RNA–Protein interactions for RNA: ENST00000437733.5

TRAPPC12-208, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 518 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-208ENST00000437733 IFT140Q96RY7 1462 aa9.95□□□□□ -0.82
TRAPPC12-208ENST00000437733 CLIP1P30622 1438 aa9.94□□□□□ -0.82
TRAPPC12-208ENST00000437733 TDRD9Q8NDG6 1382 aaKnown RBP9.94□□□□□ -0.82
TRAPPC12-208ENST00000437733 SLC39A7Q92504 469 aa9.94□□□□□ -0.82
TRAPPC12-208ENST00000437733 METRNQ9UJH8 293 aa9.94□□□□□ -0.82
TRAPPC12-208ENST00000437733 C7P10643 843 aa9.93□□□□□ -0.82
TRAPPC12-208ENST00000437733 ATN1P54259 1190 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC12-208ENST00000437733 FAM212AQ96EL1 285 aa9.93□□□□□ -0.82
TRAPPC12-208ENST00000437733 ARXQ96QS3 562 aa9.93□□□□□ -0.82
TRAPPC12-208ENST00000437733 SGIP1Q9BQI5 828 aa9.93□□□□□ -0.82
TRAPPC12-208ENST00000437733 TIE1P35590 1138 aa9.92□□□□□ -0.82
TRAPPC12-208ENST00000437733 VASPP50552 380 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC12-208ENST00000437733 OTUD5Q96G74 571 aa9.91□□□□□ -0.82
TRAPPC12-208ENST00000437733 CTTNBP2Q8WZ74 1663 aa9.9□□□□□ -0.82
TRAPPC12-208ENST00000437733 AQRO60306 1485 aaKnown RBP eCLIP9.88□□□□□ -0.83
TRAPPC12-208ENST00000437733 GRIN2BQ13224 1484 aa9.88□□□□□ -0.83
TRAPPC12-208ENST00000437733 RANGAP1P46060 587 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC12-208ENST00000437733 HAP1P54257 671 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC12-208ENST00000437733 PCDHB13Q9Y5F0 798 aa9.88□□□□□ -0.83
TRAPPC12-208ENST00000437733 EIF4G3O43432 1585 aaKnown RBP9.88□□□□□ -0.83
TRAPPC12-208ENST00000437733 ADAMTS12P58397 1594 aa9.87□□□□□ -0.83
TRAPPC12-208ENST00000437733 ZNF608Q9ULD9 1512 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC12-208ENST00000437733 TTLL13PA6NNM8 815 aa9.86□□□□□ -0.83
TRAPPC12-208ENST00000437733 IFNL1Q8IU54 200 aa9.86□□□□□ -0.83
TRAPPC12-208ENST00000437733 VPS8Q8N3P4 1428 aa9.85□□□□□ -0.83
TRAPPC12-208ENST00000437733 POTEJP0CG39 1038 aa9.85□□□□□ -0.83
TRAPPC12-208ENST00000437733 TPRNQ4KMQ1 711 aa9.85□□□□□ -0.83
TRAPPC12-208ENST00000437733 FHAD1B1AJZ9 1412 aa9.84□□□□□ -0.83
TRAPPC12-208ENST00000437733 TRIM26Q12899 539 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC12-208ENST00000437733 ARAP1Q96P48 1450 aa9.84□□□□□ -0.83
TRAPPC12-208ENST00000437733 POTEFA5A3E0 1075 aa9.83□□□□□ -0.84
TRAPPC12-208ENST00000437733 VSIG10Q8N0Z9 540 aa9.83□□□□□ -0.84
TRAPPC12-208ENST00000437733 PCGF6Q9BYE7 350 aa9.82□□□□□ -0.84
TRAPPC12-208ENST00000437733 ARHGAP35Q9NRY4 1499 aa9.82□□□□□ -0.84
TRAPPC12-208ENST00000437733 SNAPC4Q5SXM2 1469 aa9.81□□□□□ -0.84
TRAPPC12-208ENST00000437733 DCAF8Q5TAQ9 597 aa9.81□□□□□ -0.84
TRAPPC12-208ENST00000437733 TIMELESSQ9UNS1 1208 aa9.8□□□□□ -0.84
TRAPPC12-208ENST00000437733 EFCAB5A4FU69 1503 aa9.8□□□□□ -0.84
TRAPPC12-208ENST00000437733 MAGI1Q96QZ7 1491 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC12-208ENST00000437733 PPARGC1BQ86YN6 1023 aaKnown RBP9.79□□□□□ -0.84
TRAPPC12-208ENST00000437733 KLHL34Q8N239 644 aa9.79□□□□□ -0.84
TRAPPC12-208ENST00000437733 TRIM35Q9UPQ4 493 aa9.79□□□□□ -0.84
TRAPPC12-208ENST00000437733 PYGBP11216 843 aa9.78□□□□□ -0.84
TRAPPC12-208ENST00000437733 IER5LQ5T953 404 aa9.78□□□□□ -0.84
TRAPPC12-208ENST00000437733 COLQQ9Y215 455 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC12-208ENST00000437733 IQGAP2Q13576 1575 aa9.76□□□□□ -0.85
TRAPPC12-208ENST00000437733 MAMSTRQ6ZN01 415 aa9.76□□□□□ -0.85
TRAPPC12-208ENST00000437733 TMEM106CQ9BVX2 250 aa9.76□□□□□ -0.85
TRAPPC12-208ENST00000437733 SAMD9Q5K651 1589 aa9.75□□□□□ -0.85
