Q9NZN5 1544 aa9.4□□□□□ -0.91
SND1-204ENST00000465900 PREX1Q8TCU6 1659 aa9.39□□□□□ -0.91
SND1-204ENST00000465900 ABCA9Q8IUA7 1624 aa9.39□□□□□ -0.91
SND1-204ENST00000465900 SAMD1Q6SPF0 538 aaPredicted RBP9.39□□□□□ -0.91
SND1-204ENST00000465900 AKNAQ7Z591 1439 aa9.39□□□□□ -0.91
SND1-204ENST00000465900 NCOA1Q15788 1441 aa9.38□□□□□ -0.91
SND1-204ENST00000465900 UHRF1BP1Q6BDS2 1440 aa9.38□□□□□ -0.91
SND1-204ENST00000465900 POGZQ7Z3K3 1410 aa9.38□□□□□ -0.91
SND1-204ENST00000465900 FANCAO15360 1455 aa9.37□□□□□ -0.91
SND1-204ENST00000465900 DENND4BO75064 1496 aaPredicted RBP9.37□□□□□ -0.91
SND1-204ENST00000465900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.37□□□□□ -0.91
SND1-204ENST00000465900 PKD2Q13563 968 aa9.37□□□□□ -0.91
SND1-204ENST00000465900 HNRNPUL2Q1KMD3 747 aaKnown RBP9.37□□□□□ -0.91
SND1-204ENST00000465900 U3KPZ7 1027 aaPredicted RBP9.37□□□□□ -0.91
SND1-204ENST00000465900 NCKAP5LQ9HCH0 1330 aa9.36□□□□□ -0.91
SND1-204ENST00000465900 PIP4K2BP78356 416 aa9.36□□□□□ -0.91
SND1-204ENST00000465900 RICTORQ6R327 1708 aa9.36□□□□□ -0.91
SND1-204ENST00000465900 FER1L4A9Z1Z3 1794 aa9.35□□□□□ -0.91
SND1-204ENST00000465900 DCAF8L1A6NGE4 600 aa9.35□□□□□ -0.91
SND1-204ENST00000465900 TSHZ2Q9NRE2 1034 aa9.35□□□□□ -0.91
SND1-204ENST00000465900 SUPT5HO00267 1087 aaKnown RBP9.34□□□□□ -0.91
SND1-204ENST00000465900 POTEAQ6S8J7 498 aa9.33□□□□□ -0.92
SND1-204ENST00000465900 ZMYM4Q5VZL5 1548 aa9.32□□□□□ -0.92
SND1-204ENST00000465900 ZFYVE16Q7Z3T8 1539 aa9.32□□□□□ -0.92
SND1-204ENST00000465900 PLEKHG5O94827 1062 aa9.32□□□□□ -0.92
SND1-204ENST00000465900 ZNF219Q9P2Y4 722 aaPredicted RBP9.32□□□□□ -0.92
SND1-204ENST00000465900 ALKQ9UM73 1620 aa9.31□□□□□ -0.92
SND1-204ENST00000465900 HECW1Q76N89 1606 aa9.31□□□□□ -0.92
SND1-204ENST00000465900 SETD1BQ9UPS6 1966 aaKnown RBP9.3□□□□□ -0.92
SND1-204ENST00000465900 VASPP50552 380 aaPredicted RBP9.29□□□□□ -0.92
SND1-204ENST00000465900 SPRYD3Q8NCJ5 442 aa9.29□□□□□ -0.92
SND1-204ENST00000465900 MAGI2Q86UL8 1455 aa9.28□□□□□ -0.92
SND1-204ENST00000465900 SPDYE4A6NLX3 237 aa9.28□□□□□ -0.92
SND1-204ENST00000465900 ATP10AO60312 1499 aa9.28□□□□□ -0.92
SND1-204ENST00000465900 EFCAB5A4FU69 1503 aa9.27□□□□□ -0.93
SND1-204ENST00000465900 TRIM26Q12899 539 aaPredicted RBP9.27□□□□□ -0.93
SND1-204ENST00000465900 P3H3Q8IVL6 736 aa9.27□□□□□ -0.93
SND1-204ENST00000465900 TRAPPC8Q9Y2L5 1435 aa9.27□□□□□ -0.93
SND1-204ENST00000465900 RAPGEF2Q9Y4G8 1499 aa9.27□□□□□ -0.93
SND1-204ENST00000465900 CAMSAP1Q5T5Y3 1602 aa9.27□□□□□ -0.93
SND1-204ENST00000465900 C9orf84Q5VXU9 1444 aa9.25□□□□□ -0.93
SND1-204ENST00000465900 IFNLR1Q8IU57 520 aaPredicted RBP9.25□□□□□ -0.93
SND1-204ENST00000465900 TOM1O60784 492 aa9.24□□□□□ -0.93
SND1-204ENST00000465900 PROM2Q8N271 834 aa9.24□□□□□ -0.93
SND1-204ENST00000465900 SCAPERQ9BY12 1400 aa9.23□□□□□ -0.93
SND1-204ENST00000465900 C3P01024 1663 aa9.23□□□□□ -0.93
SND1-204ENST00000465900 MKRN4PQ13434 485 aaPredicted RBP9.23□□□□□ -0.93
SND1-204ENST00000465900 GOLGA3Q08378 1498 aa9.21□□□□□ -0.93
SND1-204ENST00000465900 TCOF1Q13428 1488 aaKnown RBP9.21□□□□□ -0.93
SND1-204ENST00000465900 UBTFP17480 764 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms