RNA–Protein interactions for RNA: ENST00000398532.8

MSL1-202, Transcript of male specific lethal 1 homolog, humanhuman

TSL 1 (best) BASIC

Gene MSL1, Length 4,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-202ENST00000398532 FGD5Q6ZNL6 1462 aa23.71■■□□□ 1.39
MSL1-202ENST00000398532 EFCAB2Q5VUJ9 269 aa23.7■■□□□ 1.38
MSL1-202ENST00000398532 GGT6Q6P531 493 aa23.7■■□□□ 1.38
MSL1-202ENST00000398532 SAFB2Q14151 953 aaKnown RBP eCLIP23.68■■□□□ 1.38
MSL1-202ENST00000398532 ARID4BQ4LE39 1312 aaPredicted RBP23.67■■□□□ 1.38
MSL1-202ENST00000398532 ERICH6BQ5W0A0 696 aa23.67■■□□□ 1.38
MSL1-202ENST00000398532 ZBTB7CA1YPR0 619 aa23.67■■□□□ 1.38
MSL1-202ENST00000398532 RALBP1Q15311 655 aa23.67■■□□□ 1.38
MSL1-202ENST00000398532 RCAN3Q9UKA8 241 aa23.65■■□□□ 1.38
MSL1-202ENST00000398532 RAD54L2Q9Y4B4 1467 aa23.64■■□□□ 1.38
MSL1-202ENST00000398532 MORC1Q86VD1 984 aa23.64■■□□□ 1.38
MSL1-202ENST00000398532 PHLDB1Q86UU1 1377 aa23.64■■□□□ 1.37
MSL1-202ENST00000398532 NCAPD3P42695 1498 aa23.61■■□□□ 1.37
MSL1-202ENST00000398532 SRPK2P78362 688 aaKnown RBP23.61■■□□□ 1.37
MSL1-202ENST00000398532 ST20-MTHFSA0A0A6YYL1 179 aa23.6■■□□□ 1.37
MSL1-202ENST00000398532 PRKRIP1Q9H875 184 aaPredicted RBP23.59■■□□□ 1.37
MSL1-202ENST00000398532 ARAP1Q96P48 1450 aa23.57■■□□□ 1.36
MSL1-202ENST00000398532 SYNJ1O43426 1573 aa23.57■■□□□ 1.36
MSL1-202ENST00000398532 KIF3BO15066 747 aa23.57■■□□□ 1.36
MSL1-202ENST00000398532 NLRP13Q86W25 1043 aa23.57■■□□□ 1.36
MSL1-202ENST00000398532 RSPH4AQ5TD94 716 aa23.56■■□□□ 1.36
MSL1-202ENST00000398532 STK26Q9P289 416 aa23.55■■□□□ 1.36
MSL1-202ENST00000398532 FGD6Q6ZV73 1430 aa23.54■■□□□ 1.36
MSL1-202ENST00000398532 MLECQ14165 292 aa23.53■■□□□ 1.36
MSL1-202ENST00000398532 GAPVD1Q14C86 1478 aa23.53■■□□□ 1.36
MSL1-202ENST00000398532 LRRC9Q6ZRR7 1453 aa23.52■■□□□ 1.36
MSL1-202ENST00000398532 ZNF644Q9H582 1327 aaPredicted RBP23.5■■□□□ 1.35
MSL1-202ENST00000398532 MS4A1P11836 297 aa23.5■■□□□ 1.35
MSL1-202ENST00000398532 SPAG9O60271 1321 aaKnown RBP23.49■■□□□ 1.35
MSL1-202ENST00000398532 MYOM3Q5VTT5 1437 aa23.46■■□□□ 1.35
MSL1-202ENST00000398532 U2AF1L5P0DN76 240 aaPredicted RBP23.46■■□□□ 1.35
MSL1-202ENST00000398532 U2AF1Q01081 240 aaKnown RBP eCLIP23.46■■□□□ 1.353e-6■□□□□ 8.2
MSL1-202ENST00000398532 GOLGA6L22H0YM25 854 aa23.44■■□□□ 1.34
MSL1-202ENST00000398532 SOX12O15370 315 aa23.44■■□□□ 1.34
MSL1-202ENST00000398532 PNNQ9H307 717 aaKnown RBP23.44■■□□□ 1.34
MSL1-202ENST00000398532 USP47Q96K76 1375 aa23.44■■□□□ 1.34
MSL1-202ENST00000398532 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
MSL1-202ENST00000398532 UACAQ9BZF9 1416 aa23.42■■□□□ 1.34
MSL1-202ENST00000398532 PRXQ9BXM0 1461 aa23.42■■□□□ 1.34
MSL1-202ENST00000398532 CCDC144AA2RUR9 1427 aa23.41■■□□□ 1.34
MSL1-202ENST00000398532 KIF15Q9NS87 1388 aa23.41■■□□□ 1.34
MSL1-202ENST00000398532 TCERG1O14776 1098 aaKnown RBP23.41■■□□□ 1.34
MSL1-202ENST00000398532 RRBP1Q9P2E9 1410 aaKnown RBP23.41■■□□□ 1.34
MSL1-202ENST00000398532 PANK3Q9H999 370 aa23.41■■□□□ 1.34
MSL1-202ENST00000398532 CFTRP13569 1480 aa23.4■■□□□ 1.34
MSL1-202ENST00000398532 GOLGA2Q08379 1002 aa23.4■■□□□ 1.34
MSL1-202ENST00000398532 CCDC146Q8IYE0 955 aa23.4■■□□□ 1.34
MSL1-202ENST00000398532 MYBBP1AQ9BQG0 1328 aaKnown RBP23.4■■□□□ 1.34
MSL1-202ENST00000398532 PDE3BQ13370 1112 aa23.39■■□□□ 1.34
MSL1-202ENST00000398532 NCLP19338 710 aaKnown RBP23.39■■□□□ 1.33
MSL1-202ENST00000398532 PTPRGP23470 1445 aa23.39■■□□□ 1.33
MSL1-202ENST00000398532 CHMP4BQ9H444 224 aaKnown RBP23.38■■□□□ 1.33
MSL1-202ENST00000398532 LMOD2Q6P5Q4 547 aa23.37■■□□□ 1.33
MSL1-202ENST00000398532 ZBED9Q6R2W3 1325 aa23.37■■□□□ 1.33
MSL1-202ENST00000398532 CASKIN1Q8WXD9 1431 aa23.37■■□□□ 1.33
MSL1-202ENST00000398532 CASC1Q6TDU7 716 aa23.36■■□□□ 1.33
MSL1-202ENST00000398532 TRIM44Q96DX7 344 aaPredicted RBP23.36■■□□□ 1.33
MSL1-202ENST00000398532 NUTM2DQ5VT03 806 aaPredicted RBP23.36■■□□□ 1.33
MSL1-202ENST00000398532 DEKP35659 375 aaKnown RBP23.35■■□□□ 1.33
MSL1-202ENST00000398532 RTN4Q9NQC3 1192 aaKnown RBP23.35■■□□□ 1.33
MSL1-202ENST00000398532 A0A0G2JS52 829 aa23.35■■□□□ 1.33
MSL1-202ENST00000398532 HDGFL2Q7Z4V5 671 aaPredicted RBP23.34■■□□□ 1.33
MSL1-202ENST00000398532 AQRO60306 1485 aaKnown RBP eCLIP23.34■■□□□ 1.332e-7■■■■□ 25.6
MSL1-202ENST00000398532 EIF3AQ14152 1382 aaKnown RBP23.34■■□□□ 1.33
MSL1-202ENST00000398532 NCOA2Q15596 1464 aa23.33■■□□□ 1.33
MSL1-202ENST00000398532 TRAK1Q9UPV9 953 aa23.32■■□□□ 1.32
MSL1-202ENST00000398532 KIF7Q2M1P5 1343 aa23.31■■□□□ 1.32
MSL1-202ENST00000398532 CCDC7Q96M83 1385 aa23.3■■□□□ 1.32
MSL1-202ENST00000398532 WASHC2CQ9Y4E1 1318 aa23.3■■□□□ 1.32
MSL1-202ENST00000398532 HSP90AB1P08238 724 aaKnown RBP23.29■■□□□ 1.32
MSL1-202ENST00000398532 HDGFP51858 240 aaKnown RBP23.29■■□□□ 1.32
MSL1-202ENST00000398532 CLUAP1Q96AJ1 413 aa23.29■■□□□ 1.32
MSL1-202ENST00000398532 WASHC2AQ641Q2 1341 aa23.29■■□□□ 1.32
MSL1-202ENST00000398532 SPRYD3Q8NCJ5 442 aa23.28■■□□□ 1.32
MSL1-202ENST00000398532 CUX1P39880 1505 aa23.28■■□□□ 1.32
MSL1-202ENST00000398532 TOP2BQ02880 1626 aa23.27■■□□□ 1.32
MSL1-202ENST00000398532 PLIN1O60240 522 aa23.27■■□□□ 1.32
MSL1-202ENST00000398532 IPO8O15397 1037 aaKnown RBP23.26■■□□□ 1.31
MSL1-202ENST00000398532 TPRNQ4KMQ1 711 aa23.25■■□□□ 1.31
MSL1-202ENST00000398532 IPO9Q96P70 1041 aaKnown RBP23.25■■□□□ 1.31
MSL1-202ENST00000398532 ITPRIPQ8IWB1 547 aa23.24■■□□□ 1.31
MSL1-202ENST00000398532 EXOC6Q8TAG9 804 aa23.24■■□□□ 1.31
MSL1-202ENST00000398532 RWDD1Q9H446 243 aaPredicted RBP23.23■■□□□ 1.31
MSL1-202ENST00000398532 HSCBQ8IWL3 235 aa23.23■■□□□ 1.31
MSL1-202ENST00000398532 FYCO1Q9BQS8 1478 aa23.23■■□□□ 1.31
MSL1-202ENST00000398532 RRP7AQ9Y3A4 280 aaKnown RBP23.22■■□□□ 1.31
MSL1-202ENST00000398532 NESP48681 1621 aa23.21■■□□□ 1.31
MSL1-202ENST00000398532 CENPJQ9HC77 1338 aaPredicted RBP23.21■■□□□ 1.31
MSL1-202ENST00000398532 RRP1P56182 461 aaKnown RBP23.2■■□□□ 1.3
MSL1-202ENST00000398532 SMC4Q9NTJ3 1288 aa23.2■■□□□ 1.3
MSL1-202ENST00000398532 TERF2IPQ9NYB0 399 aa23.2■■□□□ 1.3
MSL1-202ENST00000398532 APBB1O00213 710 aa23.2■■□□□ 1.3
MSL1-202ENST00000398532 HAP1P54257 671 aaPredicted RBP23.2■■□□□ 1.3
MSL1-202ENST00000398532 SLKQ9H2G2 1235 aaPredicted RBP23.19■■□□□ 1.3
MSL1-202ENST00000398532 ANKRD50Q9ULJ7 1429 aa23.19■■□□□ 1.3
MSL1-202ENST00000398532 OS9Q13438 667 aaPredicted RBP23.17■■□□□ 1.3
MSL1-202ENST00000398532 CNTLNQ9NXG0 1405 aa23.17■■□□□ 1.3
MSL1-202ENST00000398532 RTF1Q92541 710 aaKnown RBP23.16■■□□□ 1.3
MSL1-202ENST00000398532 APAF1O14727 1248 aa23.14■■□□□ 1.3
MSL1-202ENST00000398532 PMFBP1Q8TBY8 1022 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms