RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 FTSJ3Q8IY81 847 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-204ENST00000380756 ROCK2O75116 1388 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-204ENST00000380756 TNNT2P45379 298 aaPredicted RBP16.5■□□□□ 0.23
DNMT3A-204ENST00000380756 RTN4Q9NQC3 1192 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-204ENST00000380756 LRRC9Q6ZRR7 1453 aa16.5■□□□□ 0.23
DNMT3A-204ENST00000380756 ZBED9Q6R2W3 1325 aa16.49■□□□□ 0.23
DNMT3A-204ENST00000380756 NLRP13Q86W25 1043 aa16.49■□□□□ 0.23
DNMT3A-204ENST00000380756 ERICH3Q5RHP9 1530 aa16.48■□□□□ 0.23
DNMT3A-204ENST00000380756 FGD6Q6ZV73 1430 aa16.48■□□□□ 0.23
DNMT3A-204ENST00000380756 FGD5Q6ZNL6 1462 aa16.47■□□□□ 0.23
DNMT3A-204ENST00000380756 IPO9Q96P70 1041 aaKnown RBP16.47■□□□□ 0.23
DNMT3A-204ENST00000380756 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
DNMT3A-204ENST00000380756 CARMIL2Q6F5E8 1435 aa16.46■□□□□ 0.23
DNMT3A-204ENST00000380756 PRXQ9BXM0 1461 aa16.45■□□□□ 0.22
DNMT3A-204ENST00000380756 UACAQ9BZF9 1416 aa16.45■□□□□ 0.22
DNMT3A-204ENST00000380756 ST20-MTHFSA0A0A6YYL1 179 aa16.44■□□□□ 0.22
DNMT3A-204ENST00000380756 PDE3BQ13370 1112 aa16.43■□□□□ 0.22
DNMT3A-204ENST00000380756 GLIPR1L2Q4G1C9 344 aa16.42■□□□□ 0.22
DNMT3A-204ENST00000380756 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
DNMT3A-204ENST00000380756 MAPK8IP3Q9UPT6 1336 aa16.42■□□□□ 0.22
DNMT3A-204ENST00000380756 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
DNMT3A-204ENST00000380756 NCAPD3P42695 1498 aa16.4■□□□□ 0.22
DNMT3A-204ENST00000380756 MYOM3Q5VTT5 1437 aa16.4■□□□□ 0.22
DNMT3A-204ENST00000380756 KIF15Q9NS87 1388 aa16.39■□□□□ 0.21
DNMT3A-204ENST00000380756 HNRNPMP52272 730 aaKnown RBP eCLIP16.39■□□□□ 0.21
DNMT3A-204ENST00000380756 TRIM44Q96DX7 344 aaPredicted RBP16.39■□□□□ 0.21
DNMT3A-204ENST00000380756 GOLGA6L22H0YM25 854 aa16.39■□□□□ 0.21
DNMT3A-204ENST00000380756 USP47Q96K76 1375 aa16.39■□□□□ 0.21
DNMT3A-204ENST00000380756 MYBBP1AQ9BQG0 1328 aaKnown RBP16.38■□□□□ 0.21
DNMT3A-204ENST00000380756 CYB5RLQ6IPT4 315 aa16.38■□□□□ 0.21
DNMT3A-204ENST00000380756 U2SURPO15042 1029 aaKnown RBP16.38■□□□□ 0.21
DNMT3A-204ENST00000380756 MS4A1P11836 297 aa16.38■□□□□ 0.21
DNMT3A-204ENST00000380756 WASHC2AQ641Q2 1341 aa16.37■□□□□ 0.21
DNMT3A-204ENST00000380756 CCDC7Q96M83 1385 aa16.37■□□□□ 0.21
DNMT3A-204ENST00000380756 MORC1Q86VD1 984 aa16.37■□□□□ 0.21
DNMT3A-204ENST00000380756 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
DNMT3A-204ENST00000380756 KANK1Q14678 1352 aa16.35■□□□□ 0.21
DNMT3A-204ENST00000380756 CASKIN1Q8WXD9 1431 aa16.35■□□□□ 0.21
DNMT3A-204ENST00000380756 KIF7Q2M1P5 1343 aa16.35■□□□□ 0.21
DNMT3A-204ENST00000380756 GOLGA2Q08379 1002 aa16.34■□□□□ 0.21
DNMT3A-204ENST00000380756 RSPH4AQ5TD94 716 aa16.33■□□□□ 0.2
DNMT3A-204ENST00000380756 POGKQ9P215 609 aa16.33■□□□□ 0.2
DNMT3A-204ENST00000380756 TOP2BQ02880 1626 aa16.33■□□□□ 0.2
DNMT3A-204ENST00000380756 JPH4Q96JJ6 628 aa16.33■□□□□ 0.2
DNMT3A-204ENST00000380756 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
DNMT3A-204ENST00000380756 EFCAB2Q5VUJ9 269 aa16.32■□□□□ 0.2
DNMT3A-204ENST00000380756 EXOC6Q8TAG9 804 aa16.32■□□□□ 0.2
DNMT3A-204ENST00000380756 RRP1P56182 461 aaKnown RBP16.31■□□□□ 0.2
DNMT3A-204ENST00000380756 CFTRP13569 1480 aa16.31■□□□□ 0.2
DNMT3A-204ENST00000380756 GAPVD1Q14C86 1478 aa16.3■□□□□ 0.2
DNMT3A-204ENST00000380756 CUX1P39880 1505 aa16.3■□□□□ 0.2
DNMT3A-204ENST00000380756 ZNF644Q9H582 1327 aaPredicted RBP16.3■□□□□ 0.2
DNMT3A-204ENST00000380756 NCOA2Q15596 1464 aa16.3■□□□□ 0.2
DNMT3A-204ENST00000380756 PDE4AP27815 886 aa16.3■□□□□ 0.2
DNMT3A-204ENST00000380756 PANK3Q9H999 370 aa16.29■□□□□ 0.2
DNMT3A-204ENST00000380756 NCLP19338 710 aaKnown RBP16.29■□□□□ 0.2
DNMT3A-204ENST00000380756 AEBP2Q6ZN18 517 aaPredicted RBP16.29■□□□□ 0.2
DNMT3A-204ENST00000380756 CHMP4BQ9H444 224 aaKnown RBP16.28■□□□□ 0.2
DNMT3A-204ENST00000380756 PLIN1O60240 522 aa16.27■□□□□ 0.2
DNMT3A-204ENST00000380756 FYCO1Q9BQS8 1478 aa16.27■□□□□ 0.2
DNMT3A-204ENST00000380756 CCDC144AA2RUR9 1427 aa16.27■□□□□ 0.2
DNMT3A-204ENST00000380756 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
DNMT3A-204ENST00000380756 CCDC146Q8IYE0 955 aa16.26■□□□□ 0.19
DNMT3A-204ENST00000380756 SRPK2P78362 688 aaKnown RBP16.25■□□□□ 0.19
DNMT3A-204ENST00000380756 SAFB2Q14151 953 aaKnown RBP eCLIP16.25■□□□□ 0.19
DNMT3A-204ENST00000380756 PNNQ9H307 717 aaKnown RBP16.25■□□□□ 0.19
DNMT3A-204ENST00000380756 U2AF1L5P0DN76 240 aaPredicted RBP16.25■□□□□ 0.19
DNMT3A-204ENST00000380756 U2AF1Q01081 240 aaKnown RBP eCLIP16.25■□□□□ 0.19
DNMT3A-204ENST00000380756 HSCBQ8IWL3 235 aa16.25■□□□□ 0.19
DNMT3A-204ENST00000380756 SLKQ9H2G2 1235 aaPredicted RBP16.25■□□□□ 0.19
DNMT3A-204ENST00000380756 WDR97A6NE52 1622 aa16.25■□□□□ 0.19
DNMT3A-204ENST00000380756 TIAM1Q13009 1591 aa16.24■□□□□ 0.19
DNMT3A-204ENST00000380756 CASC1Q6TDU7 716 aa16.24■□□□□ 0.19
DNMT3A-204ENST00000380756 SPRYD3Q8NCJ5 442 aa16.24■□□□□ 0.19
DNMT3A-204ENST00000380756 GGT6Q6P531 493 aa16.23■□□□□ 0.19
DNMT3A-204ENST00000380756 RWDD1Q9H446 243 aaPredicted RBP16.23■□□□□ 0.19
DNMT3A-204ENST00000380756 HFM1A2PYH4 1435 aa16.22■□□□□ 0.19
DNMT3A-204ENST00000380756 USP35Q9P2H5 1018 aa16.22■□□□□ 0.19
DNMT3A-204ENST00000380756 L1TD1Q5T7N2 865 aaKnown RBP16.22■□□□□ 0.19
DNMT3A-204ENST00000380756 CRBNQ96SW2 442 aa16.21■□□□□ 0.19
DNMT3A-204ENST00000380756 EIF3AQ14152 1382 aaKnown RBP16.21■□□□□ 0.19
DNMT3A-204ENST00000380756 KIF3BO15066 747 aa16.21■□□□□ 0.19
DNMT3A-204ENST00000380756 NAP1L5Q96NT1 182 aaPredicted RBP16.21■□□□□ 0.19
DNMT3A-204ENST00000380756 CENPQQ7L2Z9 268 aaPredicted RBP16.2■□□□□ 0.18
DNMT3A-204ENST00000380756 CENPJQ9HC77 1338 aaPredicted RBP16.2■□□□□ 0.18
DNMT3A-204ENST00000380756 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
DNMT3A-204ENST00000380756 PMFBP1Q8TBY8 1022 aa16.19■□□□□ 0.18
DNMT3A-204ENST00000380756 CLUAP1Q96AJ1 413 aa16.19■□□□□ 0.18
DNMT3A-204ENST00000380756 IPO8O15397 1037 aaKnown RBP16.18■□□□□ 0.18
DNMT3A-204ENST00000380756 SPAG9O60271 1321 aaKnown RBP16.18■□□□□ 0.18
DNMT3A-204ENST00000380756 PLEKHG5O94827 1062 aa16.18■□□□□ 0.18
DNMT3A-204ENST00000380756 NBPF8Q3BBV2 869 aa16.18■□□□□ 0.18
DNMT3A-204ENST00000380756 STK26Q9P289 416 aa16.17■□□□□ 0.18
DNMT3A-204ENST00000380756 FAM161AQ3B820 660 aa16.17■□□□□ 0.18
DNMT3A-204ENST00000380756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.16■□□□□ 0.185e-6■■□□□ 11.5
DNMT3A-204ENST00000380756 CCDC184Q52MB2 194 aa16.16■□□□□ 0.18
DNMT3A-204ENST00000380756 SLC4A3P48751 1232 aa16.15■□□□□ 0.18
DNMT3A-204ENST00000380756 EFCAB5A4FU69 1503 aa16.15■□□□□ 0.18
DNMT3A-204ENST00000380756 C14orf37Q86TY3 774 aa16.15■□□□□ 0.18
DNMT3A-204ENST00000380756 ITPRIPQ8IWB1 547 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms