RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Rhox8Q6VSS7 320 aa27.62■■■□□ 2.01
Usp38-201ENSMUST00000042724 NischQ80TM9 1593 aa25.88■■□□□ 1.73
Usp38-201ENSMUST00000042724 Ccdc136Q3TVA9 1136 aa24.79■■□□□ 1.56
Usp38-201ENSMUST00000042724 Esf1Q3V1V3 845 aaKnown RBP24.47■■□□□ 1.51
Usp38-201ENSMUST00000042724 Rpgrip1Q9EPQ2 1331 aa24.42■■□□□ 1.5
Usp38-201ENSMUST00000042724 Trim41Q5NCC3 630 aa24.41■■□□□ 1.5
Usp38-201ENSMUST00000042724 Abcc9P70170 1546 aa24.38■■□□□ 1.49
Usp38-201ENSMUST00000042724 Cngb1E1AZ71 1325 aa24.37■■□□□ 1.49
Usp38-201ENSMUST00000042724 Ehmt2Q9Z148 1263 aaKnown RBP24.21■■□□□ 1.47
Usp38-201ENSMUST00000042724 Gab3Q8BSM5 595 aa23.92■■□□□ 1.42
Usp38-201ENSMUST00000042724 Abcc8B2RUS7 1588 aa23.91■■□□□ 1.42
Usp38-201ENSMUST00000042724 Npm2Q80W85 207 aa23.73■■□□□ 1.39
Usp38-201ENSMUST00000042724 Zeb1Q64318 1117 aa23.7■■□□□ 1.38
Usp38-201ENSMUST00000042724 Ccdc180J3QNE4 1664 aa23.64■■□□□ 1.37
Usp38-201ENSMUST00000042724 Rtl1Q7M732 1744 aa23.58■■□□□ 1.37
Usp38-201ENSMUST00000042724 Zcchc6Q5BLK4 1491 aaKnown RBP23.56■■□□□ 1.36
Usp38-201ENSMUST00000042724 Myt1lP97500 1187 aa23.5■■□□□ 1.35
Usp38-201ENSMUST00000042724 Gm35339A0A140LHH9 1649 aa23.48■■□□□ 1.35
Usp38-201ENSMUST00000042724 HrcG5E8J6 738 aa23.42■■□□□ 1.34
Usp38-201ENSMUST00000042724 Las1lA2BE28 776 aaKnown RBP23.32■■□□□ 1.32
Usp38-201ENSMUST00000042724 Ube2uB1AUC4 352 aa23.24■■□□□ 1.31
Usp38-201ENSMUST00000042724 Wdr66E9Q743 1299 aa23.18■■□□□ 1.3
Usp38-201ENSMUST00000042724 Acin1Q9JIX8 1338 aaKnown RBP23.11■■□□□ 1.29
Usp38-201ENSMUST00000042724 Il27Q8K3I6 234 aa23.07■■□□□ 1.28
Usp38-201ENSMUST00000042724 UbtfP25976 765 aaKnown RBP22.92■■□□□ 1.26
Usp38-201ENSMUST00000042724 NefmP08553 848 aa22.83■■□□□ 1.25
Usp38-201ENSMUST00000042724 Rb1cc1Q9ESK9 1588 aa22.73■■□□□ 1.23
Usp38-201ENSMUST00000042724 Brd4Q9ESU6 1400 aaKnown RBP22.58■■□□□ 1.21
Usp38-201ENSMUST00000042724 NacadQ5SWP3 1504 aa22.57■■□□□ 1.2
Usp38-201ENSMUST00000042724 Ap3b1Q9Z1T1 1105 aa22.45■■□□□ 1.18
Usp38-201ENSMUST00000042724 Npm1Q61937 292 aaKnown RBP22.43■■□□□ 1.18
Usp38-201ENSMUST00000042724 Dcaf1Q80TR8 1506 aa22.39■■□□□ 1.18
Usp38-201ENSMUST00000042724 Fam50aQ9WV03 339 aaKnown RBP22.29■■□□□ 1.16
Usp38-201ENSMUST00000042724 Baz1aO88379 1555 aa22.29■■□□□ 1.16
Usp38-201ENSMUST00000042724 Cep164Q5DU05 1446 aa22.17■■□□□ 1.14
Usp38-201ENSMUST00000042724 Kdm5dQ62240 1548 aa22.14■■□□□ 1.13
Usp38-201ENSMUST00000042724 Chic1Q8CBW7 227 aa22.11■■□□□ 1.13
Usp38-201ENSMUST00000042724 Stra8P70278 393 aa22.08■■□□□ 1.12
Usp38-201ENSMUST00000042724 Pcgf6Q99NA9 353 aa22.06■■□□□ 1.12
Usp38-201ENSMUST00000042724 Mier1Q5UAK0 511 aa22.04■■□□□ 1.12
Usp38-201ENSMUST00000042724 Plekhg3Q4VAC9 1341 aa21.97■■□□□ 1.11
Usp38-201ENSMUST00000042724 Ubl4bQ9CQ84 188 aa21.97■■□□□ 1.11
Usp38-201ENSMUST00000042724 Lmod2Q3UHZ5 550 aa21.95■■□□□ 1.1
Usp38-201ENSMUST00000042724 Pelp1Q9DBD5 1123 aaKnown RBP21.95■■□□□ 1.1
Usp38-201ENSMUST00000042724 NclP09405 707 aaKnown RBP21.94■■□□□ 1.1
Usp38-201ENSMUST00000042724 TonslQ6NZL6 1363 aa21.91■■□□□ 1.1
Usp38-201ENSMUST00000042724 Cdk11bP24788 784 aaKnown RBP21.88■■□□□ 1.09
Usp38-201ENSMUST00000042724 Slc24a1Q91WD8 1130 aa21.87■■□□□ 1.09
Usp38-201ENSMUST00000042724 Neurod1Q60867 357 aa21.87■■□□□ 1.09
Usp38-201ENSMUST00000042724 Clip1Q922J3 1391 aa21.83■■□□□ 1.08
Usp38-201ENSMUST00000042724 Golga3P55937 1487 aa21.81■■□□□ 1.08
Usp38-201ENSMUST00000042724 Supt5hO55201 1082 aaKnown RBP21.79■■□□□ 1.08
Usp38-201ENSMUST00000042724 CenpbP27790 599 aa21.73■■□□□ 1.07
Usp38-201ENSMUST00000042724 Nop58Q6DFW4 536 aaKnown RBP21.72■■□□□ 1.07
Usp38-201ENSMUST00000042724 Ppargc1bQ8VHJ7 1014 aa21.71■■□□□ 1.07
Usp38-201ENSMUST00000042724 Anp32bQ9EST5 272 aaKnown RBP21.69■■□□□ 1.06
Usp38-201ENSMUST00000042724 Rsf1E9PWW9 1441 aaKnown RBP21.67■■□□□ 1.06
Usp38-201ENSMUST00000042724 Os9Q8K2C7 672 aa21.66■■□□□ 1.06
Usp38-201ENSMUST00000042724 Ercc6F8VPZ5 1481 aa21.66■■□□□ 1.06
Usp38-201ENSMUST00000042724 NrdcQ8BHG1 1161 aa21.64■■□□□ 1.05
Usp38-201ENSMUST00000042724 Kif15Q6P9L6 1387 aa21.62■■□□□ 1.05
Usp38-201ENSMUST00000042724 Sycp2Q9CUU3 1500 aa21.6■■□□□ 1.05
Usp38-201ENSMUST00000042724 Zbtb7cQ8VCZ7 619 aa21.53■■□□□ 1.04
Usp38-201ENSMUST00000042724 Crybg2B7ZCC2 1516 aa21.5■■□□□ 1.03
Usp38-201ENSMUST00000042724 Ifnlr1Q8CGK5 535 aa21.48■■□□□ 1.03
Usp38-201ENSMUST00000042724 Pds5bQ4VA53 1446 aaKnown RBP21.48■■□□□ 1.03
Usp38-201ENSMUST00000042724 Tnnt3Q9QZ47 272 aa21.48■■□□□ 1.03
Usp38-201ENSMUST00000042724 Hnrnpul2Q00PI9 745 aaKnown RBP21.47■■□□□ 1.03
Usp38-201ENSMUST00000042724 ScribQ80U72 1612 aa21.47■■□□□ 1.03
Usp38-201ENSMUST00000042724 Fkbp15Q6P9Q6 1216 aaKnown RBP21.46■■□□□ 1.03
Usp38-201ENSMUST00000042724 ClspnQ80YR7 1315 aa21.45■■□□□ 1.02
Usp38-201ENSMUST00000042724 Ccdc18Q640L5 1455 aa21.44■■□□□ 1.02
Usp38-201ENSMUST00000042724 Setd5Q5XJV7 1441 aa21.4■■□□□ 1.02
Usp38-201ENSMUST00000042724 Ccer2J3QPU5 274 aa21.4■■□□□ 1.02
Usp38-201ENSMUST00000042724 Eid3Q3V124 375 aa21.4■■□□□ 1.02
Usp38-201ENSMUST00000042724 BlmO88700 1416 aa21.37■■□□□ 1.01
Usp38-201ENSMUST00000042724 Eif5bQ05D44 1216 aaKnown RBP21.26■□□□□ 0.99
Usp38-201ENSMUST00000042724 Hdac5Q9Z2V6 1113 aa21.23■□□□□ 0.99
Usp38-201ENSMUST00000042724 Eea1Q8BL66 1411 aa21.22■□□□□ 0.99
Usp38-201ENSMUST00000042724 Smarca2Q6DIC0 1577 aa21.21■□□□□ 0.99
Usp38-201ENSMUST00000042724 Gm13697A2AK42 830 aa21.2■□□□□ 0.98
Usp38-201ENSMUST00000042724 Erich6D3Z6S9 713 aa21.2■□□□□ 0.98
Usp38-201ENSMUST00000042724 Fmn1Q05860 1466 aa21.19■□□□□ 0.98
Usp38-201ENSMUST00000042724 NeflP08551 543 aa21.19■□□□□ 0.98
Usp38-201ENSMUST00000042724 CftrP26361 1476 aa21.18■□□□□ 0.98
Usp38-201ENSMUST00000042724 Chic2Q9D9G3 165 aa21.18■□□□□ 0.98
Usp38-201ENSMUST00000042724 Sall2Q9QX96 1004 aa21.17■□□□□ 0.98
Usp38-201ENSMUST00000042724 Ccdc88bQ4QRL3 1481 aa21.17■□□□□ 0.98
Usp38-201ENSMUST00000042724 Cecr2E9Q2Z1 1453 aa21.15■□□□□ 0.98
Usp38-201ENSMUST00000042724 Zbtb4Q5F293 982 aa21.06■□□□□ 0.96
Usp38-201ENSMUST00000042724 Mapk8ip2Q9ERE9 830 aa21.06■□□□□ 0.96
Usp38-201ENSMUST00000042724 Atad2bE9Q166 1460 aaKnown RBP21.05■□□□□ 0.96
Usp38-201ENSMUST00000042724 Clstn2Q9ER65 966 aa21.03■□□□□ 0.96
Usp38-201ENSMUST00000042724 Atp1b4Q99ME6 356 aa21■□□□□ 0.95
Usp38-201ENSMUST00000042724 Arhgap27A2AB59 869 aa20.98■□□□□ 0.95
Usp38-201ENSMUST00000042724 Synj1Q8CHC4 1574 aa20.98■□□□□ 0.95
Usp38-201ENSMUST00000042724 Cep162Q6ZQ06 1403 aa20.97■□□□□ 0.95
Usp38-201ENSMUST00000042724 Smarca4Q3TKT4 1613 aaKnown RBP20.96■□□□□ 0.95
Usp38-201ENSMUST00000042724 Ttbk1Q6PCN3 1308 aa20.93■□□□□ 0.94
Usp38-201ENSMUST00000042724 Phldb1Q6PDH0 1371 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 73.4 ms