RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 JPH4Q96JJ6 628 aa25.1■■□□□ 1.61
CDK13-202ENST00000340829 MORC1Q86VD1 984 aa25.09■■□□□ 1.61
CDK13-202ENST00000340829 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
CDK13-202ENST00000340829 SRPK2P78362 688 aaKnown RBP25.09■■□□□ 1.61
CDK13-202ENST00000340829 MLECQ14165 292 aa25.08■■□□□ 1.61
CDK13-202ENST00000340829 RBM19Q9Y4C8 960 aaKnown RBP25.06■■□□□ 1.6
CDK13-202ENST00000340829 NOP58Q9Y2X3 529 aaKnown RBP25.05■■□□□ 1.6
CDK13-202ENST00000340829 RALBP1Q15311 655 aa25.03■■□□□ 1.6
CDK13-202ENST00000340829 STK26Q9P289 416 aa25.03■■□□□ 1.6
CDK13-202ENST00000340829 RAD54L2Q9Y4B4 1467 aa25.02■■□□□ 1.6
CDK13-202ENST00000340829 KIF21BO75037 1637 aa25.01■■□□□ 1.59
CDK13-202ENST00000340829 A0A0G2JS52 829 aa25.01■■□□□ 1.59
CDK13-202ENST00000340829 KIF3BO15066 747 aa24.99■■□□□ 1.59
CDK13-202ENST00000340829 RCAN3Q9UKA8 241 aa24.97■■□□□ 1.59
CDK13-202ENST00000340829 SOX12O15370 315 aa24.93■■□□□ 1.58
CDK13-202ENST00000340829 LMOD2Q6P5Q4 547 aa24.93■■□□□ 1.58
CDK13-202ENST00000340829 RSPH4AQ5TD94 716 aa24.93■■□□□ 1.58
CDK13-202ENST00000340829 MS4A1P11836 297 aa24.92■■□□□ 1.58
CDK13-202ENST00000340829 GAPVD1Q14C86 1478 aa24.92■■□□□ 1.58
CDK13-202ENST00000340829 NCAPD3P42695 1498 aa24.92■■□□□ 1.58
CDK13-202ENST00000340829 SPAG9O60271 1321 aaKnown RBP24.92■■□□□ 1.58
CDK13-202ENST00000340829 ERICH6BQ5W0A0 696 aa24.92■■□□□ 1.58
CDK13-202ENST00000340829 PNNQ9H307 717 aaKnown RBP24.91■■□□□ 1.58
CDK13-202ENST00000340829 PHLDB1Q86UU1 1377 aa24.91■■□□□ 1.58
CDK13-202ENST00000340829 ST20-MTHFSA0A0A6YYL1 179 aa24.9■■□□□ 1.58
CDK13-202ENST00000340829 TSHZ2Q9NRE2 1034 aa24.89■■□□□ 1.57
CDK13-202ENST00000340829 GOLGA6L22H0YM25 854 aa24.88■■□□□ 1.57
CDK13-202ENST00000340829 SYNJ1O43426 1573 aa24.87■■□□□ 1.57
CDK13-202ENST00000340829 CASC1Q6TDU7 716 aa24.87■■□□□ 1.57
CDK13-202ENST00000340829 NLRP13Q86W25 1043 aa24.87■■□□□ 1.57
CDK13-202ENST00000340829 U2AF1L5P0DN76 240 aaPredicted RBP24.86■■□□□ 1.57
CDK13-202ENST00000340829 U2AF1Q01081 240 aaKnown RBP eCLIP24.86■■□□□ 1.57
CDK13-202ENST00000340829 NCLP19338 710 aaKnown RBP24.85■■□□□ 1.57
CDK13-202ENST00000340829 FGD6Q6ZV73 1430 aa24.85■■□□□ 1.57
CDK13-202ENST00000340829 HAP1P54257 671 aaPredicted RBP24.83■■□□□ 1.57
CDK13-202ENST00000340829 CHMP4BQ9H444 224 aaKnown RBP24.83■■□□□ 1.57
CDK13-202ENST00000340829 PRKRIP1Q9H875 184 aaPredicted RBP24.82■■□□□ 1.56
CDK13-202ENST00000340829 NUTM2DQ5VT03 806 aaPredicted RBP24.82■■□□□ 1.56
CDK13-202ENST00000340829 HDGFL2Q7Z4V5 671 aaPredicted RBP24.82■■□□□ 1.56
CDK13-202ENST00000340829 LRRC9Q6ZRR7 1453 aa24.82■■□□□ 1.56
CDK13-202ENST00000340829 HDGFP51858 240 aaKnown RBP24.82■■□□□ 1.56
CDK13-202ENST00000340829 EIF3AQ14152 1382 aaKnown RBP24.81■■□□□ 1.56
CDK13-202ENST00000340829 CCDC144AA2RUR9 1427 aa24.81■■□□□ 1.56
CDK13-202ENST00000340829 ARAP1Q96P48 1450 aa24.81■■□□□ 1.56
CDK13-202ENST00000340829 ZNF644Q9H582 1327 aaPredicted RBP24.8■■□□□ 1.56
CDK13-202ENST00000340829 PTPRGP23470 1445 aa24.8■■□□□ 1.56
CDK13-202ENST00000340829 CCDC146Q8IYE0 955 aa24.79■■□□□ 1.56
CDK13-202ENST00000340829 MYOM3Q5VTT5 1437 aa24.78■■□□□ 1.56
CDK13-202ENST00000340829 KIF15Q9NS87 1388 aa24.77■■□□□ 1.56
CDK13-202ENST00000340829 TRIM44Q96DX7 344 aaPredicted RBP24.77■■□□□ 1.56
CDK13-202ENST00000340829 USP47Q96K76 1375 aa24.76■■□□□ 1.55
CDK13-202ENST00000340829 PANK3Q9H999 370 aa24.75■■□□□ 1.55
CDK13-202ENST00000340829 WASHC2CQ9Y4E1 1318 aa24.75■■□□□ 1.55
CDK13-202ENST00000340829 TPRNQ4KMQ1 711 aa24.74■■□□□ 1.55
CDK13-202ENST00000340829 GOLGA2Q08379 1002 aa24.74■■□□□ 1.55
CDK13-202ENST00000340829 MYBBP1AQ9BQG0 1328 aaKnown RBP24.74■■□□□ 1.55
CDK13-202ENST00000340829 AQRO60306 1485 aaKnown RBP eCLIP24.73■■□□□ 1.552e-6■■■■■ 32.5
CDK13-202ENST00000340829 HSP90AB1P08238 724 aaKnown RBP24.72■■□□□ 1.55
CDK13-202ENST00000340829 ERICH3Q5RHP9 1530 aa24.72■■□□□ 1.55
CDK13-202ENST00000340829 TRAK1Q9UPV9 953 aa24.71■■□□□ 1.55
CDK13-202ENST00000340829 CFTRP13569 1480 aa24.7■■□□□ 1.54
CDK13-202ENST00000340829 TCERG1O14776 1098 aaKnown RBP24.7■■□□□ 1.54
CDK13-202ENST00000340829 CASKIN1Q8WXD9 1431 aa24.69■■□□□ 1.54
CDK13-202ENST00000340829 UACAQ9BZF9 1416 aa24.69■■□□□ 1.54
CDK13-202ENST00000340829 PDE3BQ13370 1112 aa24.69■■□□□ 1.54
CDK13-202ENST00000340829 TRHP20396 242 aaPredicted RBP24.68■■□□□ 1.54
CDK13-202ENST00000340829 OS9Q13438 667 aaPredicted RBP24.68■■□□□ 1.54
CDK13-202ENST00000340829 SPRYD3Q8NCJ5 442 aa24.68■■□□□ 1.54
CDK13-202ENST00000340829 CUX1P39880 1505 aa24.67■■□□□ 1.54
CDK13-202ENST00000340829 NCOA2Q15596 1464 aa24.66■■□□□ 1.54
CDK13-202ENST00000340829 IPO8O15397 1037 aaKnown RBP24.66■■□□□ 1.54
CDK13-202ENST00000340829 ITPRIPQ8IWB1 547 aa24.66■■□□□ 1.54
CDK13-202ENST00000340829 RTN4Q9NQC3 1192 aaKnown RBP24.64■■□□□ 1.54
CDK13-202ENST00000340829 RTF1Q92541 710 aaKnown RBP24.64■■□□□ 1.54
CDK13-202ENST00000340829 HSCBQ8IWL3 235 aa24.64■■□□□ 1.53
CDK13-202ENST00000340829 RRBP1Q9P2E9 1410 aaKnown RBP24.63■■□□□ 1.53
CDK13-202ENST00000340829 PRXQ9BXM0 1461 aa24.63■■□□□ 1.53
CDK13-202ENST00000340829 CLUAP1Q96AJ1 413 aa24.63■■□□□ 1.53
CDK13-202ENST00000340829 APBB1O00213 710 aa24.62■■□□□ 1.53
CDK13-202ENST00000340829 TERF2IPQ9NYB0 399 aa24.62■■□□□ 1.53
CDK13-202ENST00000340829 ZBED9Q6R2W3 1325 aa24.62■■□□□ 1.53
CDK13-202ENST00000340829 RWDD1Q9H446 243 aaPredicted RBP24.61■■□□□ 1.53
CDK13-202ENST00000340829 DEKP35659 375 aaKnown RBP24.59■■□□□ 1.53
CDK13-202ENST00000340829 SMC4Q9NTJ3 1288 aa24.59■■□□□ 1.53
CDK13-202ENST00000340829 RRP7AQ9Y3A4 280 aaKnown RBP24.58■■□□□ 1.53
CDK13-202ENST00000340829 TOP2BQ02880 1626 aa24.58■■□□□ 1.53
CDK13-202ENST00000340829 FYCO1Q9BQS8 1478 aa24.57■■□□□ 1.52
CDK13-202ENST00000340829 KIF7Q2M1P5 1343 aa24.57■■□□□ 1.52
CDK13-202ENST00000340829 CENPJQ9HC77 1338 aaPredicted RBP24.57■■□□□ 1.52
CDK13-202ENST00000340829 NESP48681 1621 aa24.57■■□□□ 1.52
CDK13-202ENST00000340829 PAK3O75914 559 aaPredicted RBP24.57■■□□□ 1.52
CDK13-202ENST00000340829 CCDC7Q96M83 1385 aa24.56■■□□□ 1.52
CDK13-202ENST00000340829 PLIN1O60240 522 aa24.56■■□□□ 1.52
CDK13-202ENST00000340829 CALD1Q05682 793 aaKnown RBP24.56■■□□□ 1.52
CDK13-202ENST00000340829 PTMAP06454 111 aaKnown RBP24.56■■□□□ 1.52
CDK13-202ENST00000340829 PRDM2Q13029 1718 aa24.54■■□□□ 1.52
CDK13-202ENST00000340829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.54■■□□□ 1.52
CDK13-202ENST00000340829 KCNJ4P48050 445 aa24.53■■□□□ 1.52
CDK13-202ENST00000340829 GLIPR1L2Q4G1C9 344 aa24.52■■□□□ 1.52
CDK13-202ENST00000340829 PMFBP1Q8TBY8 1022 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms