RNA–Protein interactions for RNA: ENST00000426635.6

LINC00472-203, long intergenic non-protein coding RNA 472, humanhuman

TSL 2 BASIC

Gene LINC00472, Length 2,958 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-203ENST00000426635 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
LINC00472-203ENST00000426635 RCAN3Q9UKA8 241 aa22.4■■□□□ 1.18
LINC00472-203ENST00000426635 HFM1A2PYH4 1435 aa22.39■■□□□ 1.18
LINC00472-203ENST00000426635 PTPN23Q9H3S7 1636 aa22.39■■□□□ 1.17
LINC00472-203ENST00000426635 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.37■■□□□ 1.17
LINC00472-203ENST00000426635 CFAP43Q8NDM7 1665 aa22.36■■□□□ 1.17
LINC00472-203ENST00000426635 TMC1Q8TDI8 760 aa22.36■■□□□ 1.17
LINC00472-203ENST00000426635 PNISRQ8TF01 805 aaKnown RBP22.36■■□□□ 1.17
LINC00472-203ENST00000426635 POGKQ9P215 609 aa22.35■■□□□ 1.17
LINC00472-203ENST00000426635 HSP90AA1P07900 732 aaKnown RBP22.34■■□□□ 1.17
LINC00472-203ENST00000426635 NAIPQ13075 1403 aa22.34■■□□□ 1.17
LINC00472-203ENST00000426635 FGD6Q6ZV73 1430 aa22.33■■□□□ 1.17
LINC00472-203ENST00000426635 PCF11O94913 1555 aaKnown RBP22.33■■□□□ 1.16
LINC00472-203ENST00000426635 ARXQ96QS3 562 aa22.32■■□□□ 1.16
LINC00472-203ENST00000426635 PLIN1O60240 522 aa22.32■■□□□ 1.16
LINC00472-203ENST00000426635 RRP9O43818 475 aaKnown RBP22.31■■□□□ 1.16
LINC00472-203ENST00000426635 NBPF8Q3BBV2 869 aa22.31■■□□□ 1.16
LINC00472-203ENST00000426635 FMN1Q68DA7 1419 aa22.31■■□□□ 1.16
LINC00472-203ENST00000426635 PNNQ9H307 717 aaKnown RBP22.3■■□□□ 1.16
LINC00472-203ENST00000426635 DHX29Q7Z478 1369 aaKnown RBP22.29■■□□□ 1.16
LINC00472-203ENST00000426635 FOXD1Q16676 465 aa22.29■■□□□ 1.16
LINC00472-203ENST00000426635 RRP7BPQ9NSQ0 103 aa22.29■■□□□ 1.16
LINC00472-203ENST00000426635 PABPN1Q86U42 306 aaKnown RBP eCLIP22.26■■□□□ 1.15
LINC00472-203ENST00000426635 CRBNQ96SW2 442 aa22.25■■□□□ 1.15
LINC00472-203ENST00000426635 CHIC2Q9UKJ5 165 aa22.23■■□□□ 1.15
LINC00472-203ENST00000426635 CUX1P39880 1505 aa22.23■■□□□ 1.15
LINC00472-203ENST00000426635 ABCA5Q8WWZ7 1642 aa22.23■■□□□ 1.15
LINC00472-203ENST00000426635 L1TD1Q5T7N2 865 aaKnown RBP22.22■■□□□ 1.15
LINC00472-203ENST00000426635 FAM161AQ3B820 660 aa22.2■■□□□ 1.15
LINC00472-203ENST00000426635 DENND4BO75064 1496 aaPredicted RBP22.2■■□□□ 1.14
LINC00472-203ENST00000426635 SPATA31E1Q6ZUB1 1445 aa22.19■■□□□ 1.14
LINC00472-203ENST00000426635 C8orf34Q49A92 452 aa22.19■■□□□ 1.14
LINC00472-203ENST00000426635 CDCA7LQ96GN5 454 aa22.18■■□□□ 1.14
LINC00472-203ENST00000426635 POLR1AO95602 1720 aaPredicted RBP22.18■■□□□ 1.14
LINC00472-203ENST00000426635 FHOD3Q2V2M9 1422 aa22.18■■□□□ 1.14
LINC00472-203ENST00000426635 MPHOSPH9Q99550 1183 aa22.17■■□□□ 1.14
LINC00472-203ENST00000426635 ATAD2BQ9ULI0 1458 aa22.16■■□□□ 1.14
LINC00472-203ENST00000426635 CLCN1P35523 988 aa22.16■■□□□ 1.14
LINC00472-203ENST00000426635 ARID4BQ4LE39 1312 aaPredicted RBP22.15■■□□□ 1.14
LINC00472-203ENST00000426635 IGF1RP08069 1367 aa22.15■■□□□ 1.14
LINC00472-203ENST00000426635 LRPPRCP42704 1394 aaKnown RBP22.13■■□□□ 1.13
LINC00472-203ENST00000426635 MTUS2Q5JR59 1369 aa22.13■■□□□ 1.13
LINC00472-203ENST00000426635 RGS3P49796 1198 aa22.13■■□□□ 1.13
LINC00472-203ENST00000426635 SLKQ9H2G2 1235 aaPredicted RBP22.12■■□□□ 1.13
LINC00472-203ENST00000426635 XRCC6P12956 609 aaKnown RBP eCLIP22.12■■□□□ 1.13
LINC00472-203ENST00000426635 CARMIL1Q5VZK9 1371 aa22.12■■□□□ 1.13
LINC00472-203ENST00000426635 KTN1Q86UP2 1357 aaKnown RBP22.11■■□□□ 1.13
LINC00472-203ENST00000426635 C20orf194Q5TEA3 1177 aa22.11■■□□□ 1.13
LINC00472-203ENST00000426635 PANK2Q9BZ23 570 aa22.11■■□□□ 1.13
LINC00472-203ENST00000426635 DNAJC5BQ9UF47 199 aa22.11■■□□□ 1.13
LINC00472-203ENST00000426635 FYCO1Q9BQS8 1478 aa22.09■■□□□ 1.13
LINC00472-203ENST00000426635 KDM2BQ8NHM5 1336 aa22.08■■□□□ 1.13
LINC00472-203ENST00000426635 HECW1Q76N89 1606 aa22.07■■□□□ 1.12
LINC00472-203ENST00000426635 ZNF326Q5BKZ1 582 aaKnown RBP22.07■■□□□ 1.12
LINC00472-203ENST00000426635 PDE3BQ13370 1112 aa22.07■■□□□ 1.12
LINC00472-203ENST00000426635 GOLGA6L3A6NEY3 463 aa22.06■■□□□ 1.12
LINC00472-203ENST00000426635 CASKIN1Q8WXD9 1431 aa22.06■■□□□ 1.12
LINC00472-203ENST00000426635 A0A0U1RQG5 324 aaPredicted RBP22.06■■□□□ 1.12
LINC00472-203ENST00000426635 CENPQQ7L2Z9 268 aaPredicted RBP22.05■■□□□ 1.12
LINC00472-203ENST00000426635 GZF1Q9H116 711 aaPredicted RBP22.05■■□□□ 1.12
LINC00472-203ENST00000426635 BCORL1Q5H9F3 1711 aa22.03■■□□□ 1.12
LINC00472-203ENST00000426635 KDM6BO15054 1643 aa22.03■■□□□ 1.12
LINC00472-203ENST00000426635 BRD4O60885 1362 aaPredicted RBP22.02■■□□□ 1.12
LINC00472-203ENST00000426635 MYBBP1AQ9BQG0 1328 aaKnown RBP22.02■■□□□ 1.12
LINC00472-203ENST00000426635 MYOM3Q5VTT5 1437 aa22.01■■□□□ 1.11
LINC00472-203ENST00000426635 USP47Q96K76 1375 aa22.01■■□□□ 1.11
LINC00472-203ENST00000426635 TEX14Q8IWB6 1497 aa22.01■■□□□ 1.11
LINC00472-203ENST00000426635 MIA2Q96PC5 1412 aa22■■□□□ 1.11
LINC00472-203ENST00000426635 RPRD2Q5VT52 1461 aaKnown RBP21.99■■□□□ 1.11
LINC00472-203ENST00000426635 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
LINC00472-203ENST00000426635 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
LINC00472-203ENST00000426635 RBM10P98175 930 aaKnown RBP21.98■■□□□ 1.11
LINC00472-203ENST00000426635 ANKRD30BQ9BXX2 1392 aa21.96■■□□□ 1.11
LINC00472-203ENST00000426635 BECN1Q14457 450 aa21.96■■□□□ 1.11
LINC00472-203ENST00000426635 FSD2A1L4K1 749 aa21.95■■□□□ 1.1
LINC00472-203ENST00000426635 RALBP1Q15311 655 aa21.94■■□□□ 1.1
LINC00472-203ENST00000426635 USP19O94966 1318 aa21.93■■□□□ 1.1
LINC00472-203ENST00000426635 ESPNB1AK53 854 aa21.93■■□□□ 1.1
LINC00472-203ENST00000426635 PDCL3Q9H2J4 239 aa21.93■■□□□ 1.1
LINC00472-203ENST00000426635 GCC2Q8IWJ2 1684 aa21.92■■□□□ 1.1
LINC00472-203ENST00000426635 ERBB4Q15303 1308 aa21.92■■□□□ 1.1
LINC00472-203ENST00000426635 CFTRP13569 1480 aa21.91■■□□□ 1.1
LINC00472-203ENST00000426635 SEC24BO95487 1268 aa21.91■■□□□ 1.1
LINC00472-203ENST00000426635 ROCK2O75116 1388 aaKnown RBP21.89■■□□□ 1.09
LINC00472-203ENST00000426635 ANTXR1Q9H6X2 564 aa21.89■■□□□ 1.09
LINC00472-203ENST00000426635 SLC4A1APQ9BWU0 796 aaKnown RBP21.88■■□□□ 1.09
LINC00472-203ENST00000426635 MYH16Q9H6N6 1097 aa21.88■■□□□ 1.09
LINC00472-203ENST00000426635 NLRP13Q86W25 1043 aa21.88■■□□□ 1.09
LINC00472-203ENST00000426635 SPRYD3Q8NCJ5 442 aa21.88■■□□□ 1.09
LINC00472-203ENST00000426635 PRDM4Q9UKN5 801 aa21.87■■□□□ 1.09
LINC00472-203ENST00000426635 TPM2P07951 284 aa21.86■■□□□ 1.09
LINC00472-203ENST00000426635 CALD1Q05682 793 aaKnown RBP21.86■■□□□ 1.09
LINC00472-203ENST00000426635 MRE11P49959 708 aa21.85■■□□□ 1.09
LINC00472-203ENST00000426635 MCM4P33991 863 aa21.83■■□□□ 1.09
LINC00472-203ENST00000426635 AAMPQ13685 434 aa21.83■■□□□ 1.09
LINC00472-203ENST00000426635 TRIM44Q96DX7 344 aaPredicted RBP21.83■■□□□ 1.08
LINC00472-203ENST00000426635 CENPJQ9HC77 1338 aaPredicted RBP21.82■■□□□ 1.08
LINC00472-203ENST00000426635 SUPT6HQ7KZ85 1726 aaKnown RBP21.82■■□□□ 1.08
LINC00472-203ENST00000426635 GRPEL1Q9HAV7 217 aa21.81■■□□□ 1.08
LINC00472-203ENST00000426635 SNAPC4Q5SXM2 1469 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms