RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.2
DNMT3A-204ENST00000380756 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
DNMT3A-204ENST00000380756 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.02
DNMT3A-204ENST00000380756 SHROOM4Q9ULL8 1493 aa21.16■□□□□ 0.98
DNMT3A-204ENST00000380756 PCGF6Q9BYE7 350 aa20.3■□□□□ 0.84
DNMT3A-204ENST00000380756 EHMT2Q96KQ7 1210 aa20.28■□□□□ 0.84
DNMT3A-204ENST00000380756 FAM9AQ8IZU1 332 aaPredicted RBP20.04■□□□□ 0.8
DNMT3A-204ENST00000380756 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
DNMT3A-204ENST00000380756 ZEB1P37275 1124 aaPredicted RBP19.76■□□□□ 0.75
DNMT3A-204ENST00000380756 HRCP23327 699 aa19.7■□□□□ 0.74
DNMT3A-204ENST00000380756 CHIC1Q5VXU3 224 aa19.7■□□□□ 0.74
DNMT3A-204ENST00000380756 TTBK1Q5TCY1 1321 aaPredicted RBP19.65■□□□□ 0.74
DNMT3A-204ENST00000380756 APLP2Q06481 763 aa19.65■□□□□ 0.74
DNMT3A-204ENST00000380756 CCER1Q8TC90 406 aaPredicted RBP19.54■□□□□ 0.72
DNMT3A-204ENST00000380756 TRIM26Q12899 539 aaPredicted RBP19.53■□□□□ 0.72
DNMT3A-204ENST00000380756 LOC105371045A0A1W2PR82 267 aa19.5■□□□□ 0.71
DNMT3A-204ENST00000380756 PELP1Q8IZL8 1130 aaKnown RBP19.47■□□□□ 0.71
DNMT3A-204ENST00000380756 CENPBP07199 599 aaPredicted RBP19.44■□□□□ 0.7
DNMT3A-204ENST00000380756 PPARGC1BQ86YN6 1023 aaKnown RBP19.33■□□□□ 0.68
DNMT3A-204ENST00000380756 UBTFP17480 764 aaKnown RBP19.31■□□□□ 0.68
DNMT3A-204ENST00000380756 RANGAP1P46060 587 aaPredicted RBP19.26■□□□□ 0.67
DNMT3A-204ENST00000380756 ABCC9O60706 1549 aa19.11■□□□□ 0.65
DNMT3A-204ENST00000380756 YTHDC1Q96MU7 727 aaKnown RBP19.04■□□□□ 0.64
DNMT3A-204ENST00000380756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.61
DNMT3A-204ENST00000380756 ATP1B4Q9UN42 357 aaPredicted RBP18.87■□□□□ 0.61
DNMT3A-204ENST00000380756 HNRNPUL2Q1KMD3 747 aaKnown RBP18.8■□□□□ 0.6
DNMT3A-204ENST00000380756 ZCCHC6Q5VYS8 1495 aaKnown RBP18.8■□□□□ 0.6
DNMT3A-204ENST00000380756 MYT1Q01538 1121 aa18.75■□□□□ 0.59
DNMT3A-204ENST00000380756 DIEXFQ68CQ4 756 aaKnown RBP18.75■□□□□ 0.59
DNMT3A-204ENST00000380756 NEFLP07196 543 aa18.68■□□□□ 0.58
DNMT3A-204ENST00000380756 PABPN1Q86U42 306 aaKnown RBP eCLIP18.65■□□□□ 0.58
DNMT3A-204ENST00000380756 ITGAEP38570 1179 aa18.63■□□□□ 0.57
DNMT3A-204ENST00000380756 DCAF1Q9Y4B6 1507 aa18.62■□□□□ 0.57
DNMT3A-204ENST00000380756 ERICH6Q7L0X2 663 aa18.61■□□□□ 0.57
DNMT3A-204ENST00000380756 MYO15BQ96JP2 1530 aa18.5■□□□□ 0.55
DNMT3A-204ENST00000380756 GTF3C3Q9Y5Q9 886 aa18.47■□□□□ 0.55
DNMT3A-204ENST00000380756 CCDC180Q9P1Z9 1646 aa18.39■□□□□ 0.53
DNMT3A-204ENST00000380756 ZNF316A6NFI3 1004 aaPredicted RBP18.37■□□□□ 0.53
DNMT3A-204ENST00000380756 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
DNMT3A-204ENST00000380756 ACIN1Q9UKV3 1341 aaKnown RBP18.37■□□□□ 0.53
DNMT3A-204ENST00000380756 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
DNMT3A-204ENST00000380756 FAM50AQ14320 339 aaKnown RBP18.2■□□□□ 0.5
DNMT3A-204ENST00000380756 RSF1Q96T23 1441 aaPredicted RBP18.14■□□□□ 0.49
DNMT3A-204ENST00000380756 NEUROD1Q13562 356 aa18.13■□□□□ 0.49
DNMT3A-204ENST00000380756 POLR3GLQ9BT43 218 aa18.12■□□□□ 0.49
DNMT3A-204ENST00000380756 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.48
DNMT3A-204ENST00000380756 CNGB1Q14028 1251 aaPredicted RBP18.05■□□□□ 0.48
DNMT3A-204ENST00000380756 BCANQ96GW7 911 aa18.03■□□□□ 0.48
DNMT3A-204ENST00000380756 ANP32CO43423 234 aa17.98■□□□□ 0.47
DNMT3A-204ENST00000380756 TRIM52Q96A61 297 aa17.94■□□□□ 0.46
DNMT3A-204ENST00000380756 P3H3Q8IVL6 736 aa17.88■□□□□ 0.45
DNMT3A-204ENST00000380756 RB1CC1Q8TDY2 1594 aa17.86■□□□□ 0.45
DNMT3A-204ENST00000380756 MIER1Q8N108 512 aa17.85■□□□□ 0.45
DNMT3A-204ENST00000380756 CEP162Q5TB80 1403 aa17.85■□□□□ 0.45
DNMT3A-204ENST00000380756 CLSPNQ9HAW4 1339 aa17.83■□□□□ 0.44
DNMT3A-204ENST00000380756 CLIP1P30622 1438 aa17.81■□□□□ 0.44
DNMT3A-204ENST00000380756 DAXXQ9UER7 740 aaPredicted RBP17.8■□□□□ 0.44
DNMT3A-204ENST00000380756 EEA1Q15075 1411 aa17.8■□□□□ 0.44
DNMT3A-204ENST00000380756 CDK11AQ9UQ88 783 aaPredicted RBP17.76■□□□□ 0.43
DNMT3A-204ENST00000380756 DDX10Q13206 875 aaKnown RBP17.74■□□□□ 0.43
DNMT3A-204ENST00000380756 TNIKQ9UKE5 1360 aa17.74■□□□□ 0.43
DNMT3A-204ENST00000380756 FBLN2P98095 1184 aa17.73■□□□□ 0.43
DNMT3A-204ENST00000380756 GOLGA3Q08378 1498 aa17.72■□□□□ 0.43
DNMT3A-204ENST00000380756 FKBP8Q14318 412 aa17.7■□□□□ 0.42
DNMT3A-204ENST00000380756 CECR2Q9BXF3 1484 aa17.7■□□□□ 0.42
DNMT3A-204ENST00000380756 ZNF326Q5BKZ1 582 aaKnown RBP17.7■□□□□ 0.42
DNMT3A-204ENST00000380756 MYT1LQ9UL68 1186 aa17.7■□□□□ 0.42
DNMT3A-204ENST00000380756 RTL5Q5HYW3 569 aaPredicted RBP17.69■□□□□ 0.42
DNMT3A-204ENST00000380756 NACADO15069 1562 aa17.67■□□□□ 0.42
DNMT3A-204ENST00000380756 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
DNMT3A-204ENST00000380756 WRNQ14191 1432 aaPredicted RBP eCLIP17.65■□□□□ 0.42
DNMT3A-204ENST00000380756 ARID3CA6NKF2 412 aa17.61■□□□□ 0.41
DNMT3A-204ENST00000380756 HNRNPUQ00839 825 aaKnown RBP eCLIP17.58■□□□□ 0.4
DNMT3A-204ENST00000380756 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
DNMT3A-204ENST00000380756 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
DNMT3A-204ENST00000380756 SOGA1O94964 1423 aa17.53■□□□□ 0.4
DNMT3A-204ENST00000380756 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
DNMT3A-204ENST00000380756 HIRIP3Q9BW71 556 aaPredicted RBP17.5■□□□□ 0.39
DNMT3A-204ENST00000380756 SLC4A1APQ9BWU0 796 aaKnown RBP17.47■□□□□ 0.39
DNMT3A-204ENST00000380756 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
DNMT3A-204ENST00000380756 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
DNMT3A-204ENST00000380756 ZNF777Q9ULD5 760 aaPredicted RBP17.43■□□□□ 0.38
DNMT3A-204ENST00000380756 MTUS2Q5JR59 1369 aa17.43■□□□□ 0.38
DNMT3A-204ENST00000380756 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
DNMT3A-204ENST00000380756 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
DNMT3A-204ENST00000380756 ANP32AP39687 249 aaKnown RBP17.39■□□□□ 0.38
DNMT3A-204ENST00000380756 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
DNMT3A-204ENST00000380756 ABCC8Q09428 1581 aa17.37■□□□□ 0.37
DNMT3A-204ENST00000380756 MRS2Q9HD23 443 aa17.34■□□□□ 0.37
DNMT3A-204ENST00000380756 VPS8Q8N3P4 1428 aa17.33■□□□□ 0.37
DNMT3A-204ENST00000380756 NPM1P06748 294 aaKnown RBP eCLIP17.33■□□□□ 0.36
DNMT3A-204ENST00000380756 IRX6P78412 446 aaPredicted RBP17.31■□□□□ 0.36
DNMT3A-204ENST00000380756 EIF4G2P78344 907 aaKnown RBP eCLIP17.31■□□□□ 0.36
DNMT3A-204ENST00000380756 SIN3AQ96ST3 1273 aa17.3■□□□□ 0.36
DNMT3A-204ENST00000380756 CCNB3Q8WWL7 1395 aa17.3■□□□□ 0.36
DNMT3A-204ENST00000380756 RRP7BPQ9NSQ0 103 aa17.29■□□□□ 0.36
DNMT3A-204ENST00000380756 SUPT16HQ9Y5B9 1047 aaKnown RBP17.29■□□□□ 0.36
DNMT3A-204ENST00000380756 ERCC6Q03468 1493 aa17.27■□□□□ 0.36
DNMT3A-204ENST00000380756 NPM2Q86SE8 214 aaKnown RBP17.27■□□□□ 0.36
DNMT3A-204ENST00000380756 TMC1Q8TDI8 760 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms