RNA–Protein interactions for RNA: ENSMUST00000067005.10

Syne3-201, Transcript of Nesprin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syne3, Length 5,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-201ENSMUST00000067005 Rhox8Q6VSS7 320 aa26.32■■□□□ 1.8
Syne3-201ENSMUST00000067005 Rpgrip1Q9EPQ2 1331 aa23.93■■□□□ 1.42
Syne3-201ENSMUST00000067005 NischQ80TM9 1593 aa23.83■■□□□ 1.41
Syne3-201ENSMUST00000067005 Ccdc136Q3TVA9 1136 aa23.41■■□□□ 1.34
Syne3-201ENSMUST00000067005 Esf1Q3V1V3 845 aaKnown RBP23.28■■□□□ 1.32
Syne3-201ENSMUST00000067005 Trim41Q5NCC3 630 aa23.24■■□□□ 1.31
Syne3-201ENSMUST00000067005 Cngb1E1AZ71 1325 aa23.17■■□□□ 1.3
Syne3-201ENSMUST00000067005 Ehmt2Q9Z148 1263 aaKnown RBP23.09■■□□□ 1.29
Syne3-201ENSMUST00000067005 Las1lA2BE28 776 aaKnown RBP22.77■■□□□ 1.24
Syne3-201ENSMUST00000067005 Gab3Q8BSM5 595 aa22.76■■□□□ 1.23
Syne3-201ENSMUST00000067005 Npm2Q80W85 207 aa22.69■■□□□ 1.22
Syne3-201ENSMUST00000067005 Zeb1Q64318 1117 aa22.67■■□□□ 1.22
Syne3-201ENSMUST00000067005 Wdr66E9Q743 1299 aa22.54■■□□□ 1.2
Syne3-201ENSMUST00000067005 Ube2uB1AUC4 352 aa22.48■■□□□ 1.19
Syne3-201ENSMUST00000067005 Myt1lP97500 1187 aa22.41■■□□□ 1.18
Syne3-201ENSMUST00000067005 Ccdc180J3QNE4 1664 aa22.4■■□□□ 1.18
Syne3-201ENSMUST00000067005 Abcc9P70170 1546 aa22.32■■□□□ 1.16
Syne3-201ENSMUST00000067005 HrcG5E8J6 738 aa22.31■■□□□ 1.16
Syne3-201ENSMUST00000067005 Rtl1Q7M732 1744 aa22.28■■□□□ 1.16
Syne3-201ENSMUST00000067005 Acin1Q9JIX8 1338 aaKnown RBP22.2■■□□□ 1.14
Syne3-201ENSMUST00000067005 NefmP08553 848 aa22.16■■□□□ 1.14
Syne3-201ENSMUST00000067005 Pelp1Q9DBD5 1123 aaKnown RBP22.01■■□□□ 1.11
Syne3-201ENSMUST00000067005 Zcchc6Q5BLK4 1491 aaKnown RBP21.98■■□□□ 1.11
Syne3-201ENSMUST00000067005 UbtfP25976 765 aaKnown RBP21.94■■□□□ 1.1
Syne3-201ENSMUST00000067005 Abcc8B2RUS7 1588 aa21.82■■□□□ 1.08
Syne3-201ENSMUST00000067005 Il27Q8K3I6 234 aa21.78■■□□□ 1.08
Syne3-201ENSMUST00000067005 Stra8P70278 393 aa21.73■■□□□ 1.07
Syne3-201ENSMUST00000067005 Gm35339A0A140LHH9 1649 aa21.6■■□□□ 1.05
Syne3-201ENSMUST00000067005 CenpbP27790 599 aa21.45■■□□□ 1.02
Syne3-201ENSMUST00000067005 Fam50aQ9WV03 339 aaKnown RBP21.32■■□□□ 1
Syne3-201ENSMUST00000067005 Ap3b1Q9Z1T1 1105 aa21.29■■□□□ 1
Syne3-201ENSMUST00000067005 Cdk11bP24788 784 aaKnown RBP21.27■■□□□ 1
Syne3-201ENSMUST00000067005 Slc24a1Q91WD8 1130 aa21.2■□□□□ 0.98
Syne3-201ENSMUST00000067005 Anp32bQ9EST5 272 aaKnown RBP21.2■□□□□ 0.98
Syne3-201ENSMUST00000067005 Npm1Q61937 292 aaKnown RBP21.18■□□□□ 0.98
Syne3-201ENSMUST00000067005 Pcgf6Q99NA9 353 aa21.17■□□□□ 0.98
Syne3-201ENSMUST00000067005 NclP09405 707 aaKnown RBP21.16■□□□□ 0.98
Syne3-201ENSMUST00000067005 Brd4Q9ESU6 1400 aaKnown RBP21.16■□□□□ 0.98
Syne3-201ENSMUST00000067005 NrdcQ8BHG1 1161 aa21.1■□□□□ 0.97
Syne3-201ENSMUST00000067005 TonslQ6NZL6 1363 aa21.09■□□□□ 0.97
Syne3-201ENSMUST00000067005 Tnnt3Q9QZ47 272 aa21.08■□□□□ 0.97
Syne3-201ENSMUST00000067005 Nop58Q6DFW4 536 aaKnown RBP21.04■□□□□ 0.96
Syne3-201ENSMUST00000067005 Neurod1Q60867 357 aa21■□□□□ 0.95
Syne3-201ENSMUST00000067005 Mier1Q5UAK0 511 aa20.99■□□□□ 0.95
Syne3-201ENSMUST00000067005 Rb1cc1Q9ESK9 1588 aa20.95■□□□□ 0.94
Syne3-201ENSMUST00000067005 Os9Q8K2C7 672 aa20.89■□□□□ 0.93
Syne3-201ENSMUST00000067005 Cep164Q5DU05 1446 aa20.89■□□□□ 0.93
Syne3-201ENSMUST00000067005 Dcaf1Q80TR8 1506 aa20.82■□□□□ 0.92
Syne3-201ENSMUST00000067005 Plekhg3Q4VAC9 1341 aa20.8■□□□□ 0.92
Syne3-201ENSMUST00000067005 NeflP08551 543 aa20.8■□□□□ 0.92
Syne3-201ENSMUST00000067005 Supt5hO55201 1082 aaKnown RBP20.8■□□□□ 0.92
Syne3-201ENSMUST00000067005 Lmod2Q3UHZ5 550 aa20.8■□□□□ 0.92
Syne3-201ENSMUST00000067005 NacadQ5SWP3 1504 aa20.76■□□□□ 0.91
Syne3-201ENSMUST00000067005 Clip1Q922J3 1391 aa20.68■□□□□ 0.9
Syne3-201ENSMUST00000067005 ClspnQ80YR7 1315 aa20.66■□□□□ 0.9
Syne3-201ENSMUST00000067005 Chic1Q8CBW7 227 aa20.66■□□□□ 0.9
Syne3-201ENSMUST00000067005 Ppargc1bQ8VHJ7 1014 aa20.65■□□□□ 0.9
Syne3-201ENSMUST00000067005 Myt1Q8CFC2 1127 aa20.63■□□□□ 0.89
Syne3-201ENSMUST00000067005 Eif5bQ05D44 1216 aaKnown RBP20.62■□□□□ 0.89
Syne3-201ENSMUST00000067005 Amer1Q7TS75 1132 aa20.6■□□□□ 0.89
Syne3-201ENSMUST00000067005 Ccer2J3QPU5 274 aa20.59■□□□□ 0.89
Syne3-201ENSMUST00000067005 Hdac5Q9Z2V6 1113 aa20.58■□□□□ 0.88
Syne3-201ENSMUST00000067005 Baz1aO88379 1555 aa20.55■□□□□ 0.88
Syne3-201ENSMUST00000067005 Ubl4bQ9CQ84 188 aa20.53■□□□□ 0.88
Syne3-201ENSMUST00000067005 Hnrnpul2Q00PI9 745 aaKnown RBP20.51■□□□□ 0.87
Syne3-201ENSMUST00000067005 Zbtb7cQ8VCZ7 619 aa20.46■□□□□ 0.87
Syne3-201ENSMUST00000067005 Rtl5Q5DTT4 599 aa20.38■□□□□ 0.85
Syne3-201ENSMUST00000067005 Golga3P55937 1487 aa20.36■□□□□ 0.85
Syne3-201ENSMUST00000067005 Gm13697A2AK42 830 aa20.33■□□□□ 0.85
Syne3-201ENSMUST00000067005 Eid3Q3V124 375 aa20.32■□□□□ 0.84
Syne3-201ENSMUST00000067005 4933416C03RikQ3V063 378 aa20.29■□□□□ 0.84
Syne3-201ENSMUST00000067005 Ifnlr1Q8CGK5 535 aa20.29■□□□□ 0.84
Syne3-201ENSMUST00000067005 Rsf1E9PWW9 1441 aaKnown RBP20.26■□□□□ 0.83
Syne3-201ENSMUST00000067005 Erich6D3Z6S9 713 aa20.25■□□□□ 0.83
Syne3-201ENSMUST00000067005 Fkbp15Q6P9Q6 1216 aaKnown RBP20.24■□□□□ 0.83
Syne3-201ENSMUST00000067005 BlmO88700 1416 aa20.23■□□□□ 0.83
Syne3-201ENSMUST00000067005 Setd5Q5XJV7 1441 aa20.2■□□□□ 0.82
Syne3-201ENSMUST00000067005 Clstn2Q9ER65 966 aa20.18■□□□□ 0.82
Syne3-201ENSMUST00000067005 Nlrp6Q91WS2 869 aa20.18■□□□□ 0.82
Syne3-201ENSMUST00000067005 Kdm5dQ62240 1548 aa20.17■□□□□ 0.82
Syne3-201ENSMUST00000067005 Kif15Q6P9L6 1387 aa20.16■□□□□ 0.82
Syne3-201ENSMUST00000067005 Sall2Q9QX96 1004 aa20.16■□□□□ 0.82
Syne3-201ENSMUST00000067005 Anp32aO35381 247 aa20.16■□□□□ 0.82
Syne3-201ENSMUST00000067005 Ercc6F8VPZ5 1481 aa20.14■□□□□ 0.81
Syne3-201ENSMUST00000067005 Atp1b4Q99ME6 356 aa20.13■□□□□ 0.81
Syne3-201ENSMUST00000067005 Ttbk1Q6PCN3 1308 aa20.13■□□□□ 0.81
Syne3-201ENSMUST00000067005 Ccdc18Q640L5 1455 aa20.1■□□□□ 0.81
Syne3-201ENSMUST00000067005 Zbtb4Q5F293 982 aa20.09■□□□□ 0.81
Syne3-201ENSMUST00000067005 Chic2Q9D9G3 165 aa20.06■□□□□ 0.8
Syne3-201ENSMUST00000067005 Anks4bQ8K3X6 423 aa20.03■□□□□ 0.8
Syne3-201ENSMUST00000067005 Mapk8ip2Q9ERE9 830 aa20.03■□□□□ 0.8
Syne3-201ENSMUST00000067005 Eea1Q8BL66 1411 aa20.02■□□□□ 0.8
Syne3-201ENSMUST00000067005 Gm13695A2AK44 830 aa20.01■□□□□ 0.79
Syne3-201ENSMUST00000067005 4930567H17RikQ3V0K5 233 aa19.99■□□□□ 0.79
Syne3-201ENSMUST00000067005 Upf2A2AT37 1269 aaKnown RBP19.97■□□□□ 0.79
Syne3-201ENSMUST00000067005 Pds5bQ4VA53 1446 aaKnown RBP19.87■□□□□ 0.77
Syne3-201ENSMUST00000067005 Prdm10Q3UTQ7 1184 aa19.86■□□□□ 0.77
Syne3-201ENSMUST00000067005 Polr3glQ8R0C0 218 aa19.83■□□□□ 0.77
Syne3-201ENSMUST00000067005 Mrs2Q5NCE8 434 aa19.82■□□□□ 0.76
Syne3-201ENSMUST00000067005 Crybg2B7ZCC2 1516 aa19.81■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms