RNA–Protein interactions for RNA: ENST00000465900.5

SND1-204, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-204ENST00000465900 CHIC1Q5VXU3 224 aa14.81□□□□□ -0.04
SND1-204ENST00000465900 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.08
SND1-204ENST00000465900 NISCHQ9Y2I1 1504 aa13.8□□□□□ -0.2
SND1-204ENST00000465900 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
SND1-204ENST00000465900 ABCC9O60706 1549 aa13.39□□□□□ -0.27
SND1-204ENST00000465900 PHF23Q9BUL5 403 aaPredicted RBP13.19□□□□□ -0.3
SND1-204ENST00000465900 DNAJC5Q9H3Z4 198 aa12.65□□□□□ -0.38
SND1-204ENST00000465900 CCDC180Q9P1Z9 1646 aa12.51□□□□□ -0.41
SND1-204ENST00000465900 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
SND1-204ENST00000465900 RB1CC1Q8TDY2 1594 aa12.28□□□□□ -0.44
SND1-204ENST00000465900 PLPPR3Q6T4P5 718 aa12.28□□□□□ -0.44
SND1-204ENST00000465900 SENP3Q9H4L4 574 aaPredicted RBP12.13□□□□□ -0.47
SND1-204ENST00000465900 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
SND1-204ENST00000465900 CECR2Q9BXF3 1484 aa12.1□□□□□ -0.47
SND1-204ENST00000465900 SLC24A1O60721 1099 aa12.1□□□□□ -0.47
SND1-204ENST00000465900 NACADO15069 1562 aa12.06□□□□□ -0.48
SND1-204ENST00000465900 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
SND1-204ENST00000465900 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
SND1-204ENST00000465900 DCAF8L2P0C7V8 631 aa11.97□□□□□ -0.49
SND1-204ENST00000465900 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
SND1-204ENST00000465900 EIF4G1Q04637 1599 aaKnown RBP11.8□□□□□ -0.52
SND1-204ENST00000465900 TRIM41Q8WV44 630 aa11.77□□□□□ -0.53
SND1-204ENST00000465900 CUX2O14529 1486 aa11.71□□□□□ -0.53
SND1-204ENST00000465900 SHROOM4Q9ULL8 1493 aa11.68□□□□□ -0.54
SND1-204ENST00000465900 MYO15BQ96JP2 1530 aa11.67□□□□□ -0.54
SND1-204ENST00000465900 ADRA2BP18089 450 aa11.6□□□□□ -0.55
SND1-204ENST00000465900 SCRIBQ14160 1630 aa11.49□□□□□ -0.57
SND1-204ENST00000465900 KCNA4P22459 653 aa11.49□□□□□ -0.57
SND1-204ENST00000465900 ERCC6Q03468 1493 aa11.49□□□□□ -0.57
SND1-204ENST00000465900 PPP6R1Q9UPN7 881 aa11.43□□□□□ -0.58
SND1-204ENST00000465900 NESP48681 1621 aa11.35□□□□□ -0.59
SND1-204ENST00000465900 DCAF1Q9Y4B6 1507 aa11.29□□□□□ -0.6
SND1-204ENST00000465900 ZCCHC6Q5VYS8 1495 aaKnown RBP11.28□□□□□ -0.6
SND1-204ENST00000465900 FOXD1Q16676 465 aa11.27□□□□□ -0.61
SND1-204ENST00000465900 THOC2Q8NI27 1593 aaKnown RBP11.27□□□□□ -0.61
SND1-204ENST00000465900 CSRNP3Q8WYN3 585 aa11.26□□□□□ -0.61
SND1-204ENST00000465900 NCAPD3P42695 1498 aa11.25□□□□□ -0.61
SND1-204ENST00000465900 RTN4Q9NQC3 1192 aaKnown RBP11.23□□□□□ -0.61
SND1-204ENST00000465900 MYT1Q01538 1121 aa11.19□□□□□ -0.62
SND1-204ENST00000465900 AMER1Q5JTC6 1135 aaPredicted RBP11.19□□□□□ -0.62
SND1-204ENST00000465900 TTBK1Q5TCY1 1321 aaPredicted RBP11.13□□□□□ -0.63
SND1-204ENST00000465900 OSCARQ8IYS5 282 aa11.13□□□□□ -0.63
SND1-204ENST00000465900 ATAD2BQ9ULI0 1458 aa11.12□□□□□ -0.63
SND1-204ENST00000465900 SMARCA2P51531 1590 aa11.12□□□□□ -0.63
SND1-204ENST00000465900 BAZ1AQ9NRL2 1556 aaPredicted RBP11.04□□□□□ -0.64
SND1-204ENST00000465900 RIMBP3CA6NJZ7 1639 aa11.03□□□□□ -0.64
SND1-204ENST00000465900 RIMBP3BA6NNM3 1639 aa11.03□□□□□ -0.64
SND1-204ENST00000465900 RIMBP3Q9UFD9 1639 aa11.03□□□□□ -0.64
SND1-204ENST00000465900 KIF21AQ7Z4S6 1674 aa11.03□□□□□ -0.64
SND1-204ENST00000465900 SLC4A1APQ9BWU0 796 aaKnown RBP11.01□□□□□ -0.65
SND1-204ENST00000465900 HMGXB3Q12766 1538 aa10.99□□□□□ -0.65
SND1-204ENST00000465900 TRHP20396 242 aaPredicted RBP10.99□□□□□ -0.65
SND1-204ENST00000465900 PDS5BQ9NTI5 1447 aa10.98□□□□□ -0.65
SND1-204ENST00000465900 LAMC3Q9Y6N6 1575 aa10.98□□□□□ -0.65
SND1-204ENST00000465900 CYB5RLQ6IPT4 315 aa10.97□□□□□ -0.65
SND1-204ENST00000465900 DAXXQ9UER7 740 aaPredicted RBP10.96□□□□□ -0.65
SND1-204ENST00000465900 ARHGEF11O15085 1522 aa10.95□□□□□ -0.66
SND1-204ENST00000465900 PPP4R3CPQ6ZMV5 832 aa10.95□□□□□ -0.66
SND1-204ENST00000465900 WDR62O43379 1518 aa10.94□□□□□ -0.66
SND1-204ENST00000465900 MRC2Q9UBG0 1479 aa10.94□□□□□ -0.66
SND1-204ENST00000465900 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
SND1-204ENST00000465900 PELP1Q8IZL8 1130 aaKnown RBP10.91□□□□□ -0.66
SND1-204ENST00000465900 BAZ1BQ9UIG0 1483 aaKnown RBP10.88□□□□□ -0.67
SND1-204ENST00000465900 NCBP3Q53F19 620 aaKnown RBP10.87□□□□□ -0.67
SND1-204ENST00000465900 CADPSQ9ULU8 1353 aa10.87□□□□□ -0.67
SND1-204ENST00000465900 SMARCA4P51532 1647 aa10.86□□□□□ -0.67
SND1-204ENST00000465900 ARAP1Q96P48 1450 aa10.85□□□□□ -0.67
SND1-204ENST00000465900 PEG3Q9GZU2 1588 aa10.76□□□□□ -0.69
SND1-204ENST00000465900 ZNF608Q9ULD9 1512 aaPredicted RBP10.74□□□□□ -0.69
SND1-204ENST00000465900 CEP164Q9UPV0 1460 aa10.74□□□□□ -0.69
SND1-204ENST00000465900 URB2Q14146 1524 aaKnown RBP10.73□□□□□ -0.69
SND1-204ENST00000465900 PIAS4Q8N2W9 510 aaPredicted RBP10.72□□□□□ -0.69
SND1-204ENST00000465900 FANCD2Q9BXW9 1451 aa10.72□□□□□ -0.69
SND1-204ENST00000465900 NPM3O75607 178 aaKnown RBP10.71□□□□□ -0.69
SND1-204ENST00000465900 MROH2BQ7Z745 1585 aa10.68□□□□□ -0.7
SND1-204ENST00000465900 ERICH6Q7L0X2 663 aa10.64□□□□□ -0.71
SND1-204ENST00000465900 APLP2Q06481 763 aa10.63□□□□□ -0.71
SND1-204ENST00000465900 ZBTB22O15209 634 aa10.62□□□□□ -0.71
SND1-204ENST00000465900 RSF1Q96T23 1441 aaPredicted RBP10.61□□□□□ -0.71
SND1-204ENST00000465900 KDM4FA0A1W2PPD8 638 aa10.61□□□□□ -0.71
SND1-204ENST00000465900 CFTRP13569 1480 aa10.6□□□□□ -0.71
SND1-204ENST00000465900 IFT140Q96RY7 1462 aa10.56□□□□□ -0.72
SND1-204ENST00000465900 AQRO60306 1485 aaKnown RBP eCLIP10.55□□□□□ -0.724e-8■■■■■ 34.1
SND1-204ENST00000465900 FBLN2P98095 1184 aa10.54□□□□□ -0.72
SND1-204ENST00000465900 CHD1O14646 1710 aa10.53□□□□□ -0.72
SND1-204ENST00000465900 EIF4G3O43432 1585 aaKnown RBP10.51□□□□□ -0.73
SND1-204ENST00000465900 CLASP1Q7Z460 1538 aa10.48□□□□□ -0.73
SND1-204ENST00000465900 PRKCSHP14314 528 aaPredicted RBP10.46□□□□□ -0.73
SND1-204ENST00000465900 CNKSR2Q8WXI2 1034 aa10.46□□□□□ -0.73
SND1-204ENST00000465900 WIZO95785 1651 aa10.46□□□□□ -0.74
SND1-204ENST00000465900 TOPBP1Q92547 1522 aa10.44□□□□□ -0.74
SND1-204ENST00000465900 GAPVD1Q14C86 1478 aa10.42□□□□□ -0.74
SND1-204ENST00000465900 TARBP1Q13395 1621 aaKnown RBP10.4□□□□□ -0.75
SND1-204ENST00000465900 TDRD9Q8NDG6 1382 aaKnown RBP10.38□□□□□ -0.75
SND1-204ENST00000465900 ERCC6L2Q5T890 1561 aa10.36□□□□□ -0.75
SND1-204ENST00000465900 SNAPC4Q5SXM2 1469 aa10.36□□□□□ -0.75
SND1-204ENST00000465900 RAD54L2Q9Y4B4 1467 aa10.35□□□□□ -0.75
SND1-204ENST00000465900 CHMP7Q8WUX9 453 aaPredicted RBP10.34□□□□□ -0.75
SND1-204ENST00000465900 BCANQ96GW7 911 aa10.34□□□□□ -0.75
SND1-204ENST00000465900 TAOK2Q9UL54 1235 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms