RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Gtf2e1Q9D0D5 440 aa19.98■□□□□ 0.79
Usp38-201ENSMUST00000042724 Wdr62Q3U3T8 1523 aa19.97■□□□□ 0.79
Usp38-201ENSMUST00000042724 Cc2d2bA0A286YDU8 1405 aa19.96■□□□□ 0.79
Usp38-201ENSMUST00000042724 Mapk8ip3Q9ESN9 1337 aa19.96■□□□□ 0.79
Usp38-201ENSMUST00000042724 Top2bQ64511 1612 aa19.95■□□□□ 0.78
Usp38-201ENSMUST00000042724 Cnga1P29974 684 aa19.94■□□□□ 0.78
Usp38-201ENSMUST00000042724 Fgd1P52734 960 aa19.93■□□□□ 0.78
Usp38-201ENSMUST00000042724 Pabpn1Q8CCS6 302 aaKnown RBP19.93■□□□□ 0.78
Usp38-201ENSMUST00000042724 DiexfQ8BTT6 772 aaKnown RBP19.92■□□□□ 0.78
Usp38-201ENSMUST00000042724 Tdrd9Q14BI7 1383 aa19.91■□□□□ 0.78
Usp38-201ENSMUST00000042724 Mroh2bQ7M6Y6 1581 aa19.91■□□□□ 0.78
Usp38-201ENSMUST00000042724 Neurod2Q62414 383 aa19.9■□□□□ 0.78
Usp38-201ENSMUST00000042724 Naip1Q9QWK5 1403 aa19.9■□□□□ 0.78
Usp38-201ENSMUST00000042724 Tmf1B9EKI3 1091 aa19.9■□□□□ 0.78
Usp38-201ENSMUST00000042724 Rsph4aQ8BYM7 716 aa19.9■□□□□ 0.78
Usp38-201ENSMUST00000042724 Usp47Q8BY87 1376 aa19.88■□□□□ 0.77
Usp38-201ENSMUST00000042724 1700123L14RikQ3V2K7 440 aa19.88■□□□□ 0.77
Usp38-201ENSMUST00000042724 Zfp777B9EKF4 885 aa19.88■□□□□ 0.77
Usp38-201ENSMUST00000042724 NgefQ8CHT1 710 aa19.88■□□□□ 0.77
Usp38-201ENSMUST00000042724 PtprkP35822 1457 aa19.87■□□□□ 0.77
Usp38-201ENSMUST00000042724 Exoc6Q8R313 802 aa19.87■□□□□ 0.77
Usp38-201ENSMUST00000042724 Rock2P70336 1388 aa19.86■□□□□ 0.77
Usp38-201ENSMUST00000042724 Srcin1Q9QWI6 1250 aa19.86■□□□□ 0.77
Usp38-201ENSMUST00000042724 Stk26Q99JT2 416 aa19.85■□□□□ 0.77
Usp38-201ENSMUST00000042724 Spag9Q58A65 1321 aaKnown RBP19.85■□□□□ 0.77
Usp38-201ENSMUST00000042724 Arid4bA2CG63 1314 aaKnown RBP19.84■□□□□ 0.77
Usp38-201ENSMUST00000042724 Arap1Q4LDD4 1452 aa19.84■□□□□ 0.77
Usp38-201ENSMUST00000042724 Camsap1A2AHC3 1581 aa19.83■□□□□ 0.77
Usp38-201ENSMUST00000042724 Gm7298A0A0N4SVU1 1476 aa19.83■□□□□ 0.77
Usp38-201ENSMUST00000042724 Iqcf3Q9D498 203 aa19.82■□□□□ 0.76
Usp38-201ENSMUST00000042724 Apbb1Q9QXJ1 710 aa19.81■□□□□ 0.76
Usp38-201ENSMUST00000042724 Arhgef5E9Q7D5 1581 aa19.8■□□□□ 0.76
Usp38-201ENSMUST00000042724 Stard8Q8K031 1019 aa19.8■□□□□ 0.76
Usp38-201ENSMUST00000042724 Ankrd36D3Z4K0 1415 aa19.79■□□□□ 0.76
Usp38-201ENSMUST00000042724 Zscan21Q07231 555 aa19.78■□□□□ 0.76
Usp38-201ENSMUST00000042724 Lamc3Q9R0B6 1581 aa19.78■□□□□ 0.76
Usp38-201ENSMUST00000042724 Ift140E9PY46 1464 aa19.77■□□□□ 0.76
Usp38-201ENSMUST00000042724 NudcO35685 332 aaKnown RBP19.77■□□□□ 0.76
Usp38-201ENSMUST00000042724 Arhgap31A6X8Z5 1425 aa19.77■□□□□ 0.75
Usp38-201ENSMUST00000042724 Vps8Q0P5W1 1427 aa19.77■□□□□ 0.75
Usp38-201ENSMUST00000042724 Fgd6Q69ZL1 1399 aa19.76■□□□□ 0.75
Usp38-201ENSMUST00000042724 Psme1P97371 249 aa19.76■□□□□ 0.75
Usp38-201ENSMUST00000042724 Txndc2Q6P902 515 aa19.75■□□□□ 0.75
Usp38-201ENSMUST00000042724 EprsQ8CGC7 1512 aaKnown RBP19.75■□□□□ 0.75
Usp38-201ENSMUST00000042724 Irx6Q9ER75 438 aa19.75■□□□□ 0.75
Usp38-201ENSMUST00000042724 Plb1Q3TTY0 1478 aa19.74■□□□□ 0.75
Usp38-201ENSMUST00000042724 Trim30dE9PWL0 497 aa19.74■□□□□ 0.75
Usp38-201ENSMUST00000042724 Dcaf11Q91VU6 549 aa19.72■□□□□ 0.75
Usp38-201ENSMUST00000042724 Fan1Q69ZT1 1020 aa19.72■□□□□ 0.75
Usp38-201ENSMUST00000042724 Mak16Q8BGS0 296 aaKnown RBP19.7■□□□□ 0.74
Usp38-201ENSMUST00000042724 Gm6268A2A3U9 297 aa19.7■□□□□ 0.74
Usp38-201ENSMUST00000042724 CadpsQ80TJ1 1355 aa19.69■□□□□ 0.74
Usp38-201ENSMUST00000042724 Chmp4bQ9D8B3 224 aaKnown RBP19.69■□□□□ 0.74
Usp38-201ENSMUST00000042724 SafbD3YXK2 937 aaKnown RBP19.68■□□□□ 0.74
Usp38-201ENSMUST00000042724 Prdm16A2A935 1275 aa19.68■□□□□ 0.74
Usp38-201ENSMUST00000042724 Slc4a1apE9PX68 744 aa19.68■□□□□ 0.74
Usp38-201ENSMUST00000042724 Rwdd1Q9CQK7 243 aa19.67■□□□□ 0.74
Usp38-201ENSMUST00000042724 CanxP35564 591 aaKnown RBP19.67■□□□□ 0.74
Usp38-201ENSMUST00000042724 Tiam1Q60610 1591 aa19.67■□□□□ 0.74
Usp38-201ENSMUST00000042724 Fam71e1A1L3C1 212 aa19.67■□□□□ 0.74
Usp38-201ENSMUST00000042724 AqrQ8CFQ3 1481 aaKnown RBP19.67■□□□□ 0.74
Usp38-201ENSMUST00000042724 Hsp90ab1P11499 724 aaKnown RBP19.67■□□□□ 0.74
Usp38-201ENSMUST00000042724 Nsd2Q8BVE8 1365 aa19.66■□□□□ 0.74
Usp38-201ENSMUST00000042724 4930567H17RikQ3V0K5 233 aa19.66■□□□□ 0.74
Usp38-201ENSMUST00000042724 Speer4f1Q9D5Q6 258 aa19.66■□□□□ 0.74
Usp38-201ENSMUST00000042724 Crocc2F6XLV1 1638 aa19.66■□□□□ 0.74
Usp38-201ENSMUST00000042724 Ncapd3Q6ZQK0 1506 aa19.66■□□□□ 0.74
Usp38-201ENSMUST00000042724 Mbd3Q9Z2D8 285 aaKnown RBP19.66■□□□□ 0.74
Usp38-201ENSMUST00000042724 CenpjQ569L8 1344 aa19.64■□□□□ 0.74
Usp38-201ENSMUST00000042724 U2af1Q9D883 239 aaKnown RBP19.64■□□□□ 0.73
Usp38-201ENSMUST00000042724 Smg6P61406 1418 aaKnown RBP19.63■□□□□ 0.73
Usp38-201ENSMUST00000042724 Fam163aQ8CAA5 168 aa19.63■□□□□ 0.73
Usp38-201ENSMUST00000042724 Dapk1Q80YE7 1442 aa19.62■□□□□ 0.73
Usp38-201ENSMUST00000042724 Utp14aQ640M1 767 aaKnown RBP19.62■□□□□ 0.73
Usp38-201ENSMUST00000042724 SynmQ70IV5 1561 aa19.61■□□□□ 0.73
Usp38-201ENSMUST00000042724 1700019A02RikA0A087WPV9 146 aa19.61■□□□□ 0.73
Usp38-201ENSMUST00000042724 Golga2Q921M4 999 aa19.61■□□□□ 0.73
Usp38-201ENSMUST00000042724 Ccdc141E9Q8Q6 1531 aa19.61■□□□□ 0.73
Usp38-201ENSMUST00000042724 Gm14025A2AP89 1413 aa19.61■□□□□ 0.73
Usp38-201ENSMUST00000042724 Arhgap5P97393 1501 aa19.6■□□□□ 0.73
Usp38-201ENSMUST00000042724 ErbinQ80TH2 1402 aa19.59■□□□□ 0.73
Usp38-201ENSMUST00000042724 Birc3O08863 600 aa19.59■□□□□ 0.73
Usp38-201ENSMUST00000042724 Pde4cQ3UEI1 686 aa19.58■□□□□ 0.73
Usp38-201ENSMUST00000042724 Zfp644E9QA22 1323 aa19.58■□□□□ 0.73
Usp38-201ENSMUST00000042724 Pank3Q8R2W9 370 aa19.57■□□□□ 0.72
Usp38-201ENSMUST00000042724 MlecQ6ZQI3 291 aaKnown RBP19.56■□□□□ 0.72
Usp38-201ENSMUST00000042724 Usp40Q8BWR4 1235 aa19.56■□□□□ 0.72
Usp38-201ENSMUST00000042724 Znf316Q6PGE4 1016 aa19.54■□□□□ 0.72
Usp38-201ENSMUST00000042724 TchhA0A0B4J1F9 1599 aa19.54■□□□□ 0.72
Usp38-201ENSMUST00000042724 Rtf1A2AQ19 715 aaKnown RBP19.53■□□□□ 0.72
Usp38-201ENSMUST00000042724 Dbr1Q923B1 550 aa19.53■□□□□ 0.72
Usp38-201ENSMUST00000042724 Shq1Q7TMX5 569 aa19.51■□□□□ 0.71
Usp38-201ENSMUST00000042724 Map7O88735 730 aa19.51■□□□□ 0.71
Usp38-201ENSMUST00000042724 Map3k5O35099 1380 aa19.51■□□□□ 0.71
Usp38-201ENSMUST00000042724 Sox12Q04890 314 aa19.51■□□□□ 0.71
Usp38-201ENSMUST00000042724 Fam184bQ0KK56 942 aa19.5■□□□□ 0.71
Usp38-201ENSMUST00000042724 Tcerg1Q8CGF7 1100 aaKnown RBP19.5■□□□□ 0.71
Usp38-201ENSMUST00000042724 Inpp5dQ9ES52 1191 aa19.5■□□□□ 0.71
Usp38-201ENSMUST00000042724 Grin2aP35436 1464 aa19.5■□□□□ 0.71
Usp38-201ENSMUST00000042724 B4galnt3Q6L8S8 986 aa19.5■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms