RNA–Protein interactions for RNA: ENSMUST00000101616.8

Smarca1-203, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca1, Length 3,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-203ENSMUST00000101616 Rhox8Q6VSS7 320 aa14.62□□□□□ -0.07
Smarca1-203ENSMUST00000101616 Ehmt2Q9Z148 1263 aaKnown RBP14□□□□□ -0.17
Smarca1-203ENSMUST00000101616 Rpgrip1Q9EPQ2 1331 aa13.88□□□□□ -0.19
Smarca1-203ENSMUST00000101616 Gm35339A0A140LHH9 1649 aa13.82□□□□□ -0.2
Smarca1-203ENSMUST00000101616 Zeb1Q64318 1117 aa13.28□□□□□ -0.28
Smarca1-203ENSMUST00000101616 Las1lA2BE28 776 aaKnown RBP13.25□□□□□ -0.29
Smarca1-203ENSMUST00000101616 Acin1Q9JIX8 1338 aaKnown RBP13.22□□□□□ -0.29
Smarca1-203ENSMUST00000101616 Ccdc136Q3TVA9 1136 aa13.2□□□□□ -0.3
Smarca1-203ENSMUST00000101616 Pcgf6Q99NA9 353 aa13.13□□□□□ -0.31
Smarca1-203ENSMUST00000101616 Wdr66E9Q743 1299 aa13.1□□□□□ -0.31
Smarca1-203ENSMUST00000101616 Gab3Q8BSM5 595 aa12.96□□□□□ -0.34
Smarca1-203ENSMUST00000101616 Cngb1E1AZ71 1325 aa12.91□□□□□ -0.34
Smarca1-203ENSMUST00000101616 Trim41Q5NCC3 630 aa12.9□□□□□ -0.34
Smarca1-203ENSMUST00000101616 Supt5hO55201 1082 aaKnown RBP12.85□□□□□ -0.35
Smarca1-203ENSMUST00000101616 NischQ80TM9 1593 aa12.8□□□□□ -0.36
Smarca1-203ENSMUST00000101616 Abcc9P70170 1546 aa12.76□□□□□ -0.37
Smarca1-203ENSMUST00000101616 CenpbP27790 599 aa12.74□□□□□ -0.37
Smarca1-203ENSMUST00000101616 Ppargc1bQ8VHJ7 1014 aa12.69□□□□□ -0.38
Smarca1-203ENSMUST00000101616 NefmP08553 848 aa12.6□□□□□ -0.39
Smarca1-203ENSMUST00000101616 Neurod1Q60867 357 aa12.59□□□□□ -0.39
Smarca1-203ENSMUST00000101616 UbtfP25976 765 aaKnown RBP12.58□□□□□ -0.4
Smarca1-203ENSMUST00000101616 Cdk11bP24788 784 aaKnown RBP12.54□□□□□ -0.4
Smarca1-203ENSMUST00000101616 Esf1Q3V1V3 845 aaKnown RBP12.54□□□□□ -0.4
Smarca1-203ENSMUST00000101616 HrcG5E8J6 738 aa12.53□□□□□ -0.4
Smarca1-203ENSMUST00000101616 Myt1lP97500 1187 aa12.52□□□□□ -0.4
Smarca1-203ENSMUST00000101616 Ccdc180J3QNE4 1664 aa12.47□□□□□ -0.41
Smarca1-203ENSMUST00000101616 Nop58Q6DFW4 536 aaKnown RBP12.46□□□□□ -0.41
Smarca1-203ENSMUST00000101616 Pelp1Q9DBD5 1123 aaKnown RBP12.46□□□□□ -0.41
Smarca1-203ENSMUST00000101616 Abcc8B2RUS7 1588 aa12.45□□□□□ -0.42
Smarca1-203ENSMUST00000101616 Gm38655A0A286YDK6 273 aa12.44□□□□□ -0.42
Smarca1-203ENSMUST00000101616 Slc24a1Q91WD8 1130 aa12.39□□□□□ -0.43
Smarca1-203ENSMUST00000101616 Ttbk1Q6PCN3 1308 aa12.38□□□□□ -0.43
Smarca1-203ENSMUST00000101616 Csrnp3P59055 597 aa12.38□□□□□ -0.43
Smarca1-203ENSMUST00000101616 Ube2uB1AUC4 352 aa12.37□□□□□ -0.43
Smarca1-203ENSMUST00000101616 Amer1Q7TS75 1132 aa12.37□□□□□ -0.43
Smarca1-203ENSMUST00000101616 Npm2Q80W85 207 aa12.35□□□□□ -0.43
Smarca1-203ENSMUST00000101616 Myt1Q8CFC2 1127 aa12.34□□□□□ -0.43
Smarca1-203ENSMUST00000101616 Mier1Q5UAK0 511 aa12.31□□□□□ -0.44
Smarca1-203ENSMUST00000101616 Sall2Q9QX96 1004 aa12.31□□□□□ -0.44
Smarca1-203ENSMUST00000101616 DiexfQ8BTT6 772 aaKnown RBP12.28□□□□□ -0.44
Smarca1-203ENSMUST00000101616 1700123L14RikQ3V2K7 440 aa12.19□□□□□ -0.46
Smarca1-203ENSMUST00000101616 Anks4bQ8K3X6 423 aa12.17□□□□□ -0.46
Smarca1-203ENSMUST00000101616 Rtl1Q7M732 1744 aa12.12□□□□□ -0.47
Smarca1-203ENSMUST00000101616 Stra8P70278 393 aa12.11□□□□□ -0.47
Smarca1-203ENSMUST00000101616 Eif5bQ05D44 1216 aaKnown RBP12.08□□□□□ -0.48
Smarca1-203ENSMUST00000101616 Tnnt3Q9QZ47 272 aa12.08□□□□□ -0.48
Smarca1-203ENSMUST00000101616 Mapk8ip2Q9ERE9 830 aa12.08□□□□□ -0.48
Smarca1-203ENSMUST00000101616 TonslQ6NZL6 1363 aa12.08□□□□□ -0.48
Smarca1-203ENSMUST00000101616 ClspnQ80YR7 1315 aa12.04□□□□□ -0.48
Smarca1-203ENSMUST00000101616 Aplp2Q06335 707 aa12.03□□□□□ -0.48
Smarca1-203ENSMUST00000101616 NclP09405 707 aaKnown RBP12.01□□□□□ -0.49
Smarca1-203ENSMUST00000101616 Dcaf1Q80TR8 1506 aa12□□□□□ -0.49
Smarca1-203ENSMUST00000101616 Ap3b1Q9Z1T1 1105 aa11.99□□□□□ -0.49
Smarca1-203ENSMUST00000101616 4933416C03RikQ3V063 378 aa11.98□□□□□ -0.49
Smarca1-203ENSMUST00000101616 ScribQ80U72 1612 aa11.98□□□□□ -0.49
Smarca1-203ENSMUST00000101616 Fam50aQ9WV03 339 aaKnown RBP11.95□□□□□ -0.5
Smarca1-203ENSMUST00000101616 Eid3Q3V124 375 aa11.93□□□□□ -0.5
Smarca1-203ENSMUST00000101616 Aebp2Q9Z248 504 aaKnown RBP11.92□□□□□ -0.5
Smarca1-203ENSMUST00000101616 Plekhg3Q4VAC9 1341 aa11.88□□□□□ -0.51
Smarca1-203ENSMUST00000101616 Anp32aO35381 247 aa11.88□□□□□ -0.51
Smarca1-203ENSMUST00000101616 Chic1Q8CBW7 227 aa11.87□□□□□ -0.51
Smarca1-203ENSMUST00000101616 Zcchc6Q5BLK4 1491 aaKnown RBP11.87□□□□□ -0.51
Smarca1-203ENSMUST00000101616 Il27Q8K3I6 234 aa11.86□□□□□ -0.51
Smarca1-203ENSMUST00000101616 Fam71e1A1L3C1 212 aa11.86□□□□□ -0.51
Smarca1-203ENSMUST00000101616 NrdcQ8BHG1 1161 aa11.85□□□□□ -0.51
Smarca1-203ENSMUST00000101616 Rtl5Q5DTT4 599 aa11.78□□□□□ -0.52
Smarca1-203ENSMUST00000101616 SafbD3YXK2 937 aaKnown RBP11.77□□□□□ -0.53
Smarca1-203ENSMUST00000101616 Bcl11aQ9QYE3 773 aa11.76□□□□□ -0.53
Smarca1-203ENSMUST00000101616 DaxxO35613 739 aa11.72□□□□□ -0.53
Smarca1-203ENSMUST00000101616 Ppp4r2Q0VGB7 417 aa11.69□□□□□ -0.54
Smarca1-203ENSMUST00000101616 Cep164Q5DU05 1446 aa11.69□□□□□ -0.54
Smarca1-203ENSMUST00000101616 Calr4Q3TQS0 420 aa11.69□□□□□ -0.54
Smarca1-203ENSMUST00000101616 Hnrnpul2Q00PI9 745 aaKnown RBP11.67□□□□□ -0.54
Smarca1-203ENSMUST00000101616 Lmod2Q3UHZ5 550 aa11.66□□□□□ -0.54
Smarca1-203ENSMUST00000101616 NeflP08551 543 aa11.66□□□□□ -0.54
Smarca1-203ENSMUST00000101616 Wdr43Q6ZQL4 677 aaKnown RBP11.55□□□□□ -0.56
Smarca1-203ENSMUST00000101616 Zbtb4Q5F293 982 aa11.53□□□□□ -0.56
Smarca1-203ENSMUST00000101616 P3h3Q8CG70 732 aa11.52□□□□□ -0.56
Smarca1-203ENSMUST00000101616 ArxO35085 564 aa11.52□□□□□ -0.57
Smarca1-203ENSMUST00000101616 Anp32bQ9EST5 272 aaKnown RBP11.51□□□□□ -0.57
Smarca1-203ENSMUST00000101616 Clip1Q922J3 1391 aa11.5□□□□□ -0.57
Smarca1-203ENSMUST00000101616 Mrs2Q5NCE8 434 aa11.47□□□□□ -0.57
Smarca1-203ENSMUST00000101616 Zbtb7cQ8VCZ7 619 aa11.43□□□□□ -0.58
Smarca1-203ENSMUST00000101616 4930567H17RikQ3V0K5 233 aa11.42□□□□□ -0.58
Smarca1-203ENSMUST00000101616 PrkcshO08795 521 aa11.41□□□□□ -0.58
Smarca1-203ENSMUST00000101616 Slc4a3P16283 1227 aa11.38□□□□□ -0.59
Smarca1-203ENSMUST00000101616 Crybg2B7ZCC2 1516 aa11.37□□□□□ -0.59
Smarca1-203ENSMUST00000101616 Hsp90aa1P07901 733 aaKnown RBP11.37□□□□□ -0.59
Smarca1-203ENSMUST00000101616 Ifnlr1Q8CGK5 535 aa11.35□□□□□ -0.59
Smarca1-203ENSMUST00000101616 Rad21Q61550 635 aaKnown RBP11.34□□□□□ -0.59
Smarca1-203ENSMUST00000101616 Rsf1E9PWW9 1441 aaKnown RBP11.34□□□□□ -0.59
Smarca1-203ENSMUST00000101616 Os9Q8K2C7 672 aa11.33□□□□□ -0.6
Smarca1-203ENSMUST00000101616 Prdm10Q3UTQ7 1184 aa11.33□□□□□ -0.6
Smarca1-203ENSMUST00000101616 Kdm5dQ62240 1548 aa11.32□□□□□ -0.6
Smarca1-203ENSMUST00000101616 Chic2Q9D9G3 165 aa11.31□□□□□ -0.6
Smarca1-203ENSMUST00000101616 Supt16hQ920B9 1047 aa11.31□□□□□ -0.6
Smarca1-203ENSMUST00000101616 Ccdc27Q3V036 639 aa11.3□□□□□ -0.6
Smarca1-203ENSMUST00000101616 Nolc1E9Q5C9 702 aaKnown RBP11.29□□□□□ -0.6
Smarca1-203ENSMUST00000101616 CanxP35564 591 aaKnown RBP11.26□□□□□ -0.61
Smarca1-203ENSMUST00000101616 Polr3glQ8R0C0 218 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 156.5 ms