RNA–Protein interactions for RNA: ENST00000378748.7

OPTN-203, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-203ENST00000378748 NISCHQ9Y2I1 1504 aa16.28■□□□□ 0.2
OPTN-203ENST00000378748 DCAF8L2P0C7V8 631 aa15.22■□□□□ 0.03
OPTN-203ENST00000378748 SHROOM4Q9ULL8 1493 aa15.14■□□□□ 0.01
OPTN-203ENST00000378748 SUPT5HO00267 1087 aaKnown RBP15□□□□□ -0.01
OPTN-203ENST00000378748 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
OPTN-203ENST00000378748 PCGF6Q9BYE7 350 aa14.12□□□□□ -0.15
OPTN-203ENST00000378748 FAM9AQ8IZU1 332 aaPredicted RBP14.09□□□□□ -0.15
OPTN-203ENST00000378748 CCDC180Q9P1Z9 1646 aa13.99□□□□□ -0.17
OPTN-203ENST00000378748 LOC105371045A0A1W2PR82 267 aa13.97□□□□□ -0.17
OPTN-203ENST00000378748 CHIC1Q5VXU3 224 aa13.9□□□□□ -0.18
OPTN-203ENST00000378748 TTBK1Q5TCY1 1321 aaPredicted RBP13.89□□□□□ -0.19
OPTN-203ENST00000378748 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
OPTN-203ENST00000378748 ZCCHC6Q5VYS8 1495 aaKnown RBP13.75□□□□□ -0.21
OPTN-203ENST00000378748 TRIM41Q8WV44 630 aa13.64□□□□□ -0.23
OPTN-203ENST00000378748 MYO15BQ96JP2 1530 aa13.58□□□□□ -0.24
OPTN-203ENST00000378748 HRCP23327 699 aa13.57□□□□□ -0.24
OPTN-203ENST00000378748 RANGAP1P46060 587 aaPredicted RBP13.56□□□□□ -0.24
OPTN-203ENST00000378748 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
OPTN-203ENST00000378748 ABCC9O60706 1549 aa13.38□□□□□ -0.27
OPTN-203ENST00000378748 TRIM26Q12899 539 aaPredicted RBP13.32□□□□□ -0.28
OPTN-203ENST00000378748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.26□□□□□ -0.29
OPTN-203ENST00000378748 CCER1Q8TC90 406 aaPredicted RBP13.26□□□□□ -0.29
OPTN-203ENST00000378748 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.297e-9■□□□□ 10
OPTN-203ENST00000378748 UBTFP17480 764 aaKnown RBP13.23□□□□□ -0.29
OPTN-203ENST00000378748 SCRIBQ14160 1630 aa13.18□□□□□ -0.3
OPTN-203ENST00000378748 YTHDC1Q96MU7 727 aaKnown RBP13.12□□□□□ -0.31
OPTN-203ENST00000378748 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
OPTN-203ENST00000378748 NACADO15069 1562 aa12.99□□□□□ -0.33
OPTN-203ENST00000378748 APLP2Q06481 763 aa12.98□□□□□ -0.33
OPTN-203ENST00000378748 RSF1Q96T23 1441 aaPredicted RBP12.96□□□□□ -0.33
OPTN-203ENST00000378748 ITGAEP38570 1179 aa12.96□□□□□ -0.33
OPTN-203ENST00000378748 ATP1B4Q9UN42 357 aaPredicted RBP12.95□□□□□ -0.34
OPTN-203ENST00000378748 ZEB1P37275 1124 aaPredicted RBP12.94□□□□□ -0.34
OPTN-203ENST00000378748 CECR2Q9BXF3 1484 aa12.92□□□□□ -0.34
OPTN-203ENST00000378748 RB1CC1Q8TDY2 1594 aa12.81□□□□□ -0.36
OPTN-203ENST00000378748 DIEXFQ68CQ4 756 aaKnown RBP12.79□□□□□ -0.36
OPTN-203ENST00000378748 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
OPTN-203ENST00000378748 SCAF1Q9H7N4 1312 aaKnown RBP12.7□□□□□ -0.38
OPTN-203ENST00000378748 MROH2BQ7Z745 1585 aa12.7□□□□□ -0.38
OPTN-203ENST00000378748 GTF3C3Q9Y5Q9 886 aa12.69□□□□□ -0.38
OPTN-203ENST00000378748 CENPBP07199 599 aaPredicted RBP12.68□□□□□ -0.38
OPTN-203ENST00000378748 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
OPTN-203ENST00000378748 P3H3Q8IVL6 736 aa12.65□□□□□ -0.38
OPTN-203ENST00000378748 ABCC8Q09428 1581 aa12.62□□□□□ -0.39
OPTN-203ENST00000378748 SOGA1O94964 1423 aa12.61□□□□□ -0.39
OPTN-203ENST00000378748 CNGB1Q14028 1251 aaPredicted RBP12.6□□□□□ -0.39
OPTN-203ENST00000378748 WIZO95785 1651 aa12.59□□□□□ -0.39
OPTN-203ENST00000378748 BAZ1AQ9NRL2 1556 aaPredicted RBP12.59□□□□□ -0.39
OPTN-203ENST00000378748 CCDC88BA6NC98 1476 aa12.55□□□□□ -0.4
OPTN-203ENST00000378748 ARID3CA6NKF2 412 aa12.53□□□□□ -0.4
OPTN-203ENST00000378748 ACIN1Q9UKV3 1341 aaKnown RBP12.53□□□□□ -0.4
OPTN-203ENST00000378748 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.41
OPTN-203ENST00000378748 CEP162Q5TB80 1403 aa12.51□□□□□ -0.41
OPTN-203ENST00000378748 FAM50AQ14320 339 aaKnown RBP12.51□□□□□ -0.41
OPTN-203ENST00000378748 ZNF316A6NFI3 1004 aaPredicted RBP12.5□□□□□ -0.41
OPTN-203ENST00000378748 MIER1Q8N108 512 aa12.49□□□□□ -0.41
OPTN-203ENST00000378748 HIRIP3Q9BW71 556 aaPredicted RBP12.49□□□□□ -0.41
OPTN-203ENST00000378748 BCANQ96GW7 911 aa12.46□□□□□ -0.41
OPTN-203ENST00000378748 TOP2AP11388 1531 aaKnown RBP12.41□□□□□ -0.42
OPTN-203ENST00000378748 SMARCA4P51532 1647 aa12.39□□□□□ -0.43
OPTN-203ENST00000378748 CLIP1P30622 1438 aa12.36□□□□□ -0.43
OPTN-203ENST00000378748 WRNQ14191 1432 aaPredicted RBP eCLIP12.35□□□□□ -0.43
OPTN-203ENST00000378748 POLR3GLQ9BT43 218 aa12.35□□□□□ -0.43
OPTN-203ENST00000378748 PELP1Q8IZL8 1130 aaKnown RBP12.34□□□□□ -0.43
OPTN-203ENST00000378748 KANK4Q5T7N3 995 aaPredicted RBP12.33□□□□□ -0.43
OPTN-203ENST00000378748 UNC13AQ9UPW8 1703 aa12.29□□□□□ -0.44
OPTN-203ENST00000378748 TNIKQ9UKE5 1360 aa12.29□□□□□ -0.44
OPTN-203ENST00000378748 SENP3-EIF4A1A0A087X0R7 540 aa12.28□□□□□ -0.44
OPTN-203ENST00000378748 EEA1Q15075 1411 aa12.28□□□□□ -0.44
OPTN-203ENST00000378748 DDX10Q13206 875 aaKnown RBP12.27□□□□□ -0.44
OPTN-203ENST00000378748 SMARCA2P51531 1590 aa12.25□□□□□ -0.45
OPTN-203ENST00000378748 SIN3AQ96ST3 1273 aa12.24□□□□□ -0.45
OPTN-203ENST00000378748 GOLGA3Q08378 1498 aa12.24□□□□□ -0.45
OPTN-203ENST00000378748 EIF4G1Q04637 1599 aaKnown RBP12.24□□□□□ -0.45
OPTN-203ENST00000378748 PEG3Q9GZU2 1588 aa12.23□□□□□ -0.45
OPTN-203ENST00000378748 CHIC2Q9UKJ5 165 aa12.23□□□□□ -0.45
OPTN-203ENST00000378748 TRIM52Q96A61 297 aa12.21□□□□□ -0.45
OPTN-203ENST00000378748 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.45
OPTN-203ENST00000378748 BAZ1BQ9UIG0 1483 aaKnown RBP12.21□□□□□ -0.46
OPTN-203ENST00000378748 KCNH8Q96L42 1107 aa12.19□□□□□ -0.46
OPTN-203ENST00000378748 RAPGEF2Q9Y4G8 1499 aa12.18□□□□□ -0.46
OPTN-203ENST00000378748 ZNF326Q5BKZ1 582 aaKnown RBP12.17□□□□□ -0.46
OPTN-203ENST00000378748 FBLN2P98095 1184 aa12.16□□□□□ -0.46
OPTN-203ENST00000378748 IRX6P78412 446 aaPredicted RBP12.13□□□□□ -0.47
OPTN-203ENST00000378748 NEFLP07196 543 aa12.12□□□□□ -0.47
OPTN-203ENST00000378748 ATAD2BQ9ULI0 1458 aa12.12□□□□□ -0.47
OPTN-203ENST00000378748 CEP164Q9UPV0 1460 aa12.12□□□□□ -0.47
OPTN-203ENST00000378748 RRP7BPQ9NSQ0 103 aa12.09□□□□□ -0.47
OPTN-203ENST00000378748 FKBP8Q14318 412 aa12.08□□□□□ -0.47
OPTN-203ENST00000378748 ZNF777Q9ULD5 760 aaPredicted RBP12.06□□□□□ -0.48
OPTN-203ENST00000378748 VPS8Q8N3P4 1428 aa12.06□□□□□ -0.48
OPTN-203ENST00000378748 ANP32CO43423 234 aa12.01□□□□□ -0.49
OPTN-203ENST00000378748 FOXD1Q16676 465 aa12.01□□□□□ -0.49
OPTN-203ENST00000378748 CUX2O14529 1486 aa12□□□□□ -0.49
OPTN-203ENST00000378748 SYNJ1O43426 1573 aa12□□□□□ -0.49
OPTN-203ENST00000378748 KIF27Q86VH2 1401 aa11.98□□□□□ -0.49
OPTN-203ENST00000378748 DNAJC5BQ9UF47 199 aa11.98□□□□□ -0.49
OPTN-203ENST00000378748 HMGXB3Q12766 1538 aa11.98□□□□□ -0.49
OPTN-203ENST00000378748 FAM9BQ8IZU0 186 aa11.97□□□□□ -0.49
OPTN-203ENST00000378748 NCAPD3P42695 1498 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms