RNA–Protein interactions for RNA: ENSMUST00000067005.10

Syne3-201, Transcript of Nesprin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syne3, Length 5,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-201ENSMUST00000067005 Rhox8Q6VSS7 320 aa26.32■■□□□ 1.8
Syne3-201ENSMUST00000067005 Rpgrip1Q9EPQ2 1331 aa23.93■■□□□ 1.42
Syne3-201ENSMUST00000067005 NischQ80TM9 1593 aa23.83■■□□□ 1.41
Syne3-201ENSMUST00000067005 Ccdc136Q3TVA9 1136 aa23.41■■□□□ 1.34
Syne3-201ENSMUST00000067005 Esf1Q3V1V3 845 aaKnown RBP23.28■■□□□ 1.32
Syne3-201ENSMUST00000067005 Trim41Q5NCC3 630 aa23.24■■□□□ 1.31
Syne3-201ENSMUST00000067005 Cngb1E1AZ71 1325 aa23.17■■□□□ 1.3
Syne3-201ENSMUST00000067005 Ehmt2Q9Z148 1263 aaKnown RBP23.09■■□□□ 1.29
Syne3-201ENSMUST00000067005 Las1lA2BE28 776 aaKnown RBP22.77■■□□□ 1.24
Syne3-201ENSMUST00000067005 Gab3Q8BSM5 595 aa22.76■■□□□ 1.23
Syne3-201ENSMUST00000067005 Npm2Q80W85 207 aa22.69■■□□□ 1.22
Syne3-201ENSMUST00000067005 Zeb1Q64318 1117 aa22.67■■□□□ 1.22
Syne3-201ENSMUST00000067005 Wdr66E9Q743 1299 aa22.54■■□□□ 1.2
Syne3-201ENSMUST00000067005 Ube2uB1AUC4 352 aa22.48■■□□□ 1.19
Syne3-201ENSMUST00000067005 Myt1lP97500 1187 aa22.41■■□□□ 1.18
Syne3-201ENSMUST00000067005 Ccdc180J3QNE4 1664 aa22.4■■□□□ 1.18
Syne3-201ENSMUST00000067005 Abcc9P70170 1546 aa22.32■■□□□ 1.16
Syne3-201ENSMUST00000067005 HrcG5E8J6 738 aa22.31■■□□□ 1.16
Syne3-201ENSMUST00000067005 Rtl1Q7M732 1744 aa22.28■■□□□ 1.16
Syne3-201ENSMUST00000067005 Acin1Q9JIX8 1338 aaKnown RBP22.2■■□□□ 1.14
Syne3-201ENSMUST00000067005 NefmP08553 848 aa22.16■■□□□ 1.14
Syne3-201ENSMUST00000067005 Pelp1Q9DBD5 1123 aaKnown RBP22.01■■□□□ 1.11
Syne3-201ENSMUST00000067005 Zcchc6Q5BLK4 1491 aaKnown RBP21.98■■□□□ 1.11
Syne3-201ENSMUST00000067005 UbtfP25976 765 aaKnown RBP21.94■■□□□ 1.1
Syne3-201ENSMUST00000067005 Abcc8B2RUS7 1588 aa21.82■■□□□ 1.08
Syne3-201ENSMUST00000067005 Il27Q8K3I6 234 aa21.78■■□□□ 1.08
Syne3-201ENSMUST00000067005 Stra8P70278 393 aa21.73■■□□□ 1.07
Syne3-201ENSMUST00000067005 Gm35339A0A140LHH9 1649 aa21.6■■□□□ 1.05
Syne3-201ENSMUST00000067005 CenpbP27790 599 aa21.45■■□□□ 1.02
Syne3-201ENSMUST00000067005 Fam50aQ9WV03 339 aaKnown RBP21.32■■□□□ 1
Syne3-201ENSMUST00000067005 Ap3b1Q9Z1T1 1105 aa21.29■■□□□ 1
Syne3-201ENSMUST00000067005 Cdk11bP24788 784 aaKnown RBP21.27■■□□□ 1
Syne3-201ENSMUST00000067005 Slc24a1Q91WD8 1130 aa21.2■□□□□ 0.98
Syne3-201ENSMUST00000067005 Anp32bQ9EST5 272 aaKnown RBP21.2■□□□□ 0.98
Syne3-201ENSMUST00000067005 Npm1Q61937 292 aaKnown RBP21.18■□□□□ 0.98
Syne3-201ENSMUST00000067005 Pcgf6Q99NA9 353 aa21.17■□□□□ 0.98
Syne3-201ENSMUST00000067005 NclP09405 707 aaKnown RBP21.16■□□□□ 0.98
Syne3-201ENSMUST00000067005 Brd4Q9ESU6 1400 aaKnown RBP21.16■□□□□ 0.98
Syne3-201ENSMUST00000067005 NrdcQ8BHG1 1161 aa21.1■□□□□ 0.97
Syne3-201ENSMUST00000067005 TonslQ6NZL6 1363 aa21.09■□□□□ 0.97
Syne3-201ENSMUST00000067005 Tnnt3Q9QZ47 272 aa21.08■□□□□ 0.97
Syne3-201ENSMUST00000067005 Nop58Q6DFW4 536 aaKnown RBP21.04■□□□□ 0.96
Syne3-201ENSMUST00000067005 Neurod1Q60867 357 aa21■□□□□ 0.95
Syne3-201ENSMUST00000067005 Mier1Q5UAK0 511 aa20.99■□□□□ 0.95
Syne3-201ENSMUST00000067005 Rb1cc1Q9ESK9 1588 aa20.95■□□□□ 0.94
Syne3-201ENSMUST00000067005 Os9Q8K2C7 672 aa20.89■□□□□ 0.93
Syne3-201ENSMUST00000067005 Cep164Q5DU05 1446 aa20.89■□□□□ 0.93
Syne3-201ENSMUST00000067005 Dcaf1Q80TR8 1506 aa20.82■□□□□ 0.92
Syne3-201ENSMUST00000067005 Plekhg3Q4VAC9 1341 aa20.8■□□□□ 0.92
Syne3-201ENSMUST00000067005 NeflP08551 543 aa20.8■□□□□ 0.92
Syne3-201ENSMUST00000067005 Supt5hO55201 1082 aaKnown RBP20.8■□□□□ 0.92
Syne3-201ENSMUST00000067005 Lmod2Q3UHZ5 550 aa20.8■□□□□ 0.92
Syne3-201ENSMUST00000067005 NacadQ5SWP3 1504 aa20.76■□□□□ 0.91
Syne3-201ENSMUST00000067005 Clip1Q922J3 1391 aa20.68■□□□□ 0.9
Syne3-201ENSMUST00000067005 ClspnQ80YR7 1315 aa20.66■□□□□ 0.9
Syne3-201ENSMUST00000067005 Chic1Q8CBW7 227 aa20.66■□□□□ 0.9
Syne3-201ENSMUST00000067005 Ppargc1bQ8VHJ7 1014 aa20.65■□□□□ 0.9
Syne3-201ENSMUST00000067005 Myt1Q8CFC2 1127 aa20.63■□□□□ 0.89
Syne3-201ENSMUST00000067005 Eif5bQ05D44 1216 aaKnown RBP20.62■□□□□ 0.89
Syne3-201ENSMUST00000067005 Amer1Q7TS75 1132 aa20.6■□□□□ 0.89
Syne3-201ENSMUST00000067005 Ccer2J3QPU5 274 aa20.59■□□□□ 0.89
Syne3-201ENSMUST00000067005 Hdac5Q9Z2V6 1113 aa20.58■□□□□ 0.88
Syne3-201ENSMUST00000067005 Baz1aO88379 1555 aa20.55■□□□□ 0.88
Syne3-201ENSMUST00000067005 Ubl4bQ9CQ84 188 aa20.53■□□□□ 0.88
Syne3-201ENSMUST00000067005 Hnrnpul2Q00PI9 745 aaKnown RBP20.51■□□□□ 0.87
Syne3-201ENSMUST00000067005 Zbtb7cQ8VCZ7 619 aa20.46■□□□□ 0.87
Syne3-201ENSMUST00000067005 Rtl5Q5DTT4 599 aa20.38■□□□□ 0.85
Syne3-201ENSMUST00000067005 Golga3P55937 1487 aa20.36■□□□□ 0.85
Syne3-201ENSMUST00000067005 Gm13697A2AK42 830 aa20.33■□□□□ 0.85
Syne3-201ENSMUST00000067005 Eid3Q3V124 375 aa20.32■□□□□ 0.84
Syne3-201ENSMUST00000067005 4933416C03RikQ3V063 378 aa20.29■□□□□ 0.84
Syne3-201ENSMUST00000067005 Ifnlr1Q8CGK5 535 aa20.29■□□□□ 0.84
Syne3-201ENSMUST00000067005 Rsf1E9PWW9 1441 aaKnown RBP20.26■□□□□ 0.83
Syne3-201ENSMUST00000067005 Erich6D3Z6S9 713 aa20.25■□□□□ 0.83
Syne3-201ENSMUST00000067005 Fkbp15Q6P9Q6 1216 aaKnown RBP20.24■□□□□ 0.83
Syne3-201ENSMUST00000067005 BlmO88700 1416 aa20.23■□□□□ 0.83
Syne3-201ENSMUST00000067005 Setd5Q5XJV7 1441 aa20.2■□□□□ 0.82
Syne3-201ENSMUST00000067005 Clstn2Q9ER65 966 aa20.18■□□□□ 0.82
Syne3-201ENSMUST00000067005 Nlrp6Q91WS2 869 aa20.18■□□□□ 0.82
Syne3-201ENSMUST00000067005 Kdm5dQ62240 1548 aa20.17■□□□□ 0.82
Syne3-201ENSMUST00000067005 Kif15Q6P9L6 1387 aa20.16■□□□□ 0.82
Syne3-201ENSMUST00000067005 Sall2Q9QX96 1004 aa20.16■□□□□ 0.82
Syne3-201ENSMUST00000067005 Anp32aO35381 247 aa20.16■□□□□ 0.82
Syne3-201ENSMUST00000067005 Ercc6F8VPZ5 1481 aa20.14■□□□□ 0.81
Syne3-201ENSMUST00000067005 Atp1b4Q99ME6 356 aa20.13■□□□□ 0.81
Syne3-201ENSMUST00000067005 Ttbk1Q6PCN3 1308 aa20.13■□□□□ 0.81
Syne3-201ENSMUST00000067005 Ccdc18Q640L5 1455 aa20.1■□□□□ 0.81
Syne3-201ENSMUST00000067005 Zbtb4Q5F293 982 aa20.09■□□□□ 0.81
Syne3-201ENSMUST00000067005 Chic2Q9D9G3 165 aa20.06■□□□□ 0.8
Syne3-201ENSMUST00000067005 Anks4bQ8K3X6 423 aa20.03■□□□□ 0.8
Syne3-201ENSMUST00000067005 Mapk8ip2Q9ERE9 830 aa20.03■□□□□ 0.8
Syne3-201ENSMUST00000067005 Eea1Q8BL66 1411 aa20.02■□□□□ 0.8
Syne3-201ENSMUST00000067005 Gm13695A2AK44 830 aa20.01■□□□□ 0.79
Syne3-201ENSMUST00000067005 4930567H17RikQ3V0K5 233 aa19.99■□□□□ 0.79
Syne3-201ENSMUST00000067005 Upf2A2AT37 1269 aaKnown RBP19.97■□□□□ 0.79
Syne3-201ENSMUST00000067005 Pds5bQ4VA53 1446 aaKnown RBP19.87■□□□□ 0.77
Syne3-201ENSMUST00000067005 Prdm10Q3UTQ7 1184 aa19.86■□□□□ 0.77
Syne3-201ENSMUST00000067005 Polr3glQ8R0C0 218 aa19.83■□□□□ 0.77
Syne3-201ENSMUST00000067005 Mrs2Q5NCE8 434 aa19.82■□□□□ 0.76
Syne3-201ENSMUST00000067005 Crybg2B7ZCC2 1516 aa19.81■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 93 ms