TRAPPC12-208ENST00000437733 SYNJ2O15056 1496 aa9.75□□□□□ -0.85
TRAPPC12-208ENST00000437733 GRIN2AQ12879 1464 aa9.75□□□□□ -0.85
TRAPPC12-208ENST00000437733 GSE1Q14687 1217 aa9.75□□□□□ -0.85
TRAPPC12-208ENST00000437733 IFNLR1Q8IU57 520 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC12-208ENST00000437733 FHOD3Q2V2M9 1422 aa9.73□□□□□ -0.85
TRAPPC12-208ENST00000437733 P3H3Q8IVL6 736 aa9.72□□□□□ -0.85
TRAPPC12-208ENST00000437733 CHMP7Q8WUX9 453 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-208ENST00000437733 PCDHB8Q9UN66 801 aa9.72□□□□□ -0.85
TRAPPC12-208ENST00000437733 TTBK1Q5TCY1 1321 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-208ENST00000437733 PCF11O94913 1555 aaKnown RBP9.71□□□□□ -0.85
TRAPPC12-208ENST00000437733 TULP1O00294 542 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC12-208ENST00000437733 CHRM1P11229 460 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC12-208ENST00000437733 KIAA0586Q9BVV6 1533 aa9.71□□□□□ -0.86
TRAPPC12-208ENST00000437733 SEC24BO95487 1268 aa9.7□□□□□ -0.86
TRAPPC12-208ENST00000437733 ERICH6Q7L0X2 663 aa9.7□□□□□ -0.86
TRAPPC12-208ENST00000437733 SCUBE2Q9NQ36 999 aa9.7□□□□□ -0.86
TRAPPC12-208ENST00000437733 FMN1Q68DA7 1419 aa9.7□□□□□ -0.86
TRAPPC12-208ENST00000437733 UGGT2Q9NYU1 1516 aa9.7□□□□□ -0.86
TRAPPC12-208ENST00000437733 CEP170Q5SW79 1584 aa9.7□□□□□ -0.86
TRAPPC12-208ENST00000437733 CHD1O14646 1710 aa9.69□□□□□ -0.86
TRAPPC12-208ENST00000437733 CFAP43Q8NDM7 1665 aa9.69□□□□□ -0.86
TRAPPC12-208ENST00000437733 SPOCK2Q92563 424 aa9.69□□□□□ -0.86
TRAPPC12-208ENST00000437733 FYCO1Q9BQS8 1478 aa9.69□□□□□ -0.86
TRAPPC12-208ENST00000437733 TIAM1Q13009 1591 aa9.68□□□□□ -0.86
TRAPPC12-208ENST00000437733 MAP3K1Q13233 1512 aa9.68□□□□□ -0.86
TRAPPC12-208ENST00000437733 CASKIN1Q8WXD9 1431 aa9.67□□□□□ -0.86
TRAPPC12-208ENST00000437733 IRX5P78411 483 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC12-208ENST00000437733 ZNF467Q7Z7K2 595 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC12-208ENST00000437733 NUP160Q12769 1436 aa9.66□□□□□ -0.86
TRAPPC12-208ENST00000437733 KIAA0556O60303 1618 aa9.66□□□□□ -0.86
TRAPPC12-208ENST00000437733 ATP1B4Q9UN42 357 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC12-208ENST00000437733 PLCG2P16885 1265 aa9.63□□□□□ -0.87
TRAPPC12-208ENST00000437733 KANK4Q5T7N3 995 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC12-208ENST00000437733 HECW1Q76N89 1606 aa9.63□□□□□ -0.87
TRAPPC12-208ENST00000437733 LRRIQ1Q96JM4 1722 aa9.62□□□□□ -0.87
TRAPPC12-208ENST00000437733 DISP1Q96F81 1524 aa9.62□□□□□ -0.87
TRAPPC12-208ENST00000437733 HOMEZQ8IX15 550 aa9.62□□□□□ -0.87
TRAPPC12-208ENST00000437733 GTF3C3Q9Y5Q9 886 aa9.62□□□□□ -0.87
TRAPPC12-208ENST00000437733 LRRC9Q6ZRR7 1453 aa9.61□□□□□ -0.87
TRAPPC12-208ENST00000437733 LCE2DQ5TA82 110 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC12-208ENST00000437733 CARMIL2Q6F5E8 1435 aa9.61□□□□□ -0.87
TRAPPC12-208ENST00000437733 OCEL1Q9H607 264 aa9.6□□□□□ -0.87
TRAPPC12-208ENST00000437733 CCDC18Q5T9S5 1454 aa9.59□□□□□ -0.87
TRAPPC12-208ENST00000437733 CIZ1Q9ULV3 898 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC12-208ENST00000437733 RAPGEF6Q8TEU7 1601 aa9.58□□□□□ -0.88
TRAPPC12-208ENST00000437733 POTEMA6NI47 508 aa9.58□□□□□ -0.88
TRAPPC12-208ENST00000437733 PSEN1P49768 467 aa9.58□□□□□ -0.88
TRAPPC12-208ENST00000437733 JPH4Q96JJ6 628 aa9.58□□□□□ -0.88
TRAPPC12-208ENST00000437733 KDM2AQ9Y2K7 1162 aa9.57□□□□□ -0.88
TRAPPC12-208ENST00000437733 SHROOM2Q13796 1616 aa9.56□□□□□ -0.88
TRAPPC12-208ENST00000437733 HRCP23327 699 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms