Protein–RNA interactions for Protein: A0A1L1SQF0

Uncharacterized protein (Fragment), mousemouse

Predictions only

Length 893 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1L1SQF0 Gm25239-201ENSMUST00000174915 86 ntBASIC39.65■■■■□ 3.94
A0A1L1SQF0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
A0A1L1SQF0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
A0A1L1SQF0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.42■■■■□ 3.58
A0A1L1SQF0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
A0A1L1SQF0 Psd-208ENSMUST00000224556 2034 ntBASIC36.06■■■■□ 3.36
A0A1L1SQF0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
A0A1L1SQF0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
A0A1L1SQF0 Gm15042-201ENSMUST00000120212 883 ntBASIC35.6■■■■□ 3.29
A0A1L1SQF0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.3■■■■□ 3.24
A0A1L1SQF0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
A0A1L1SQF0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
A0A1L1SQF0 Gm15045-201ENSMUST00000117359 883 ntBASIC34.9■■■■□ 3.18
A0A1L1SQF0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.86■■■■□ 3.17
A0A1L1SQF0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
A0A1L1SQF0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.14
A0A1L1SQF0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
A0A1L1SQF0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
A0A1L1SQF0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.34■■■■□ 3.09
A0A1L1SQF0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
A0A1L1SQF0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
A0A1L1SQF0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.95■■■■□ 3.02
A0A1L1SQF0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
A0A1L1SQF0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.91■■■■□ 3.02
A0A1L1SQF0 Gm24109-201ENSMUST00000175489 103 ntBASIC33.9■■■■□ 3.02
A0A1L1SQF0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
A0A1L1SQF0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.87■■■■□ 3.01
A0A1L1SQF0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.83■■■■□ 3.01
A0A1L1SQF0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.67■■■□□ 2.98
A0A1L1SQF0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
A0A1L1SQF0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.61■■■□□ 2.97
A0A1L1SQF0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
A0A1L1SQF0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
A0A1L1SQF0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.43■■■□□ 2.94
A0A1L1SQF0 Gm23366-201ENSMUST00000175022 89 ntBASIC33.33■■■□□ 2.93
A0A1L1SQF0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
A0A1L1SQF0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.9
A0A1L1SQF0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
A0A1L1SQF0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.16■■■□□ 2.9
A0A1L1SQF0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
A0A1L1SQF0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.12■■■□□ 2.89
A0A1L1SQF0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
A0A1L1SQF0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
A0A1L1SQF0 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.05■■■□□ 2.88
A0A1L1SQF0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
A0A1L1SQF0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.96■■■□□ 2.87
A0A1L1SQF0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
A0A1L1SQF0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
A0A1L1SQF0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.7■■■□□ 2.83
A0A1L1SQF0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.68■■■□□ 2.82
A0A1L1SQF0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
A0A1L1SQF0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
A0A1L1SQF0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
A0A1L1SQF0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.17■■■□□ 2.74
A0A1L1SQF0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.15■■■□□ 2.74
A0A1L1SQF0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
A0A1L1SQF0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
A0A1L1SQF0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
A0A1L1SQF0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
A0A1L1SQF0 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.92■■■□□ 2.7
A0A1L1SQF0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
A0A1L1SQF0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
A0A1L1SQF0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
A0A1L1SQF0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
A0A1L1SQF0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
A0A1L1SQF0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
A0A1L1SQF0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.77■■■□□ 2.68
A0A1L1SQF0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
A0A1L1SQF0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
A0A1L1SQF0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
A0A1L1SQF0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
A0A1L1SQF0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
A0A1L1SQF0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
A0A1L1SQF0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
A0A1L1SQF0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
A0A1L1SQF0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.52■■■□□ 2.64
A0A1L1SQF0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
A0A1L1SQF0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
A0A1L1SQF0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
A0A1L1SQF0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
A0A1L1SQF0 Gm27325-201ENSMUST00000175467 74 ntBASIC31.35■■■□□ 2.61
A0A1L1SQF0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
A0A1L1SQF0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
A0A1L1SQF0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
A0A1L1SQF0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
A0A1L1SQF0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.24■■■□□ 2.59
A0A1L1SQF0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
A0A1L1SQF0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
A0A1L1SQF0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
A0A1L1SQF0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
A0A1L1SQF0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
A0A1L1SQF0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
A0A1L1SQF0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
A0A1L1SQF0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
A0A1L1SQF0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
A0A1L1SQF0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
A0A1L1SQF0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
A0A1L1SQF0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
A0A1L1SQF0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.98■■■□□ 2.55
A0A1L1SQF0 Gm25238-201ENSMUST00000174914 89 ntBASIC30.97■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms