RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 Grwd1Q810D6 446 aaKnown RBP8.66□□□□□ -1.02
Scn3a-202ENSMUST00000100069 EspnQ9ET47 871 aa8.66□□□□□ -1.02
Scn3a-202ENSMUST00000100069 Erich6bQ9D4S6 220 aa8.66□□□□□ -1.02
Scn3a-202ENSMUST00000100069 Rrp7aQ9D1C9 280 aaKnown RBP8.65□□□□□ -1.02
Scn3a-202ENSMUST00000100069 Arhgap27A2AB59 869 aa8.65□□□□□ -1.02
Scn3a-202ENSMUST00000100069 Spag9Q58A65 1321 aaKnown RBP8.65□□□□□ -1.02
Scn3a-202ENSMUST00000100069 Map7d2A2AG50 781 aa8.65□□□□□ -1.02
Scn3a-202ENSMUST00000100069 Rassf8Q8CJ96 419 aa8.65□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Stard8Q8K031 1019 aa8.65□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Neurod2Q62414 383 aa8.64□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Fyco1Q8VDC1 1437 aa8.64□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Rock2P70336 1388 aa8.64□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Cspp1B2RX88 1205 aa8.64□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Dnai1Q8C0M8 701 aa8.64□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Ccdc47Q9D024 483 aaKnown RBP8.63□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Rrp12Q6P5B0 1295 aaKnown RBP8.63□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Glipr1l2Q9CQ35 332 aa8.63□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Dhx57Q6P5D3 1388 aaKnown RBP8.63□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Clstn1Q9EPL2 979 aa8.63□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Iffo2Q8R2V2 512 aa8.63□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Arhgap35Q91YM2 1499 aa8.62□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Apbb1Q9QXJ1 710 aa8.62□□□□□ -1.03
Scn3a-202ENSMUST00000100069 AampJ3QN89 436 aa8.62□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Dnttip2Q8R2M2 758 aaKnown RBP8.62□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Ddrgk1Q80WW9 315 aa8.61□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Cgnl1Q6AW69 1298 aa8.61□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Tpm3P21107 285 aaKnown RBP8.61□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Pcmtd1P59913 357 aa8.6□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Chmp5Q9D7S9 219 aa8.6□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Rtn4Q99P72 1162 aaKnown RBP8.6□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Fmn1Q05860 1466 aa8.6□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Stk24Q99KH8 431 aa8.6□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Aebp2Q9Z248 504 aaKnown RBP8.6□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Tpm4Q6IRU2 248 aa8.59□□□□□ -1.03
Scn3a-202ENSMUST00000100069 A0A1L1SQF0 893 aa8.59□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Rab11fip3Q8CHD8 1047 aa8.59□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Kif27Q7M6Z4 1394 aa8.59□□□□□ -1.03
Scn3a-202ENSMUST00000100069 MecomP14404 1042 aa8.59□□□□□ -1.03
Scn3a-202ENSMUST00000100069 1700019A02RikA0A087WPV9 146 aa8.59□□□□□ -1.03
Scn3a-202ENSMUST00000100069 Gtf2e1Q9D0D5 440 aa8.59□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Ipo8Q7TMY7 1010 aa8.58□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Gtf3c5Q8R2T8 520 aa8.58□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Ipo9Q91YE6 1041 aa8.58□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Tpm2P58774 284 aa8.58□□□□□ -1.04
Scn3a-202ENSMUST00000100069 NgefQ8CHT1 710 aa8.58□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Zscan21Q07231 555 aa8.58□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Becn1O88597 448 aa8.57□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Tpm1P58771 284 aa8.57□□□□□ -1.04
Scn3a-202ENSMUST00000100069 MyclP10166 368 aa8.56□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Ddx11Q6AXC6 880 aa8.56□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Pds5bQ4VA53 1446 aaKnown RBP8.56□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Q3TQI7 289 aaKnown RBP8.55□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Zrsr2Q62377 462 aaKnown RBP8.55□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Golga2Q921M4 999 aa8.55□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Tpd52l1O54818 204 aa8.55□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Ccar1Q8CH18 1146 aaKnown RBP8.55□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Srek1Q8BZX4 494 aaKnown RBP8.55□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Plekhh2Q8C115 1491 aa8.55□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Map4P27546 1125 aaKnown RBP8.55□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Ftsj3Q9DBE9 838 aaKnown RBP8.55□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Rsph3aQ3UFY4 516 aa8.54□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Evc2Q8K1G2 1220 aa8.54□□□□□ -1.04
Scn3a-202ENSMUST00000100069 CntlnA2AM05 1397 aa8.54□□□□□ -1.04
Scn3a-202ENSMUST00000100069 B4galnt3Q6L8S8 986 aa8.54□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Noc3lQ8VI84 807 aaKnown RBP8.54□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Dbr1Q923B1 550 aa8.54□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Trim30aP15533 496 aa8.53□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Ylpm1Q9R0I7 1386 aaKnown RBP8.53□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Dusp9Q7TNL7 452 aa8.53□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Armcx1Q9CX83 456 aa8.53□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Speer4f1Q9D5Q6 258 aa8.53□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Ccdc34Q3UI66 367 aa8.53□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Ipo7Q9EPL8 1038 aaKnown RBP8.53□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Rundc1Q0VDN7 615 aa8.53□□□□□ -1.04
Scn3a-202ENSMUST00000100069 Kiaa0754Q69ZZ9 979 aa8.53□□□□□ -1.04
Scn3a-202ENSMUST00000100069 CgnP59242 1191 aa8.52□□□□□ -1.04
Scn3a-202ENSMUST00000100069 VgfQ0VGU4 617 aa8.52□□□□□ -1.04
Scn3a-202ENSMUST00000100069 St18Q80TY4 1045 aa8.52□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Ush1cQ9ES64 910 aa8.52□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Ccer1Q9CQL2 403 aa8.52□□□□□ -1.05
Scn3a-202ENSMUST00000100069 U2surpQ6NV83 1029 aaKnown RBP8.52□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Hook1Q8BIL5 728 aa8.52□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Pkd2O35245 966 aa8.51□□□□□ -1.05
Scn3a-202ENSMUST00000100069 U2af1Q9D883 239 aaKnown RBP8.51□□□□□ -1.05
Scn3a-202ENSMUST00000100069 CenpjQ569L8 1344 aa8.51□□□□□ -1.05
Scn3a-202ENSMUST00000100069 UacaQ8CGB3 1411 aa8.51□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Taok2Q6ZQ29 1240 aa8.51□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Supt16hQ920B9 1047 aa8.5□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Lemd3Q9WU40 921 aa8.5□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Odf2A3KGV1 830 aaKnown RBP8.5□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Baz1bQ9Z277 1479 aa8.5□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Kif3aP28741 701 aa8.49□□□□□ -1.05
Scn3a-202ENSMUST00000100069 SafbD3YXK2 937 aaKnown RBP8.49□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Smc4Q8CG47 1286 aa8.49□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Spryd3E9Q9B3 442 aa8.49□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Cplx2P84086 134 aa8.49□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Kdm5dQ62240 1548 aa8.49□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Gprasp1Q5U4C1 1347 aa8.49□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Psme1P97371 249 aa8.49□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Gtf3c3Q3TMP1 882 aa8.49□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms