RNA–Protein interactions for RNA: ENST00000396535.7

SHC4-202, Transcript of SHC adaptor protein 4, humanhuman

TSL 1 (best) BASIC

Gene SHC4, Length 2,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-202ENST00000396535 AEBP2Q6ZN18 517 aaPredicted RBP14.19□□□□□ -0.14
SHC4-202ENST00000396535 CHIC1Q5VXU3 224 aa14.19□□□□□ -0.14
SHC4-202ENST00000396535 PHF23Q9BUL5 403 aaPredicted RBP13.01□□□□□ -0.33
SHC4-202ENST00000396535 NISCHQ9Y2I1 1504 aa12.77□□□□□ -0.36
SHC4-202ENST00000396535 EHMT2Q96KQ7 1210 aa12.29□□□□□ -0.44
SHC4-202ENST00000396535 HRCP23327 699 aa12.12□□□□□ -0.47
SHC4-202ENST00000396535 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
SHC4-202ENST00000396535 PPARGC1BQ86YN6 1023 aaKnown RBP11.83□□□□□ -0.52
SHC4-202ENST00000396535 KCNA4P22459 653 aa11.79□□□□□ -0.52
SHC4-202ENST00000396535 ADRA2BP18089 450 aa11.77□□□□□ -0.53
SHC4-202ENST00000396535 PLPPR3Q6T4P5 718 aa11.76□□□□□ -0.53
SHC4-202ENST00000396535 PCGF6Q9BYE7 350 aa11.7□□□□□ -0.54
SHC4-202ENST00000396535 MYT1Q01538 1121 aa11.63□□□□□ -0.55
SHC4-202ENST00000396535 MYO15BQ96JP2 1530 aa11.62□□□□□ -0.55
SHC4-202ENST00000396535 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
SHC4-202ENST00000396535 CSRNP3Q8WYN3 585 aa11.48□□□□□ -0.57
SHC4-202ENST00000396535 SUPT5HO00267 1087 aaKnown RBP11.45□□□□□ -0.58
SHC4-202ENST00000396535 DCAF1Q9Y4B6 1507 aa11.43□□□□□ -0.58
SHC4-202ENST00000396535 SHROOM4Q9ULL8 1493 aa11.42□□□□□ -0.58
SHC4-202ENST00000396535 PPP6R1Q9UPN7 881 aa11.37□□□□□ -0.59
SHC4-202ENST00000396535 CCDC180Q9P1Z9 1646 aa11.34□□□□□ -0.59
SHC4-202ENST00000396535 SLC24A1O60721 1099 aa11.29□□□□□ -0.6
SHC4-202ENST00000396535 TRIM26Q12899 539 aaPredicted RBP11.29□□□□□ -0.6
SHC4-202ENST00000396535 ZEB1P37275 1124 aaPredicted RBP11.28□□□□□ -0.6
SHC4-202ENST00000396535 ACIN1Q9UKV3 1341 aaKnown RBP11.23□□□□□ -0.61
SHC4-202ENST00000396535 SENP3Q9H4L4 574 aaPredicted RBP11.22□□□□□ -0.61
SHC4-202ENST00000396535 NEUROD1Q13562 356 aa11.18□□□□□ -0.62
SHC4-202ENST00000396535 RTN4Q9NQC3 1192 aaKnown RBP11.17□□□□□ -0.62
SHC4-202ENST00000396535 LOC105371045A0A1W2PR82 267 aa11.15□□□□□ -0.63
SHC4-202ENST00000396535 GTF3C3Q9Y5Q9 886 aa11.13□□□□□ -0.63
SHC4-202ENST00000396535 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
SHC4-202ENST00000396535 ZBTB22O15209 634 aa11.04□□□□□ -0.64
SHC4-202ENST00000396535 CENPBP07199 599 aaPredicted RBP11.01□□□□□ -0.65
SHC4-202ENST00000396535 TTBK1Q5TCY1 1321 aaPredicted RBP11□□□□□ -0.65
SHC4-202ENST00000396535 ZCCHC6Q5VYS8 1495 aaKnown RBP10.93□□□□□ -0.66
SHC4-202ENST00000396535 DIEXFQ68CQ4 756 aaKnown RBP10.88□□□□□ -0.67
SHC4-202ENST00000396535 BCL11AQ9H165 835 aa10.86□□□□□ -0.67
SHC4-202ENST00000396535 FOXD1Q16676 465 aa10.78□□□□□ -0.68
SHC4-202ENST00000396535 FAM9AQ8IZU1 332 aaPredicted RBP10.78□□□□□ -0.68
SHC4-202ENST00000396535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.77□□□□□ -0.69
SHC4-202ENST00000396535 TRIM41Q8WV44 630 aa10.75□□□□□ -0.69
SHC4-202ENST00000396535 CCER1Q8TC90 406 aaPredicted RBP10.74□□□□□ -0.69
SHC4-202ENST00000396535 ANP32EQ9BTT0 268 aa10.71□□□□□ -0.69
SHC4-202ENST00000396535 PPP4R3CPQ6ZMV5 832 aa10.7□□□□□ -0.7
SHC4-202ENST00000396535 YTHDC1Q96MU7 727 aaKnown RBP10.7□□□□□ -0.7
SHC4-202ENST00000396535 NPM3O75607 178 aaKnown RBP10.67□□□□□ -0.7
SHC4-202ENST00000396535 ABCC9O60706 1549 aa10.66□□□□□ -0.7
SHC4-202ENST00000396535 ZNF316A6NFI3 1004 aaPredicted RBP10.63□□□□□ -0.71
SHC4-202ENST00000396535 PRKCSHP14314 528 aaPredicted RBP10.6□□□□□ -0.71
SHC4-202ENST00000396535 MIER1Q8N108 512 aa10.59□□□□□ -0.71
SHC4-202ENST00000396535 TSHZ2Q9NRE2 1034 aa10.59□□□□□ -0.71
SHC4-202ENST00000396535 SUPT16HQ9Y5B9 1047 aaKnown RBP10.56□□□□□ -0.72
SHC4-202ENST00000396535 CLSPNQ9HAW4 1339 aa10.54□□□□□ -0.72
SHC4-202ENST00000396535 NACADO15069 1562 aa10.47□□□□□ -0.73
SHC4-202ENST00000396535 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.74
SHC4-202ENST00000396535 AMER1Q5JTC6 1135 aaPredicted RBP10.45□□□□□ -0.74
SHC4-202ENST00000396535 RB1CC1Q8TDY2 1594 aa10.41□□□□□ -0.74
SHC4-202ENST00000396535 UNC13AQ9UPW8 1703 aa10.4□□□□□ -0.74
SHC4-202ENST00000396535 WRNQ14191 1432 aaPredicted RBP eCLIP10.38□□□□□ -0.75
SHC4-202ENST00000396535 RSF1Q96T23 1441 aaPredicted RBP10.37□□□□□ -0.75
SHC4-202ENST00000396535 ERICH6Q7L0X2 663 aa10.33□□□□□ -0.76
SHC4-202ENST00000396535 PIAS4Q8N2W9 510 aaPredicted RBP10.32□□□□□ -0.76
SHC4-202ENST00000396535 FKBP8Q14318 412 aa10.3□□□□□ -0.76
SHC4-202ENST00000396535 RBM19Q9Y4C8 960 aaKnown RBP10.3□□□□□ -0.76
SHC4-202ENST00000396535 SCRIBQ14160 1630 aa10.27□□□□□ -0.76
SHC4-202ENST00000396535 APLP2Q06481 763 aa10.26□□□□□ -0.77
SHC4-202ENST00000396535 MSH5O43196 834 aa10.26□□□□□ -0.77
SHC4-202ENST00000396535 BCANQ96GW7 911 aa10.24□□□□□ -0.77
SHC4-202ENST00000396535 CEP162Q5TB80 1403 aa10.24□□□□□ -0.77
SHC4-202ENST00000396535 NCBP3Q53F19 620 aaKnown RBP10.2□□□□□ -0.78
SHC4-202ENST00000396535 BICRAQ9NZM4 1560 aa10.18□□□□□ -0.78
SHC4-202ENST00000396535 HNRNPUL2Q1KMD3 747 aaKnown RBP10.17□□□□□ -0.78
SHC4-202ENST00000396535 MAPK8IP2Q13387 824 aaPredicted RBP10.16□□□□□ -0.78
SHC4-202ENST00000396535 ANO8Q9HCE9 1232 aaPredicted RBP10.15□□□□□ -0.78
SHC4-202ENST00000396535 TNIKQ9UKE5 1360 aa10.15□□□□□ -0.78
SHC4-202ENST00000396535 FOXD4L1Q9NU39 408 aa10.14□□□□□ -0.79
SHC4-202ENST00000396535 FANCIQ9NVI1 1328 aa10.14□□□□□ -0.79
SHC4-202ENST00000396535 KCNH8Q96L42 1107 aa10.14□□□□□ -0.79
SHC4-202ENST00000396535 MYT1LQ9UL68 1186 aa10.13□□□□□ -0.79
SHC4-202ENST00000396535 EIF4G1Q04637 1599 aaKnown RBP10.12□□□□□ -0.79
SHC4-202ENST00000396535 DEKP35659 375 aaKnown RBP10.11□□□□□ -0.79
SHC4-202ENST00000396535 ITGAEP38570 1179 aa10.1□□□□□ -0.79
SHC4-202ENST00000396535 NEFLP07196 543 aa10.07□□□□□ -0.8
SHC4-202ENST00000396535 DHX57Q6P158 1386 aaKnown RBP10.06□□□□□ -0.8
SHC4-202ENST00000396535 ABCC8Q09428 1581 aa10.05□□□□□ -0.8
SHC4-202ENST00000396535 CCDC88BA6NC98 1476 aa10.04□□□□□ -0.8
SHC4-202ENST00000396535 SALL2Q9Y467 1007 aaPredicted RBP10.03□□□□□ -0.8
SHC4-202ENST00000396535 SOGA1O94964 1423 aa10.02□□□□□ -0.81
SHC4-202ENST00000396535 ERICH6BQ5W0A0 696 aa10.02□□□□□ -0.81
SHC4-202ENST00000396535 MROH2BQ7Z745 1585 aa10□□□□□ -0.81
SHC4-202ENST00000396535 UBTFP17480 764 aaKnown RBP9.99□□□□□ -0.81
SHC4-202ENST00000396535 GOLGA3Q08378 1498 aa9.98□□□□□ -0.81
SHC4-202ENST00000396535 WIZO95785 1651 aa9.98□□□□□ -0.81
SHC4-202ENST00000396535 CECR2Q9BXF3 1484 aa9.98□□□□□ -0.81
SHC4-202ENST00000396535 EEA1Q15075 1411 aa9.98□□□□□ -0.81
SHC4-202ENST00000396535 CDK11AQ9UQ88 783 aaPredicted RBP9.97□□□□□ -0.81
SHC4-202ENST00000396535 UBE2Q2Q8WVN8 375 aa9.96□□□□□ -0.81
SHC4-202ENST00000396535 RUSC2Q8N2Y8 1516 aa9.96□□□□□ -0.82
SHC4-202ENST00000396535 CCDC136Q96JN2 1154 aa9.95□□□□□ -0.82
SHC4-202ENST00000396535 CNKSR2Q8WXI2 1034 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 234.2 ms