RNA–Protein interactions for RNA: ENSMUST00000067005.10

Syne3-201, Transcript of Nesprin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syne3, Length 5,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-201ENSMUST00000067005 Zscan21Q07231 555 aa18.99■□□□□ 0.63
Syne3-201ENSMUST00000067005 Dhx29Q6PGC1 1365 aaKnown RBP18.98■□□□□ 0.63
Syne3-201ENSMUST00000067005 Stard8Q8K031 1019 aa18.98■□□□□ 0.63
Syne3-201ENSMUST00000067005 Gm6268A2A3U9 297 aa18.97■□□□□ 0.63
Syne3-201ENSMUST00000067005 Cnga1P29974 684 aa18.97■□□□□ 0.63
Syne3-201ENSMUST00000067005 Rock2P70336 1388 aa18.96■□□□□ 0.63
Syne3-201ENSMUST00000067005 Iqgap2Q3UQ44 1575 aa18.96■□□□□ 0.63
Syne3-201ENSMUST00000067005 Irx6Q9ER75 438 aa18.95■□□□□ 0.62
Syne3-201ENSMUST00000067005 Exoc6Q8R313 802 aa18.95■□□□□ 0.62
Syne3-201ENSMUST00000067005 Fam71e1A1L3C1 212 aa18.94■□□□□ 0.62
Syne3-201ENSMUST00000067005 NgefQ8CHT1 710 aa18.94■□□□□ 0.62
Syne3-201ENSMUST00000067005 MyclP10166 368 aa18.94■□□□□ 0.62
Syne3-201ENSMUST00000067005 Sin3aQ60520 1274 aaKnown RBP18.94■□□□□ 0.62
Syne3-201ENSMUST00000067005 Mak16Q8BGS0 296 aaKnown RBP18.94■□□□□ 0.62
Syne3-201ENSMUST00000067005 Trim44Q9QXA7 346 aa18.92■□□□□ 0.62
Syne3-201ENSMUST00000067005 Srcin1Q9QWI6 1250 aa18.91■□□□□ 0.62
Syne3-201ENSMUST00000067005 Kif3bQ61771 747 aa18.9■□□□□ 0.62
Syne3-201ENSMUST00000067005 Sart1Q9Z315 806 aaKnown RBP18.89■□□□□ 0.61
Syne3-201ENSMUST00000067005 Ccdc27Q3V036 639 aa18.89■□□□□ 0.61
Syne3-201ENSMUST00000067005 Tcerg1Q8CGF7 1100 aaKnown RBP18.89■□□□□ 0.61
Syne3-201ENSMUST00000067005 HnrnpuQ8VEK3 800 aaKnown RBP18.89■□□□□ 0.61
Syne3-201ENSMUST00000067005 KnstrnQ9D9Z1 312 aaKnown RBP18.89■□□□□ 0.61
Syne3-201ENSMUST00000067005 Speer4f1Q9D5Q6 258 aa18.88■□□□□ 0.61
Syne3-201ENSMUST00000067005 Efcab5A0JP43 1406 aa18.86■□□□□ 0.61
Syne3-201ENSMUST00000067005 WrnO09053 1401 aa18.83■□□□□ 0.61
Syne3-201ENSMUST00000067005 Stk26Q99JT2 416 aa18.83■□□□□ 0.61
Syne3-201ENSMUST00000067005 1700019A02RikA0A087WPV9 146 aa18.82■□□□□ 0.6
Syne3-201ENSMUST00000067005 Vsig10D3YX43 558 aa18.82■□□□□ 0.6
Syne3-201ENSMUST00000067005 Golga2Q921M4 999 aa18.82■□□□□ 0.6
Syne3-201ENSMUST00000067005 Rtf1A2AQ19 715 aaKnown RBP18.82■□□□□ 0.6
Syne3-201ENSMUST00000067005 Dcaf11Q91VU6 549 aa18.82■□□□□ 0.6
Syne3-201ENSMUST00000067005 Ncoa2Q61026 1462 aa18.81■□□□□ 0.6
Syne3-201ENSMUST00000067005 U2af1Q9D883 239 aaKnown RBP18.81■□□□□ 0.6
Syne3-201ENSMUST00000067005 Plcb2A3KGF7 1181 aa18.8■□□□□ 0.6
Syne3-201ENSMUST00000067005 Shroom4Q1W617 1475 aa18.8■□□□□ 0.6
Syne3-201ENSMUST00000067005 Dbr1Q923B1 550 aa18.79■□□□□ 0.6
Syne3-201ENSMUST00000067005 Usp47Q8BY87 1376 aa18.79■□□□□ 0.6
Syne3-201ENSMUST00000067005 Chmp5Q9D7S9 219 aa18.78■□□□□ 0.6
Syne3-201ENSMUST00000067005 Cux1P53564 1515 aa18.78■□□□□ 0.6
Syne3-201ENSMUST00000067005 Psme1P97371 249 aa18.78■□□□□ 0.6
Syne3-201ENSMUST00000067005 Polr1aO35134 1717 aaKnown RBP18.78■□□□□ 0.6
Syne3-201ENSMUST00000067005 PtmaP26350 111 aa18.77■□□□□ 0.6
Syne3-201ENSMUST00000067005 B4galnt3Q6L8S8 986 aa18.76■□□□□ 0.59
Syne3-201ENSMUST00000067005 CenpjQ569L8 1344 aa18.75■□□□□ 0.59
Syne3-201ENSMUST00000067005 Sart3Q9JLI8 962 aaKnown RBP18.75■□□□□ 0.59
Syne3-201ENSMUST00000067005 MccE9PWI3 1003 aa18.74■□□□□ 0.59
Syne3-201ENSMUST00000067005 Txndc2Q6P902 515 aa18.74■□□□□ 0.59
Syne3-201ENSMUST00000067005 Jph4Q80WT0 628 aa18.74■□□□□ 0.59
Syne3-201ENSMUST00000067005 Supt16hQ920B9 1047 aa18.74■□□□□ 0.59
Syne3-201ENSMUST00000067005 Znf326O88291 580 aa18.74■□□□□ 0.59
Syne3-201ENSMUST00000067005 Pde3bQ61409 1100 aa18.74■□□□□ 0.59
Syne3-201ENSMUST00000067005 EspnQ9ET47 871 aa18.74■□□□□ 0.59
Syne3-201ENSMUST00000067005 Ankrd36D3Z4K0 1415 aa18.74■□□□□ 0.59
Syne3-201ENSMUST00000067005 Armcx1Q9CX83 456 aa18.73■□□□□ 0.59
Syne3-201ENSMUST00000067005 Top2aQ01320 1528 aaKnown RBP18.73■□□□□ 0.59
Syne3-201ENSMUST00000067005 Hsp90b1P08113 802 aaKnown RBP18.73■□□□□ 0.59
Syne3-201ENSMUST00000067005 SafbD3YXK2 937 aaKnown RBP18.72■□□□□ 0.59
Syne3-201ENSMUST00000067005 Spag9Q58A65 1321 aaKnown RBP18.72■□□□□ 0.59
Syne3-201ENSMUST00000067005 Slc4a1apE9PX68 744 aa18.72■□□□□ 0.59
Syne3-201ENSMUST00000067005 Cc2d2bA0A286YDU8 1405 aa18.72■□□□□ 0.59
Syne3-201ENSMUST00000067005 Smg6P61406 1418 aaKnown RBP18.7■□□□□ 0.58
Syne3-201ENSMUST00000067005 PtmsQ9D0J8 101 aaKnown RBP18.69■□□□□ 0.58
Syne3-201ENSMUST00000067005 Eif4g2Q62448 906 aaKnown RBP18.69■□□□□ 0.58
Syne3-201ENSMUST00000067005 NrkQ9R0G8 1455 aa18.69■□□□□ 0.58
Syne3-201ENSMUST00000067005 U2surpQ6NV83 1029 aaKnown RBP18.68■□□□□ 0.58
Syne3-201ENSMUST00000067005 Pes1Q9EQ61 584 aaKnown RBP18.68■□□□□ 0.58
Syne3-201ENSMUST00000067005 Birc3O08863 600 aa18.68■□□□□ 0.58
Syne3-201ENSMUST00000067005 Fan1Q69ZT1 1020 aa18.68■□□□□ 0.58
Syne3-201ENSMUST00000067005 Soga1E1U8D0 1418 aa18.68■□□□□ 0.58
Syne3-201ENSMUST00000067005 Ccar1Q8CH18 1146 aaKnown RBP18.65■□□□□ 0.58
Syne3-201ENSMUST00000067005 CatipB9EKE5 520 aa18.65■□□□□ 0.58
Syne3-201ENSMUST00000067005 HdgfP51859 237 aaKnown RBP18.65■□□□□ 0.58
Syne3-201ENSMUST00000067005 Casc1Q6TDU8 730 aa18.65■□□□□ 0.58
Syne3-201ENSMUST00000067005 Tdrd9Q14BI7 1383 aa18.64■□□□□ 0.58
Syne3-201ENSMUST00000067005 Slc4a3P16283 1227 aa18.63■□□□□ 0.57
Syne3-201ENSMUST00000067005 Tmco5bQ80X59 307 aa18.63■□□□□ 0.57
Syne3-201ENSMUST00000067005 Nsd2Q8BVE8 1365 aa18.63■□□□□ 0.57
Syne3-201ENSMUST00000067005 Utp14aQ640M1 767 aaKnown RBP18.63■□□□□ 0.57
Syne3-201ENSMUST00000067005 Q3TQI7 289 aaKnown RBP18.62■□□□□ 0.57
Syne3-201ENSMUST00000067005 Pank3Q8R2W9 370 aa18.62■□□□□ 0.57
Syne3-201ENSMUST00000067005 Vps8Q0P5W1 1427 aa18.62■□□□□ 0.57
Syne3-201ENSMUST00000067005 Dnai1Q8C0M8 701 aa18.62■□□□□ 0.57
Syne3-201ENSMUST00000067005 Rtn4Q99P72 1162 aaKnown RBP18.61■□□□□ 0.57
Syne3-201ENSMUST00000067005 Map3k1P53349 1493 aa18.61■□□□□ 0.57
Syne3-201ENSMUST00000067005 Pabpn1Q8CCS6 302 aaKnown RBP18.61■□□□□ 0.57
Syne3-201ENSMUST00000067005 PnnO35691 725 aaKnown RBP18.6■□□□□ 0.57
Syne3-201ENSMUST00000067005 Prdm16A2A935 1275 aa18.59■□□□□ 0.57
Syne3-201ENSMUST00000067005 Dapk1Q80YE7 1442 aa18.59■□□□□ 0.57
Syne3-201ENSMUST00000067005 CrbnQ8C7D2 445 aa18.59■□□□□ 0.57
Syne3-201ENSMUST00000067005 Cc2d2aQ8CFW7 1633 aa18.58■□□□□ 0.56
Syne3-201ENSMUST00000067005 Fam184bQ0KK56 942 aa18.58■□□□□ 0.56
Syne3-201ENSMUST00000067005 Ksr2Q3UVC0 959 aa18.58■□□□□ 0.56
Syne3-201ENSMUST00000067005 Duox2A2AQ99 1517 aa18.57■□□□□ 0.56
Syne3-201ENSMUST00000067005 Rock1P70335 1354 aa18.57■□□□□ 0.56
Syne3-201ENSMUST00000067005 Ipo8Q7TMY7 1010 aa18.56■□□□□ 0.56
Syne3-201ENSMUST00000067005 Usp40Q8BWR4 1235 aa18.56■□□□□ 0.56
Syne3-201ENSMUST00000067005 Plin1Q8CGN5 517 aa18.56■□□□□ 0.56
Syne3-201ENSMUST00000067005 Naip1Q9QWK5 1403 aa18.55■□□□□ 0.56
Syne3-201ENSMUST00000067005 Ift140E9PY46 1464 aa18.54■□□□□ 0.56
Syne3-201ENSMUST00000067005 Tsen2Q6P7W5 460 aa18.54■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms