RNA–Protein interactions for RNA: ENST00000398532.8

MSL1-202, Transcript of male specific lethal 1 homolog, humanhuman

TSL 1 (best) BASIC

Gene MSL1, Length 4,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-202ENST00000398532 NISCHQ9Y2I1 1504 aa32.21■■■□□ 2.75
MSL1-202ENST00000398532 DCAF8L2P0C7V8 631 aa31.93■■■□□ 2.7
MSL1-202ENST00000398532 SUPT5HO00267 1087 aaKnown RBP30.86■■■□□ 2.53
MSL1-202ENST00000398532 SHROOM4Q9ULL8 1493 aa30.56■■■□□ 2.48
MSL1-202ENST00000398532 EHMT2Q96KQ7 1210 aa29.48■■■□□ 2.31
MSL1-202ENST00000398532 FAM9AQ8IZU1 332 aaPredicted RBP28.98■■■□□ 2.23
MSL1-202ENST00000398532 PCGF6Q9BYE7 350 aa28.91■■■□□ 2.22
MSL1-202ENST00000398532 TRIM41Q8WV44 630 aa28.53■■■□□ 2.16
MSL1-202ENST00000398532 TTBK1Q5TCY1 1321 aaPredicted RBP28.48■■■□□ 2.15
MSL1-202ENST00000398532 APLP2Q06481 763 aa28.46■■■□□ 2.15
MSL1-202ENST00000398532 RANGAP1P46060 587 aaPredicted RBP28.09■■■□□ 2.09
MSL1-202ENST00000398532 CHIC1Q5VXU3 224 aa28.03■■■□□ 2.08
MSL1-202ENST00000398532 ZEB1P37275 1124 aaPredicted RBP28.01■■■□□ 2.07
MSL1-202ENST00000398532 CCER1Q8TC90 406 aaPredicted RBP27.98■■■□□ 2.07
MSL1-202ENST00000398532 UBTFP17480 764 aaKnown RBP27.94■■■□□ 2.06
MSL1-202ENST00000398532 LOC105371045A0A1W2PR82 267 aa27.89■■■□□ 2.05
MSL1-202ENST00000398532 PPARGC1BQ86YN6 1023 aaKnown RBP27.85■■■□□ 2.05
MSL1-202ENST00000398532 PELP1Q8IZL8 1130 aaKnown RBP27.76■■■□□ 2.03
MSL1-202ENST00000398532 TRIM26Q12899 539 aaPredicted RBP27.74■■■□□ 2.03
MSL1-202ENST00000398532 HRCP23327 699 aa27.7■■■□□ 2.02
MSL1-202ENST00000398532 CENPBP07199 599 aaPredicted RBP27.59■■■□□ 2.01
MSL1-202ENST00000398532 ATP1B4Q9UN42 357 aaPredicted RBP27.57■■■□□ 2
MSL1-202ENST00000398532 YTHDC1Q96MU7 727 aaKnown RBP27.24■■□□□ 1.95
MSL1-202ENST00000398532 ABCC9O60706 1549 aa27.15■■□□□ 1.94
MSL1-202ENST00000398532 HNRNPUL2Q1KMD3 747 aaKnown RBP27.06■■□□□ 1.92
MSL1-202ENST00000398532 ITGAEP38570 1179 aa27.01■■□□□ 1.91
MSL1-202ENST00000398532 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.98■■□□□ 1.91
MSL1-202ENST00000398532 PABPN1Q86U42 306 aaKnown RBP eCLIP26.94■■□□□ 1.9
MSL1-202ENST00000398532 ZCCHC6Q5VYS8 1495 aaKnown RBP26.78■■□□□ 1.88
MSL1-202ENST00000398532 NEFLP07196 543 aa26.73■■□□□ 1.87
MSL1-202ENST00000398532 DIEXFQ68CQ4 756 aaKnown RBP26.61■■□□□ 1.85
MSL1-202ENST00000398532 ERICH6Q7L0X2 663 aa26.6■■□□□ 1.85
MSL1-202ENST00000398532 CSRNP3Q8WYN3 585 aa26.38■■□□□ 1.81
MSL1-202ENST00000398532 SCRIBQ14160 1630 aa26.36■■□□□ 1.81
MSL1-202ENST00000398532 FAM50AQ14320 339 aaKnown RBP26.34■■□□□ 1.81
MSL1-202ENST00000398532 POLR3GLQ9BT43 218 aa26.33■■□□□ 1.81
MSL1-202ENST00000398532 CCDC180Q9P1Z9 1646 aa26.26■■□□□ 1.79
MSL1-202ENST00000398532 CNGB1Q14028 1251 aaPredicted RBP26.23■■□□□ 1.79
MSL1-202ENST00000398532 DCAF1Q9Y4B6 1507 aa26.18■■□□□ 1.78
MSL1-202ENST00000398532 NEUROD1Q13562 356 aa26.15■■□□□ 1.78
MSL1-202ENST00000398532 MYO15BQ96JP2 1530 aa26.09■■□□□ 1.77
MSL1-202ENST00000398532 ZNF316A6NFI3 1004 aaPredicted RBP26.09■■□□□ 1.77
MSL1-202ENST00000398532 MYT1LQ9UL68 1186 aa26.07■■□□□ 1.76
MSL1-202ENST00000398532 GTF3C3Q9Y5Q9 886 aa26.07■■□□□ 1.76
MSL1-202ENST00000398532 MYT1Q01538 1121 aa26.04■■□□□ 1.76
MSL1-202ENST00000398532 TRIM52Q96A61 297 aa26.01■■□□□ 1.75
MSL1-202ENST00000398532 P3H3Q8IVL6 736 aa25.99■■□□□ 1.75
MSL1-202ENST00000398532 RSF1Q96T23 1441 aaPredicted RBP25.91■■□□□ 1.74
MSL1-202ENST00000398532 ACIN1Q9UKV3 1341 aaKnown RBP25.83■■□□□ 1.73
MSL1-202ENST00000398532 BCANQ96GW7 911 aa25.75■■□□□ 1.71
MSL1-202ENST00000398532 ANP32CO43423 234 aa25.74■■□□□ 1.71
MSL1-202ENST00000398532 ARID3CA6NKF2 412 aa25.73■■□□□ 1.71
MSL1-202ENST00000398532 FBLN2P98095 1184 aa25.71■■□□□ 1.71
MSL1-202ENST00000398532 ZNF326Q5BKZ1 582 aaKnown RBP25.69■■□□□ 1.7
MSL1-202ENST00000398532 DAXXQ9UER7 740 aaPredicted RBP25.57■■□□□ 1.68
MSL1-202ENST00000398532 SLC4A1APQ9BWU0 796 aaKnown RBP25.55■■□□□ 1.68
MSL1-202ENST00000398532 CLIP1P30622 1438 aa25.49■■□□□ 1.67
MSL1-202ENST00000398532 RB1CC1Q8TDY2 1594 aa25.47■■□□□ 1.67
MSL1-202ENST00000398532 CEP162Q5TB80 1403 aa25.44■■□□□ 1.66
MSL1-202ENST00000398532 ZNF777Q9ULD5 760 aaPredicted RBP25.42■■□□□ 1.66
MSL1-202ENST00000398532 NACADO15069 1562 aa25.41■■□□□ 1.66
MSL1-202ENST00000398532 CECR2Q9BXF3 1484 aa25.41■■□□□ 1.66
MSL1-202ENST00000398532 DDX10Q13206 875 aaKnown RBP25.38■■□□□ 1.65
MSL1-202ENST00000398532 EEA1Q15075 1411 aa25.36■■□□□ 1.65
MSL1-202ENST00000398532 TONSLQ96HA7 1378 aa25.35■■□□□ 1.65
MSL1-202ENST00000398532 WRNQ14191 1432 aaPredicted RBP eCLIP25.34■■□□□ 1.651e-6■□□□□ 8.5
MSL1-202ENST00000398532 CDK11AQ9UQ88 783 aaPredicted RBP25.32■■□□□ 1.64
MSL1-202ENST00000398532 GOLGA3Q08378 1498 aa25.31■■□□□ 1.64
MSL1-202ENST00000398532 MIER1Q8N108 512 aa25.3■■□□□ 1.64
MSL1-202ENST00000398532 CLSPNQ9HAW4 1339 aa25.28■■□□□ 1.64
MSL1-202ENST00000398532 CHIC2Q9UKJ5 165 aa25.27■■□□□ 1.64
MSL1-202ENST00000398532 SCAF1Q9H7N4 1312 aaKnown RBP25.26■■□□□ 1.64
MSL1-202ENST00000398532 TNIKQ9UKE5 1360 aa25.25■■□□□ 1.63
MSL1-202ENST00000398532 RTL5Q5HYW3 569 aaPredicted RBP25.2■■□□□ 1.62
MSL1-202ENST00000398532 FKBP8Q14318 412 aa25.18■■□□□ 1.62
MSL1-202ENST00000398532 BAZ1AQ9NRL2 1556 aaPredicted RBP25.17■■□□□ 1.62
MSL1-202ENST00000398532 MTUS2Q5JR59 1369 aa25.15■■□□□ 1.62
MSL1-202ENST00000398532 BAZ1BQ9UIG0 1483 aaKnown RBP25.14■■□□□ 1.62
MSL1-202ENST00000398532 HIRIP3Q9BW71 556 aaPredicted RBP25.14■■□□□ 1.61
MSL1-202ENST00000398532 HNRNPUQ00839 825 aaKnown RBP eCLIP25.13■■□□□ 1.61
MSL1-202ENST00000398532 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
MSL1-202ENST00000398532 SOGA1O94964 1423 aa25.07■■□□□ 1.6
MSL1-202ENST00000398532 MROH2BQ7Z745 1585 aa25.06■■□□□ 1.6
MSL1-202ENST00000398532 FAM9BQ8IZU0 186 aa25.04■■□□□ 1.6
MSL1-202ENST00000398532 KIF27Q86VH2 1401 aa25.01■■□□□ 1.59
MSL1-202ENST00000398532 RRP7BPQ9NSQ0 103 aa24.97■■□□□ 1.59
MSL1-202ENST00000398532 CCDC88BA6NC98 1476 aa24.87■■□□□ 1.57
MSL1-202ENST00000398532 TSPY4P0CV99 314 aa24.86■■□□□ 1.57
MSL1-202ENST00000398532 TSPY10P0CW01 314 aa24.86■■□□□ 1.57
MSL1-202ENST00000398532 ABCC8Q09428 1581 aa24.86■■□□□ 1.57
MSL1-202ENST00000398532 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
MSL1-202ENST00000398532 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.85■■□□□ 1.572e-7■■■□□ 14.6
MSL1-202ENST00000398532 SALL2Q9Y467 1007 aaPredicted RBP24.85■■□□□ 1.57
MSL1-202ENST00000398532 MRS2Q9HD23 443 aa24.85■■□□□ 1.57
MSL1-202ENST00000398532 CANXP27824 592 aaKnown RBP24.84■■□□□ 1.57
MSL1-202ENST00000398532 KDM2AQ9Y2K7 1162 aa24.84■■□□□ 1.57
MSL1-202ENST00000398532 EIF4G2P78344 907 aaKnown RBP eCLIP24.81■■□□□ 1.56
MSL1-202ENST00000398532 TMC1Q8TDI8 760 aa24.81■■□□□ 1.56
MSL1-202ENST00000398532 SIN3AQ96ST3 1273 aa24.79■■□□□ 1.56
MSL1-202ENST00000398532 CHGAP10645 457 aaKnown RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms