RNA–Protein interactions for RNA: ENSMUST00000032201.7

Ret-201, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ret, Length 5,456 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-201ENSMUST00000032201 Pkd2O35245 966 aa16.42■□□□□ 0.22
Ret-201ENSMUST00000032201 Lemd3Q9WU40 921 aa16.42■□□□□ 0.22
Ret-201ENSMUST00000032201 B4galnt3Q6L8S8 986 aa16.42■□□□□ 0.22
Ret-201ENSMUST00000032201 U2surpQ6NV83 1029 aaKnown RBP16.42■□□□□ 0.22
Ret-201ENSMUST00000032201 AknaQ80VW7 1404 aa16.41■□□□□ 0.22
Ret-201ENSMUST00000032201 Rsph4aQ8BYM7 716 aa16.41■□□□□ 0.22
Ret-201ENSMUST00000032201 Psme1P97371 249 aa16.4■□□□□ 0.22
Ret-201ENSMUST00000032201 Speer4f1Q9D5Q6 258 aa16.4■□□□□ 0.22
Ret-201ENSMUST00000032201 Ifit1bl1D3Z6F0 470 aa16.39■□□□□ 0.22
Ret-201ENSMUST00000032201 Fyco1Q8VDC1 1437 aa16.39■□□□□ 0.21
Ret-201ENSMUST00000032201 Stk26Q99JT2 416 aa16.39■□□□□ 0.21
Ret-201ENSMUST00000032201 Hspa5P20029 655 aaKnown RBP16.38■□□□□ 0.21
Ret-201ENSMUST00000032201 Dhx57Q6P5D3 1388 aaKnown RBP16.38■□□□□ 0.21
Ret-201ENSMUST00000032201 Spag9Q58A65 1321 aaKnown RBP16.38■□□□□ 0.21
Ret-201ENSMUST00000032201 Q3TQI7 289 aaKnown RBP16.37■□□□□ 0.21
Ret-201ENSMUST00000032201 Calcoco2A2A6M5 331 aa16.36■□□□□ 0.21
Ret-201ENSMUST00000032201 U2af1Q9D883 239 aaKnown RBP16.35■□□□□ 0.21
Ret-201ENSMUST00000032201 Fmn1Q05860 1466 aa16.35■□□□□ 0.21
Ret-201ENSMUST00000032201 Rpap1Q80TE0 1409 aa16.35■□□□□ 0.21
Ret-201ENSMUST00000032201 Tpm3-rs7D3Z2H9 248 aa16.35■□□□□ 0.21
Ret-201ENSMUST00000032201 Aebp1Q640N1 1128 aa16.34■□□□□ 0.21
Ret-201ENSMUST00000032201 Tcerg1Q8CGF7 1100 aaKnown RBP16.34■□□□□ 0.21
Ret-201ENSMUST00000032201 Arid3cA6PWV5 409 aa16.34■□□□□ 0.21
Ret-201ENSMUST00000032201 Iffo2Q8R2V2 512 aa16.33■□□□□ 0.21
Ret-201ENSMUST00000032201 Arhgap35Q91YM2 1499 aa16.33■□□□□ 0.2
Ret-201ENSMUST00000032201 R3hcc1Q8BSI6 488 aa16.33■□□□□ 0.2
Ret-201ENSMUST00000032201 Zscan21Q07231 555 aa16.32■□□□□ 0.2
Ret-201ENSMUST00000032201 Golga2Q921M4 999 aa16.32■□□□□ 0.2
Ret-201ENSMUST00000032201 Txndc2Q6P902 515 aa16.32■□□□□ 0.2
Ret-201ENSMUST00000032201 EspnQ9ET47 871 aa16.32■□□□□ 0.2
Ret-201ENSMUST00000032201 Rock2P70336 1388 aa16.31■□□□□ 0.2
Ret-201ENSMUST00000032201 Chmp5Q9D7S9 219 aa16.31■□□□□ 0.2
Ret-201ENSMUST00000032201 Kdm5dQ62240 1548 aa16.3■□□□□ 0.2
Ret-201ENSMUST00000032201 MecomP14404 1042 aa16.3■□□□□ 0.2
Ret-201ENSMUST00000032201 Pcmtd1P59913 357 aa16.3■□□□□ 0.2
Ret-201ENSMUST00000032201 Birc3O08863 600 aa16.3■□□□□ 0.2
Ret-201ENSMUST00000032201 Smarce1O54941 411 aaKnown RBP16.3■□□□□ 0.2
Ret-201ENSMUST00000032201 Spryd3E9Q9B3 442 aa16.3■□□□□ 0.2
Ret-201ENSMUST00000032201 Mak16Q8BGS0 296 aaKnown RBP16.3■□□□□ 0.2
Ret-201ENSMUST00000032201 Trak1Q6PD31 939 aa16.29■□□□□ 0.2
Ret-201ENSMUST00000032201 Stard8Q8K031 1019 aa16.29■□□□□ 0.2
Ret-201ENSMUST00000032201 CntlnA2AM05 1397 aa16.29■□□□□ 0.2
Ret-201ENSMUST00000032201 Erich6bQ9D4S6 220 aa16.29■□□□□ 0.2
Ret-201ENSMUST00000032201 Tmco5bQ80X59 307 aa16.29■□□□□ 0.2
Ret-201ENSMUST00000032201 Cep162Q6ZQ06 1403 aa16.28■□□□□ 0.2
Ret-201ENSMUST00000032201 Plin1Q8CGN5 517 aa16.28■□□□□ 0.2
Ret-201ENSMUST00000032201 Q8BT18 775 aa16.28■□□□□ 0.2
Ret-201ENSMUST00000032201 1700123L14RikQ3V2K7 440 aa16.28■□□□□ 0.2
Ret-201ENSMUST00000032201 Mphosph9A6H5Y1 991 aa16.27■□□□□ 0.2
Ret-201ENSMUST00000032201 Dcaf11Q91VU6 549 aa16.27■□□□□ 0.2
Ret-201ENSMUST00000032201 Tnnt1O88346 262 aa16.26■□□□□ 0.19
Ret-201ENSMUST00000032201 Dnai1Q8C0M8 701 aa16.26■□□□□ 0.19
Ret-201ENSMUST00000032201 Exoc6Q8R313 802 aa16.25■□□□□ 0.19
Ret-201ENSMUST00000032201 Nup155Q99P88 1391 aaKnown RBP16.25■□□□□ 0.19
Ret-201ENSMUST00000032201 Sox12Q04890 314 aa16.25■□□□□ 0.19
Ret-201ENSMUST00000032201 Supt16hQ920B9 1047 aa16.24■□□□□ 0.19
Ret-201ENSMUST00000032201 CenpjQ569L8 1344 aa16.24■□□□□ 0.19
Ret-201ENSMUST00000032201 AU015836B2RUM3 263 aa16.23■□□□□ 0.19
Ret-201ENSMUST00000032201 Ccar1Q8CH18 1146 aaKnown RBP16.22■□□□□ 0.19
Ret-201ENSMUST00000032201 Cabp1Q9JLK7 227 aa16.22■□□□□ 0.19
Ret-201ENSMUST00000032201 CgnP59242 1191 aa16.22■□□□□ 0.19
Ret-201ENSMUST00000032201 Plekhh2Q8C115 1491 aa16.22■□□□□ 0.19
Ret-201ENSMUST00000032201 MlecQ6ZQI3 291 aaKnown RBP16.22■□□□□ 0.19
Ret-201ENSMUST00000032201 Dnttip2Q8R2M2 758 aaKnown RBP16.22■□□□□ 0.19
Ret-201ENSMUST00000032201 Cald1E9QA15 768 aaKnown RBP16.21■□□□□ 0.19
Ret-201ENSMUST00000032201 Srcin1Q9QWI6 1250 aa16.21■□□□□ 0.19
Ret-201ENSMUST00000032201 Ipo8Q7TMY7 1010 aa16.21■□□□□ 0.19
Ret-201ENSMUST00000032201 Baz1bQ9Z277 1479 aa16.2■□□□□ 0.18
Ret-201ENSMUST00000032201 Kif3bQ61771 747 aa16.2■□□□□ 0.18
Ret-201ENSMUST00000032201 Chmp3Q9CQ10 224 aa16.2■□□□□ 0.18
Ret-201ENSMUST00000032201 MsnP26041 577 aaKnown RBP16.19■□□□□ 0.18
Ret-201ENSMUST00000032201 Atp6v1dP57746 247 aa16.19■□□□□ 0.18
Ret-201ENSMUST00000032201 Irx3P81067 507 aa16.19■□□□□ 0.18
Ret-201ENSMUST00000032201 Ccdc47Q9D024 483 aaKnown RBP16.18■□□□□ 0.18
Ret-201ENSMUST00000032201 Ap3b2Q9JME5 1082 aa16.18■□□□□ 0.18
Ret-201ENSMUST00000032201 RdxP26043 583 aaKnown RBP16.17■□□□□ 0.18
Ret-201ENSMUST00000032201 Slc4a3P16283 1227 aa16.17■□□□□ 0.18
Ret-201ENSMUST00000032201 Tnnt2P50752 301 aa16.16■□□□□ 0.18
Ret-201ENSMUST00000032201 Mfap1aC0HKD8 439 aaKnown RBP16.16■□□□□ 0.18
Ret-201ENSMUST00000032201 Mfap1bC0HKD9 439 aaKnown RBP16.16■□□□□ 0.18
Ret-201ENSMUST00000032201 Cgnl1Q6AW69 1298 aa16.16■□□□□ 0.18
Ret-201ENSMUST00000032201 Cluap1Q8R3P7 413 aa16.16■□□□□ 0.18
Ret-201ENSMUST00000032201 Brpf1B2RRD7 1212 aa16.15■□□□□ 0.18
Ret-201ENSMUST00000032201 Znf316Q6PGE4 1016 aa16.15■□□□□ 0.18
Ret-201ENSMUST00000032201 Znf330Q922H9 316 aa16.15■□□□□ 0.18
Ret-201ENSMUST00000032201 Rab11fip3Q8CHD8 1047 aa16.14■□□□□ 0.17
Ret-201ENSMUST00000032201 Ksr2Q3UVC0 959 aa16.13■□□□□ 0.17
Ret-201ENSMUST00000032201 Cux2P70298 1426 aa16.12■□□□□ 0.17
Ret-201ENSMUST00000032201 Ipo9Q91YE6 1041 aa16.12■□□□□ 0.17
Ret-201ENSMUST00000032201 Stk31Q99MW1 1018 aa16.11■□□□□ 0.17
Ret-201ENSMUST00000032201 Carmil1Q6EDY6 1374 aa16.1■□□□□ 0.17
Ret-201ENSMUST00000032201 Sin3aQ60520 1274 aaKnown RBP16.1■□□□□ 0.17
Ret-201ENSMUST00000032201 Tpd52l1O54818 204 aa16.09■□□□□ 0.17
Ret-201ENSMUST00000032201 Ccdc88bQ4QRL3 1481 aa16.09■□□□□ 0.17
Ret-201ENSMUST00000032201 Pak3Q61036 559 aa16.08■□□□□ 0.17
Ret-201ENSMUST00000032201 Utp14aQ640M1 767 aaKnown RBP16.08■□□□□ 0.17
Ret-201ENSMUST00000032201 Tpm3P21107 285 aaKnown RBP16.08■□□□□ 0.17
Ret-201ENSMUST00000032201 SetQ9EQU5 289 aaKnown RBP16.08■□□□□ 0.17
Ret-201ENSMUST00000032201 Cspp1B2RX88 1205 aa16.08■□□□□ 0.16
Ret-201ENSMUST00000032201 Slc4a1apE9PX68 744 aa16.08■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms