RNA–Protein interactions for RNA: ENSMUST00000081339.12

Rrp1b-201, Transcript of Ribosomal RNA processing protein 1 homolog B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rrp1b, Length 4,874 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1b-201ENSMUST00000081339 Plekhh2Q8C115 1491 aa18.69■□□□□ 0.58
Rrp1b-201ENSMUST00000081339 Ifit1bl1D3Z6F0 470 aa18.69■□□□□ 0.58
Rrp1b-201ENSMUST00000081339 NrkQ9R0G8 1455 aa18.69■□□□□ 0.58
Rrp1b-201ENSMUST00000081339 Plb1Q3TTY0 1478 aa18.68■□□□□ 0.58
Rrp1b-201ENSMUST00000081339 Nup155Q99P88 1391 aaKnown RBP18.67■□□□□ 0.58
Rrp1b-201ENSMUST00000081339 Cnga1P29974 684 aa18.67■□□□□ 0.58
Rrp1b-201ENSMUST00000081339 Wwc2Q6NXJ0 1187 aa18.67■□□□□ 0.58
Rrp1b-201ENSMUST00000081339 PtprkP35822 1457 aa18.67■□□□□ 0.58
Rrp1b-201ENSMUST00000081339 Tdrd9Q14BI7 1383 aa18.67■□□□□ 0.58
Rrp1b-201ENSMUST00000081339 Trim30dE9PWL0 497 aa18.65■□□□□ 0.58
Rrp1b-201ENSMUST00000081339 Stk26Q99JT2 416 aa18.65■□□□□ 0.58
Rrp1b-201ENSMUST00000081339 Rundc1Q0VDN7 615 aa18.64■□□□□ 0.57
Rrp1b-201ENSMUST00000081339 Arid4bA2CG63 1314 aaKnown RBP18.64■□□□□ 0.57
Rrp1b-201ENSMUST00000081339 Cc2d2bA0A286YDU8 1405 aa18.63■□□□□ 0.57
Rrp1b-201ENSMUST00000081339 Hsp90ab1P11499 724 aaKnown RBP18.61■□□□□ 0.57
Rrp1b-201ENSMUST00000081339 Fgd6Q69ZL1 1399 aa18.6■□□□□ 0.57
Rrp1b-201ENSMUST00000081339 Sin3aQ60520 1274 aaKnown RBP18.6■□□□□ 0.57
Rrp1b-201ENSMUST00000081339 Bcl11aQ9QYE3 773 aa18.59■□□□□ 0.57
Rrp1b-201ENSMUST00000081339 Txndc2Q6P902 515 aa18.58■□□□□ 0.57
Rrp1b-201ENSMUST00000081339 Trim26Q99PN3 545 aa18.56■□□□□ 0.56
Rrp1b-201ENSMUST00000081339 Tcerg1Q8CGF7 1100 aaKnown RBP18.55■□□□□ 0.56
Rrp1b-201ENSMUST00000081339 Ncoa2Q61026 1462 aa18.55■□□□□ 0.56
Rrp1b-201ENSMUST00000081339 Psme1P97371 249 aa18.54■□□□□ 0.56
Rrp1b-201ENSMUST00000081339 Mroh2bQ7M6Y6 1581 aa18.54■□□□□ 0.56
Rrp1b-201ENSMUST00000081339 Gm7298A0A0N4SVU1 1476 aa18.54■□□□□ 0.56
Rrp1b-201ENSMUST00000081339 Arhgap31A6X8Z5 1425 aa18.53■□□□□ 0.56
Rrp1b-201ENSMUST00000081339 Ppm1gQ61074 542 aa18.53■□□□□ 0.56
Rrp1b-201ENSMUST00000081339 Spag9Q58A65 1321 aaKnown RBP18.53■□□□□ 0.56
Rrp1b-201ENSMUST00000081339 Supt16hQ920B9 1047 aa18.52■□□□□ 0.56
Rrp1b-201ENSMUST00000081339 Gtf2e1Q9D0D5 440 aa18.52■□□□□ 0.56
Rrp1b-201ENSMUST00000081339 Camsap1A2AHC3 1581 aa18.52■□□□□ 0.56
Rrp1b-201ENSMUST00000081339 UacaQ8CGB3 1411 aa18.52■□□□□ 0.56
Rrp1b-201ENSMUST00000081339 Ift140E9PY46 1464 aa18.52■□□□□ 0.55
Rrp1b-201ENSMUST00000081339 Irx6Q9ER75 438 aa18.51■□□□□ 0.55
Rrp1b-201ENSMUST00000081339 Polr1aO35134 1717 aaKnown RBP18.51■□□□□ 0.55
Rrp1b-201ENSMUST00000081339 Slc4a3P16283 1227 aa18.51■□□□□ 0.55
Rrp1b-201ENSMUST00000081339 Exoc6Q8R313 802 aa18.51■□□□□ 0.55
Rrp1b-201ENSMUST00000081339 Apbb1Q9QXJ1 710 aa18.5■□□□□ 0.55
Rrp1b-201ENSMUST00000081339 Htatsf1Q8BGC0 757 aa18.49■□□□□ 0.55
Rrp1b-201ENSMUST00000081339 Top2bQ64511 1612 aa18.48■□□□□ 0.55
Rrp1b-201ENSMUST00000081339 DekQ7TNV0 380 aaKnown RBP18.47■□□□□ 0.55
Rrp1b-201ENSMUST00000081339 EprsQ8CGC7 1512 aaKnown RBP18.47■□□□□ 0.55
Rrp1b-201ENSMUST00000081339 Lamc3Q9R0B6 1581 aa18.46■□□□□ 0.55
Rrp1b-201ENSMUST00000081339 Naip1Q9QWK5 1403 aa18.45■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 CadpsQ80TJ1 1355 aa18.45■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 Neurod2Q62414 383 aa18.44■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 Rsph4aQ8BYM7 716 aa18.44■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 Fan1Q69ZT1 1020 aa18.44■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 Gm14025A2AP89 1413 aa18.43■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 Mbd3Q9Z2D8 285 aaKnown RBP18.43■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 Map3k1P53349 1493 aa18.43■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 Crocc2F6XLV1 1638 aa18.42■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 Trim44Q9QXA7 346 aa18.42■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 Srcin1Q9QWI6 1250 aa18.41■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 Znf316Q6PGE4 1016 aa18.41■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 Dbr1Q923B1 550 aa18.41■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 Arap1Q4LDD4 1452 aa18.4■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 B4galnt3Q6L8S8 986 aa18.4■□□□□ 0.54
Rrp1b-201ENSMUST00000081339 Sox12Q04890 314 aa18.38■□□□□ 0.53
Rrp1b-201ENSMUST00000081339 Rwdd1Q9CQK7 243 aa18.38■□□□□ 0.53
Rrp1b-201ENSMUST00000081339 Zfp644E9QA22 1323 aa18.38■□□□□ 0.53
Rrp1b-201ENSMUST00000081339 Irx3P81067 507 aa18.38■□□□□ 0.53
Rrp1b-201ENSMUST00000081339 Usp47Q8BY87 1376 aa18.38■□□□□ 0.53
Rrp1b-201ENSMUST00000081339 Fgd1P52734 960 aa18.38■□□□□ 0.53
Rrp1b-201ENSMUST00000081339 Zscan21Q07231 555 aa18.37■□□□□ 0.53
Rrp1b-201ENSMUST00000081339 Ecm2Q5FW85 670 aa18.37■□□□□ 0.53
Rrp1b-201ENSMUST00000081339 Mapk8ip3Q9ESN9 1337 aa18.36■□□□□ 0.53
Rrp1b-201ENSMUST00000081339 Vsig10D3YX43 558 aa18.36■□□□□ 0.53
Rrp1b-201ENSMUST00000081339 Utp14aQ640M1 767 aaKnown RBP18.36■□□□□ 0.53
Rrp1b-201ENSMUST00000081339 Map3k5O35099 1380 aa18.36■□□□□ 0.53
Rrp1b-201ENSMUST00000081339 Fhad1A6PWD2 1420 aa18.35■□□□□ 0.53
Rrp1b-201ENSMUST00000081339 Chmp5Q9D7S9 219 aa18.34■□□□□ 0.53
Rrp1b-201ENSMUST00000081339 Mak16Q8BGS0 296 aaKnown RBP18.33■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Cux1P53564 1515 aa18.33■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Nolc1E9Q5C9 702 aaKnown RBP18.33■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Rock2P70336 1388 aa18.32■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Smg6P61406 1418 aaKnown RBP18.32■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Pde4cQ3UEI1 686 aa18.32■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Ipo9Q91YE6 1041 aa18.32■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Tmf1B9EKI3 1091 aa18.31■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Fam163aQ8CAA5 168 aa18.31■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Arhgef5E9Q7D5 1581 aa18.31■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Dcaf11Q91VU6 549 aa18.3■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Plcb2A3KGF7 1181 aa18.3■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Grin2aP35436 1464 aa18.3■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Neo1P97798 1493 aa18.3■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Arhgap5P97393 1501 aa18.29■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Plin1Q8CGN5 517 aa18.29■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Prdm16A2A935 1275 aa18.28■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Shq1Q7TMX5 569 aa18.28■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Birc3O08863 600 aa18.28■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 1700019A02RikA0A087WPV9 146 aa18.27■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 SynmQ70IV5 1561 aa18.27■□□□□ 0.52
Rrp1b-201ENSMUST00000081339 Slc4a1apE9PX68 744 aa18.27■□□□□ 0.51
Rrp1b-201ENSMUST00000081339 Ccdc141E9Q8Q6 1531 aa18.26■□□□□ 0.51
Rrp1b-201ENSMUST00000081339 Dnai1Q8C0M8 701 aa18.26■□□□□ 0.51
Rrp1b-201ENSMUST00000081339 Map7O88735 730 aa18.25■□□□□ 0.51
Rrp1b-201ENSMUST00000081339 EspnQ9ET47 871 aa18.24■□□□□ 0.51
Rrp1b-201ENSMUST00000081339 Gm6268A2A3U9 297 aa18.23■□□□□ 0.51
Rrp1b-201ENSMUST00000081339 Iqcf3Q9D498 203 aa18.22■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 49.6 ms