RNA–Protein interactions for RNA: ENST00000378748.7

OPTN-203, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-203ENST00000378748 NEUROD2Q15784 382 aa11.44□□□□□ -0.58
OPTN-203ENST00000378748 NUP155O75694 1391 aa11.44□□□□□ -0.58
OPTN-203ENST00000378748 ERCC6Q03468 1493 aa11.43□□□□□ -0.58
OPTN-203ENST00000378748 MAPKBP1O60336 1514 aa11.43□□□□□ -0.58
OPTN-203ENST00000378748 JPH4Q96JJ6 628 aa11.42□□□□□ -0.58
OPTN-203ENST00000378748 PLIN1O60240 522 aa11.42□□□□□ -0.58
OPTN-203ENST00000378748 CDK13Q14004 1512 aaKnown RBP11.41□□□□□ -0.58
OPTN-203ENST00000378748 KIF7Q2M1P5 1343 aa11.41□□□□□ -0.58
OPTN-203ENST00000378748 MYOM3Q5VTT5 1437 aa11.4□□□□□ -0.58
OPTN-203ENST00000378748 PPP4R2Q9NY27 417 aa11.4□□□□□ -0.58
OPTN-203ENST00000378748 SKAP1Q86WV1 359 aa11.39□□□□□ -0.59
OPTN-203ENST00000378748 LAS1LQ9Y4W2 734 aaKnown RBP11.39□□□□□ -0.59
OPTN-203ENST00000378748 FYCO1Q9BQS8 1478 aa11.39□□□□□ -0.59
OPTN-203ENST00000378748 RTL5Q5HYW3 569 aaPredicted RBP11.39□□□□□ -0.59
OPTN-203ENST00000378748 NUTM2DQ5VT03 806 aaPredicted RBP11.39□□□□□ -0.59
OPTN-203ENST00000378748 CASKIN1Q8WXD9 1431 aa11.39□□□□□ -0.59
OPTN-203ENST00000378748 DAXXQ9UER7 740 aaPredicted RBP11.39□□□□□ -0.59
OPTN-203ENST00000378748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.38□□□□□ -0.59
OPTN-203ENST00000378748 SAFB2Q14151 953 aaKnown RBP eCLIP11.38□□□□□ -0.59
OPTN-203ENST00000378748 NAIPQ13075 1403 aa11.37□□□□□ -0.59
OPTN-203ENST00000378748 UACAQ9BZF9 1416 aa11.37□□□□□ -0.59
OPTN-203ENST00000378748 ANP32AP39687 249 aaKnown RBP11.37□□□□□ -0.59
OPTN-203ENST00000378748 ARXQ96QS3 562 aa11.37□□□□□ -0.59
OPTN-203ENST00000378748 PRG4Q92954 1404 aaPredicted RBP11.36□□□□□ -0.59
OPTN-203ENST00000378748 CANXP27824 592 aaKnown RBP11.35□□□□□ -0.59
OPTN-203ENST00000378748 NBPF1Q3BBV0 1214 aa11.35□□□□□ -0.59
OPTN-203ENST00000378748 RGS3P49796 1198 aa11.34□□□□□ -0.59
OPTN-203ENST00000378748 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
OPTN-203ENST00000378748 CCDC146Q8IYE0 955 aa11.33□□□□□ -0.6
OPTN-203ENST00000378748 CFAP43Q8NDM7 1665 aa11.33□□□□□ -0.6
OPTN-203ENST00000378748 CCDC7Q96M83 1385 aa11.33□□□□□ -0.6
OPTN-203ENST00000378748 URB2Q14146 1524 aaKnown RBP11.32□□□□□ -0.6
OPTN-203ENST00000378748 CDCA7LQ96GN5 454 aa11.32□□□□□ -0.6
OPTN-203ENST00000378748 AKNAQ7Z591 1439 aa11.32□□□□□ -0.6
OPTN-203ENST00000378748 USP47Q96K76 1375 aa11.32□□□□□ -0.6
OPTN-203ENST00000378748 CTTNBP2Q8WZ74 1663 aa11.32□□□□□ -0.6
OPTN-203ENST00000378748 WDR43Q15061 677 aaKnown RBP eCLIP11.31□□□□□ -0.6
OPTN-203ENST00000378748 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
OPTN-203ENST00000378748 MSH5O43196 834 aa11.31□□□□□ -0.6
OPTN-203ENST00000378748 EXOC6Q8TAG9 804 aa11.31□□□□□ -0.6
OPTN-203ENST00000378748 ROCK2O75116 1388 aaKnown RBP11.31□□□□□ -0.6
OPTN-203ENST00000378748 HFM1A2PYH4 1435 aa11.3□□□□□ -0.6
OPTN-203ENST00000378748 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
OPTN-203ENST00000378748 ZNF608Q9ULD9 1512 aaPredicted RBP11.29□□□□□ -0.6
OPTN-203ENST00000378748 THOC2Q8NI27 1593 aaKnown RBP11.29□□□□□ -0.6
OPTN-203ENST00000378748 SLC4A3P48751 1232 aa11.29□□□□□ -0.6
OPTN-203ENST00000378748 ABCA5Q8WWZ7 1642 aa11.28□□□□□ -0.6
OPTN-203ENST00000378748 PANK3Q9H999 370 aa11.27□□□□□ -0.6
OPTN-203ENST00000378748 KNSTRNQ9Y448 316 aa11.27□□□□□ -0.61
OPTN-203ENST00000378748 GGT6Q6P531 493 aa11.26□□□□□ -0.61
OPTN-203ENST00000378748 FRAT1Q92837 279 aaPredicted RBP11.26□□□□□ -0.61
OPTN-203ENST00000378748 NUDCQ9Y266 331 aa11.26□□□□□ -0.61
OPTN-203ENST00000378748 ANKRD30AQ9BXX3 1397 aa11.25□□□□□ -0.61
OPTN-203ENST00000378748 PPM1GO15355 546 aaPredicted RBP11.25□□□□□ -0.61
OPTN-203ENST00000378748 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
OPTN-203ENST00000378748 PLB1Q6P1J6 1458 aa11.25□□□□□ -0.61
OPTN-203ENST00000378748 RCAN3Q9UKA8 241 aa11.25□□□□□ -0.61
OPTN-203ENST00000378748 RRP7AQ9Y3A4 280 aaKnown RBP11.24□□□□□ -0.61
OPTN-203ENST00000378748 KIF21AQ7Z4S6 1674 aa11.23□□□□□ -0.61
OPTN-203ENST00000378748 CNTLNQ9NXG0 1405 aa11.23□□□□□ -0.61
OPTN-203ENST00000378748 AFAP1Q8N556 730 aa11.23□□□□□ -0.61
OPTN-203ENST00000378748 NOP58Q9Y2X3 529 aaKnown RBP11.23□□□□□ -0.61
OPTN-203ENST00000378748 MRC2Q9UBG0 1479 aa11.23□□□□□ -0.61
OPTN-203ENST00000378748 SAMD9Q5K651 1589 aa11.23□□□□□ -0.61
OPTN-203ENST00000378748 EPRSP07814 1512 aaKnown RBP11.23□□□□□ -0.61
OPTN-203ENST00000378748 KIF3BO15066 747 aa11.22□□□□□ -0.61
OPTN-203ENST00000378748 STK26Q9P289 416 aa11.22□□□□□ -0.61
OPTN-203ENST00000378748 SLC24A1O60721 1099 aa11.22□□□□□ -0.61
OPTN-203ENST00000378748 BCL2L13Q9BXK5 485 aa11.22□□□□□ -0.61
OPTN-203ENST00000378748 ZBED9Q6R2W3 1325 aa11.21□□□□□ -0.61
OPTN-203ENST00000378748 EHBP1L1Q8N3D4 1523 aa11.21□□□□□ -0.61
OPTN-203ENST00000378748 GRIN2BQ13224 1484 aa11.2□□□□□ -0.62
OPTN-203ENST00000378748 SNAPC4Q5SXM2 1469 aa11.2□□□□□ -0.62
OPTN-203ENST00000378748 DEKP35659 375 aaKnown RBP11.2□□□□□ -0.62
OPTN-203ENST00000378748 ANKRD50Q9ULJ7 1429 aa11.19□□□□□ -0.62
OPTN-203ENST00000378748 IFT140Q96RY7 1462 aa11.19□□□□□ -0.62
OPTN-203ENST00000378748 TMF1P82094 1093 aa11.19□□□□□ -0.62
OPTN-203ENST00000378748 CLUAP1Q96AJ1 413 aa11.19□□□□□ -0.62
OPTN-203ENST00000378748 KIF15Q9NS87 1388 aa11.19□□□□□ -0.62
OPTN-203ENST00000378748 SPRYD3Q8NCJ5 442 aa11.19□□□□□ -0.62
OPTN-203ENST00000378748 TRAK1Q9UPV9 953 aa11.19□□□□□ -0.62
OPTN-203ENST00000378748 PTPN23Q9H3S7 1636 aa11.19□□□□□ -0.62
OPTN-203ENST00000378748 ABCC5O15440 1437 aa11.18□□□□□ -0.62
OPTN-203ENST00000378748 DAPK1P53355 1430 aa11.18□□□□□ -0.62
OPTN-203ENST00000378748 CARMIL2Q6F5E8 1435 aa11.18□□□□□ -0.62
OPTN-203ENST00000378748 TARBP1Q13395 1621 aaKnown RBP11.18□□□□□ -0.62
OPTN-203ENST00000378748 ANKRD30BQ9BXX2 1392 aa11.18□□□□□ -0.62
OPTN-203ENST00000378748 MLECQ14165 292 aa11.18□□□□□ -0.62
OPTN-203ENST00000378748 CRBNQ96SW2 442 aa11.18□□□□□ -0.62
OPTN-203ENST00000378748 STAG3Q9UJ98 1225 aa11.18□□□□□ -0.62
OPTN-203ENST00000378748 SUPT6HQ7KZ85 1726 aaKnown RBP11.18□□□□□ -0.62
OPTN-203ENST00000378748 KTN1Q86UP2 1357 aaKnown RBP11.17□□□□□ -0.62
OPTN-203ENST00000378748 NEFMP07197 916 aa11.17□□□□□ -0.62
OPTN-203ENST00000378748 PTPRGP23470 1445 aa11.17□□□□□ -0.62
OPTN-203ENST00000378748 HECW1Q76N89 1606 aa11.16□□□□□ -0.62
OPTN-203ENST00000378748 PNISRQ8TF01 805 aaKnown RBP11.16□□□□□ -0.62
OPTN-203ENST00000378748 SOX12O15370 315 aa11.16□□□□□ -0.62
OPTN-203ENST00000378748 IQGAP2Q13576 1575 aa11.16□□□□□ -0.62
OPTN-203ENST00000378748 MAGI3Q5TCQ9 1506 aa11.15□□□□□ -0.62
OPTN-203ENST00000378748 NLRP13Q86W25 1043 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms