RNA–Protein interactions for RNA: ENST00000396535.7

SHC4-202, Transcript of SHC adaptor protein 4, humanhuman

TSL 1 (best) BASIC

Gene SHC4, Length 2,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-202ENST00000396535 GLIPR1L2Q4G1C9 344 aa9.48□□□□□ -0.89
SHC4-202ENST00000396535 NUDCQ9Y266 331 aa9.48□□□□□ -0.89
SHC4-202ENST00000396535 TCERG1O14776 1098 aaKnown RBP9.47□□□□□ -0.89
SHC4-202ENST00000396535 BACH2Q9BYV9 841 aa9.47□□□□□ -0.89
SHC4-202ENST00000396535 HSPA5P11021 654 aaKnown RBP9.46□□□□□ -0.89
SHC4-202ENST00000396535 LRRC9Q6ZRR7 1453 aa9.46□□□□□ -0.89
SHC4-202ENST00000396535 FAM50AQ14320 339 aaKnown RBP9.46□□□□□ -0.9
SHC4-202ENST00000396535 TOP2BQ02880 1626 aa9.46□□□□□ -0.9
SHC4-202ENST00000396535 VSIG10Q8N0Z9 540 aa9.46□□□□□ -0.9
SHC4-202ENST00000396535 MYCNP04198 464 aaPredicted RBP9.45□□□□□ -0.9
SHC4-202ENST00000396535 DCAF11Q8TEB1 546 aa9.45□□□□□ -0.9
SHC4-202ENST00000396535 CFAP44Q96MT7 982 aa9.45□□□□□ -0.9
SHC4-202ENST00000396535 MS4A1P11836 297 aa9.43□□□□□ -0.9
SHC4-202ENST00000396535 PLEKHG5O94827 1062 aa9.43□□□□□ -0.9
SHC4-202ENST00000396535 DDRGK1Q96HY6 314 aa9.42□□□□□ -0.9
SHC4-202ENST00000396535 PODXL2Q9NZ53 605 aa9.42□□□□□ -0.9
SHC4-202ENST00000396535 NCOA1Q15788 1441 aa9.42□□□□□ -0.9
SHC4-202ENST00000396535 BIVM-ERCC5R4GMW8 1640 aa9.41□□□□□ -0.9
SHC4-202ENST00000396535 CCDC7Q96M83 1385 aa9.41□□□□□ -0.9
SHC4-202ENST00000396535 UACAQ9BZF9 1416 aa9.41□□□□□ -0.9
SHC4-202ENST00000396535 PAXIP1Q6ZW49 1069 aaPredicted RBP9.41□□□□□ -0.9
SHC4-202ENST00000396535 CCDC18Q5T9S5 1454 aa9.4□□□□□ -0.9
SHC4-202ENST00000396535 RRAGDQ9NQL2 400 aaPredicted RBP9.4□□□□□ -0.9
SHC4-202ENST00000396535 EIF4G2P78344 907 aaKnown RBP eCLIP9.4□□□□□ -0.91
SHC4-202ENST00000396535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.39□□□□□ -0.91
SHC4-202ENST00000396535 CFAP43Q8NDM7 1665 aa9.39□□□□□ -0.91
SHC4-202ENST00000396535 EXOC6Q8TAG9 804 aa9.38□□□□□ -0.91
SHC4-202ENST00000396535 SLC4A3P48751 1232 aa9.38□□□□□ -0.91
SHC4-202ENST00000396535 LAMC3Q9Y6N6 1575 aa9.38□□□□□ -0.91
SHC4-202ENST00000396535 ABCA5Q8WWZ7 1642 aa9.37□□□□□ -0.91
SHC4-202ENST00000396535 FRAT2O75474 233 aaPredicted RBP9.37□□□□□ -0.91
SHC4-202ENST00000396535 CFTRP13569 1480 aa9.37□□□□□ -0.91
SHC4-202ENST00000396535 RRP1P56182 461 aaKnown RBP9.36□□□□□ -0.91
SHC4-202ENST00000396535 KIF21AQ7Z4S6 1674 aa9.36□□□□□ -0.91
SHC4-202ENST00000396535 AQRO60306 1485 aaKnown RBP eCLIP9.36□□□□□ -0.91
SHC4-202ENST00000396535 HFM1A2PYH4 1435 aa9.36□□□□□ -0.91
SHC4-202ENST00000396535 RRP9O43818 475 aaKnown RBP9.36□□□□□ -0.91
SHC4-202ENST00000396535 PTPN23Q9H3S7 1636 aa9.36□□□□□ -0.91
SHC4-202ENST00000396535 NESP48681 1621 aa9.35□□□□□ -0.91
SHC4-202ENST00000396535 HSP90AA2PQ14568 343 aaPredicted RBP9.35□□□□□ -0.91
SHC4-202ENST00000396535 POLR1AO95602 1720 aaPredicted RBP9.34□□□□□ -0.91
SHC4-202ENST00000396535 PTPRKQ15262 1439 aa9.33□□□□□ -0.92
SHC4-202ENST00000396535 KIF27Q86VH2 1401 aa9.33□□□□□ -0.92
SHC4-202ENST00000396535 VASPP50552 380 aaPredicted RBP9.33□□□□□ -0.92
SHC4-202ENST00000396535 KIF7Q2M1P5 1343 aa9.32□□□□□ -0.92
SHC4-202ENST00000396535 SENP3-EIF4A1A0A087X0R7 540 aa9.32□□□□□ -0.92
SHC4-202ENST00000396535 SKAP1Q86WV1 359 aa9.32□□□□□ -0.92
SHC4-202ENST00000396535 PCF11O94913 1555 aaKnown RBP9.32□□□□□ -0.92
SHC4-202ENST00000396535 DHX29Q7Z478 1369 aaKnown RBP9.32□□□□□ -0.92
SHC4-202ENST00000396535 NAIPQ13075 1403 aa9.31□□□□□ -0.92
SHC4-202ENST00000396535 HSP90AA1P07900 732 aaKnown RBP9.31□□□□□ -0.92
SHC4-202ENST00000396535 ATXN8OSP0DMR3 200 aa9.31□□□□□ -0.92
SHC4-202ENST00000396535 NAP1L5Q96NT1 182 aaPredicted RBP9.31□□□□□ -0.92
SHC4-202ENST00000396535 DAXXQ9UER7 740 aaPredicted RBP9.31□□□□□ -0.92
SHC4-202ENST00000396535 CADPSQ9ULU8 1353 aa9.3□□□□□ -0.92
SHC4-202ENST00000396535 DENND4BO75064 1496 aaPredicted RBP9.3□□□□□ -0.92
SHC4-202ENST00000396535 FGD6Q6ZV73 1430 aa9.3□□□□□ -0.92
SHC4-202ENST00000396535 HOXD11P31277 338 aaPredicted RBP9.29□□□□□ -0.92
SHC4-202ENST00000396535 PNISRQ8TF01 805 aaKnown RBP9.29□□□□□ -0.92
SHC4-202ENST00000396535 POGKQ9P215 609 aa9.29□□□□□ -0.92
SHC4-202ENST00000396535 SPATA31E1Q6ZUB1 1445 aa9.29□□□□□ -0.92
SHC4-202ENST00000396535 PNNQ9H307 717 aaKnown RBP9.29□□□□□ -0.92
SHC4-202ENST00000396535 RCAN3Q9UKA8 241 aa9.29□□□□□ -0.92
SHC4-202ENST00000396535 FMN1Q68DA7 1419 aa9.28□□□□□ -0.92
SHC4-202ENST00000396535 CLCN1P35523 988 aa9.28□□□□□ -0.92
SHC4-202ENST00000396535 MKRN4PQ13434 485 aaPredicted RBP9.27□□□□□ -0.93
SHC4-202ENST00000396535 L1TD1Q5T7N2 865 aaKnown RBP9.27□□□□□ -0.93
SHC4-202ENST00000396535 L3MBTL2Q969R5 705 aa9.27□□□□□ -0.93
SHC4-202ENST00000396535 LRPPRCP42704 1394 aaKnown RBP9.27□□□□□ -0.93
SHC4-202ENST00000396535 CUX1P39880 1505 aa9.26□□□□□ -0.93
SHC4-202ENST00000396535 HECW1Q76N89 1606 aa9.26□□□□□ -0.93
SHC4-202ENST00000396535 C8orf34Q49A92 452 aa9.25□□□□□ -0.93
SHC4-202ENST00000396535 THOC2Q8NI27 1593 aaKnown RBP9.25□□□□□ -0.93
SHC4-202ENST00000396535 RGL2O15211 777 aa9.24□□□□□ -0.93
SHC4-202ENST00000396535 CNGB1Q14028 1251 aaPredicted RBP9.24□□□□□ -0.93
SHC4-202ENST00000396535 NBPF8Q3BBV2 869 aa9.24□□□□□ -0.93
SHC4-202ENST00000396535 FANCD2Q9BXW9 1451 aa9.24□□□□□ -0.93
SHC4-202ENST00000396535 FYCO1Q9BQS8 1478 aa9.24□□□□□ -0.93
SHC4-202ENST00000396535 FAM161AQ3B820 660 aa9.24□□□□□ -0.93
SHC4-202ENST00000396535 KDM2BQ8NHM5 1336 aa9.23□□□□□ -0.93
SHC4-202ENST00000396535 MYOM3Q5VTT5 1437 aa9.23□□□□□ -0.93
SHC4-202ENST00000396535 SPDYE4A6NLX3 237 aa9.23□□□□□ -0.93
SHC4-202ENST00000396535 XRCC6P12956 609 aaKnown RBP eCLIP9.22□□□□□ -0.93
SHC4-202ENST00000396535 TMC1Q8TDI8 760 aa9.22□□□□□ -0.93
SHC4-202ENST00000396535 CRBNQ96SW2 442 aa9.22□□□□□ -0.93
SHC4-202ENST00000396535 KTN1Q86UP2 1357 aaKnown RBP9.22□□□□□ -0.93
SHC4-202ENST00000396535 TEX14Q8IWB6 1497 aa9.21□□□□□ -0.93
SHC4-202ENST00000396535 CENPJQ9HC77 1338 aaPredicted RBP9.21□□□□□ -0.93
SHC4-202ENST00000396535 MIA2Q96PC5 1412 aa9.21□□□□□ -0.94
SHC4-202ENST00000396535 PLIN1O60240 522 aa9.21□□□□□ -0.94
SHC4-202ENST00000396535 RBM10P98175 930 aaKnown RBP9.21□□□□□ -0.94
SHC4-202ENST00000396535 ATP1B4Q9UN42 357 aaPredicted RBP9.21□□□□□ -0.94
SHC4-202ENST00000396535 BCORL1Q5H9F3 1711 aa9.2□□□□□ -0.94
SHC4-202ENST00000396535 FSD2A1L4K1 749 aa9.2□□□□□ -0.94
SHC4-202ENST00000396535 CASKIN1Q8WXD9 1431 aa9.2□□□□□ -0.94
SHC4-202ENST00000396535 PRDM4Q9UKN5 801 aa9.2□□□□□ -0.94
SHC4-202ENST00000396535 IGF1RP08069 1367 aa9.2□□□□□ -0.94
SHC4-202ENST00000396535 GCC2Q8IWJ2 1684 aa9.2□□□□□ -0.94
SHC4-202ENST00000396535 PDE3BQ13370 1112 aa9.19□□□□□ -0.94
SHC4-202ENST00000396535 PANK2Q9BZ23 570 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms