RNA–Protein interactions for RNA: ENSMUST00000101616.8

Smarca1-203, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca1, Length 3,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-203ENSMUST00000101616 Washc2Q6PGL7 1334 aa10.7□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Mroh3A0A1D5RM54 893 aa10.7□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Mfap1aC0HKD8 439 aaKnown RBP10.69□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Mfap1bC0HKD9 439 aaKnown RBP10.69□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Iqcf3Q9D498 203 aa10.69□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Trak1Q6PD31 939 aa10.69□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Fgd1P52734 960 aa10.68□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Mbd3Q9Z2D8 285 aaKnown RBP10.67□□□□□ -0.7
Smarca1-203ENSMUST00000101616 NudcO35685 332 aaKnown RBP10.67□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Ttll13A4Q9F6 804 aa10.67□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Arhgap27A2AB59 869 aa10.66□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Tnnt2P50752 301 aa10.66□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Aebp1Q640N1 1128 aa10.66□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Cecr2E9Q2Z1 1453 aa10.66□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Ipo4Q8VI75 1082 aa10.66□□□□□ -0.7
Smarca1-203ENSMUST00000101616 GorabQ8BRM2 368 aa10.65□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Znf330Q922H9 316 aa10.65□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Senp3Q9EP97 568 aaKnown RBP10.65□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Clstn2Q9ER65 966 aa10.65□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Rrp7aQ9D1C9 280 aaKnown RBP10.65□□□□□ -0.7
Smarca1-203ENSMUST00000101616 Top2bQ64511 1612 aa10.65□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Mre11Q61216 706 aa10.64□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Ak7Q9D2H2 614 aa10.64□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Unc13aQ4KUS2 1712 aa10.64□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Esx1O88933 382 aa10.64□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Rrp12Q6P5B0 1295 aaKnown RBP10.64□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Rpap1Q80TE0 1409 aa10.63□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Irx6Q9ER75 438 aa10.63□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Znf316Q6PGE4 1016 aa10.63□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Gm20521D3Z5F7 333 aa10.62□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Ccdc18Q640L5 1455 aa10.62□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Mtus2Q3UHD3 1353 aa10.62□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Map7O88735 730 aa10.61□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Fhad1A6PWD2 1420 aa10.61□□□□□ -0.71
Smarca1-203ENSMUST00000101616 1700019A02RikA0A087WPV9 146 aa10.61□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Ifit1bl1D3Z6F0 470 aa10.61□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Pdcl3Q8BVF2 240 aa10.6□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Fmn1Q05860 1466 aa10.6□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Rpgrip1lQ8CG73 1264 aa10.6□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Arhgap35Q91YM2 1499 aa10.6□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Mapk8ip3Q9ESN9 1337 aa10.6□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Map4P27546 1125 aaKnown RBP10.59□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Tmco5bQ80X59 307 aa10.59□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Liat1Q810M6 228 aa10.59□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Rfx1P48377 963 aa10.58□□□□□ -0.71
Smarca1-203ENSMUST00000101616 Usp47Q8BY87 1376 aa10.58□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Casc1Q6TDU8 730 aa10.58□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Fyco1Q8VDC1 1437 aa10.57□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Golga2Q921M4 999 aa10.57□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Srpk2O54781 681 aaKnown RBP10.57□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Dcaf11Q91VU6 549 aa10.57□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Inpp5dQ9ES52 1191 aa10.57□□□□□ -0.72
Smarca1-203ENSMUST00000101616 MsnP26041 577 aaKnown RBP10.56□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Gpatch11Q3UFS4 262 aa10.56□□□□□ -0.72
Smarca1-203ENSMUST00000101616 KarsQ99MN1 595 aaKnown RBP10.56□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Slc4a1apE9PX68 744 aa10.56□□□□□ -0.72
Smarca1-203ENSMUST00000101616 L3mbtl2P59178 703 aa10.56□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Q7TT23 1179 aa10.56□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Pank3Q8R2W9 370 aa10.56□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Stk24Q99KH8 431 aa10.56□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Pcmtd1P59913 357 aa10.55□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Prkrip1Q9CWV6 186 aaKnown RBP10.55□□□□□ -0.72
Smarca1-203ENSMUST00000101616 KnstrnQ9D9Z1 312 aaKnown RBP10.55□□□□□ -0.72
Smarca1-203ENSMUST00000101616 CftrP26361 1476 aa10.55□□□□□ -0.72
Smarca1-203ENSMUST00000101616 PnisrA2AJT4 805 aaKnown RBP10.55□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Cttnbp2B9EJA2 1648 aa10.54□□□□□ -0.72
Smarca1-203ENSMUST00000101616 VgfQ0VGU4 617 aa10.54□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Ksr2Q3UVC0 959 aa10.54□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Tmf1B9EKI3 1091 aa10.54□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Plin1Q8CGN5 517 aa10.54□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Ddrgk1Q80WW9 315 aa10.54□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Exosc9Q9JHI7 438 aaKnown RBP10.53□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Zfp444Q3TDV8 331 aaKnown RBP10.53□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Fbxo2Q80UW2 297 aa10.53□□□□□ -0.72
Smarca1-203ENSMUST00000101616 U2af1Q9D883 239 aaKnown RBP10.53□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Kif27Q7M6Z4 1394 aa10.53□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Ncapd3Q6ZQK0 1506 aa10.53□□□□□ -0.72
Smarca1-203ENSMUST00000101616 Zfp644E9QA22 1323 aa10.52□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Samd1D3YXK1 519 aa10.52□□□□□ -0.73
Smarca1-203ENSMUST00000101616 TnnQ80Z71 1560 aa10.51□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Hsp90b1P08113 802 aaKnown RBP10.51□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Ccdc183A2AJB1 534 aa10.5□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Pank1Q8K4K6 548 aa10.5□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Rbm10Q99KG3 930 aaKnown RBP10.5□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Synj1Q8CHC4 1574 aa10.5□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Gpatch8A2A6A1 1505 aa10.5□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Ccnb3Q810T2 1396 aa10.5□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Ubap1lG3UW59 384 aa10.49□□□□□ -0.73
Smarca1-203ENSMUST00000101616 U2surpQ6NV83 1029 aaKnown RBP10.49□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Tnpo1Q8BFY9 898 aaKnown RBP10.49□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Stag3O70576 1240 aa10.48□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Smarca4Q3TKT4 1613 aaKnown RBP10.48□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Paxip1Q6NZQ4 1056 aa10.48□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Srcin1Q9QWI6 1250 aa10.47□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Thoc2B1AZI6 1594 aaKnown RBP10.47□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Dapk1Q80YE7 1442 aa10.47□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Becn1O88597 448 aa10.47□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Kiaa0754Q69ZZ9 979 aa10.47□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Ush1cQ9ES64 910 aa10.47□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Gtf2a1Q99PM3 378 aa10.46□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms