RNA–Protein interactions for RNA: ENSMUST00000032201.7

Ret-201, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ret, Length 5,456 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-201ENSMUST00000032201 Rhox8Q6VSS7 320 aa22.9■■□□□ 1.26
Ret-201ENSMUST00000032201 Rpgrip1Q9EPQ2 1331 aa20.91■□□□□ 0.94
Ret-201ENSMUST00000032201 Cngb1E1AZ71 1325 aa20.4■□□□□ 0.86
Ret-201ENSMUST00000032201 Esf1Q3V1V3 845 aaKnown RBP20.32■□□□□ 0.84
Ret-201ENSMUST00000032201 Ehmt2Q9Z148 1263 aaKnown RBP20.25■□□□□ 0.83
Ret-201ENSMUST00000032201 Las1lA2BE28 776 aaKnown RBP20.23■□□□□ 0.83
Ret-201ENSMUST00000032201 Ube2uB1AUC4 352 aa20.14■□□□□ 0.81
Ret-201ENSMUST00000032201 Ccdc136Q3TVA9 1136 aa20.13■□□□□ 0.81
Ret-201ENSMUST00000032201 Wdr66E9Q743 1299 aa20.09■□□□□ 0.81
Ret-201ENSMUST00000032201 Pelp1Q9DBD5 1123 aaKnown RBP20.09■□□□□ 0.81
Ret-201ENSMUST00000032201 Zeb1Q64318 1117 aa20.04■□□□□ 0.8
Ret-201ENSMUST00000032201 Npm2Q80W85 207 aa19.93■□□□□ 0.78
Ret-201ENSMUST00000032201 Trim41Q5NCC3 630 aa19.92■□□□□ 0.78
Ret-201ENSMUST00000032201 Gab3Q8BSM5 595 aa19.82■□□□□ 0.76
Ret-201ENSMUST00000032201 Myt1lP97500 1187 aa19.62■□□□□ 0.73
Ret-201ENSMUST00000032201 NischQ80TM9 1593 aa19.47■□□□□ 0.71
Ret-201ENSMUST00000032201 Stra8P70278 393 aa19.3■□□□□ 0.68
Ret-201ENSMUST00000032201 NefmP08553 848 aa19.24■□□□□ 0.67
Ret-201ENSMUST00000032201 CenpbP27790 599 aa19.16■□□□□ 0.66
Ret-201ENSMUST00000032201 UbtfP25976 765 aaKnown RBP19.13■□□□□ 0.65
Ret-201ENSMUST00000032201 Amer1Q7TS75 1132 aa19.06■□□□□ 0.64
Ret-201ENSMUST00000032201 Acin1Q9JIX8 1338 aaKnown RBP19.05■□□□□ 0.64
Ret-201ENSMUST00000032201 Slc24a1Q91WD8 1130 aa18.95■□□□□ 0.62
Ret-201ENSMUST00000032201 Il27Q8K3I6 234 aa18.91■□□□□ 0.62
Ret-201ENSMUST00000032201 Anp32bQ9EST5 272 aaKnown RBP18.86■□□□□ 0.61
Ret-201ENSMUST00000032201 Ccdc180J3QNE4 1664 aa18.83■□□□□ 0.61
Ret-201ENSMUST00000032201 HrcG5E8J6 738 aa18.77■□□□□ 0.6
Ret-201ENSMUST00000032201 NrdcQ8BHG1 1161 aa18.73■□□□□ 0.59
Ret-201ENSMUST00000032201 Os9Q8K2C7 672 aa18.66■□□□□ 0.58
Ret-201ENSMUST00000032201 Fam50aQ9WV03 339 aaKnown RBP18.65■□□□□ 0.58
Ret-201ENSMUST00000032201 Cdk11bP24788 784 aaKnown RBP18.64■□□□□ 0.58
Ret-201ENSMUST00000032201 4930567H17RikQ3V0K5 233 aa18.64■□□□□ 0.57
Ret-201ENSMUST00000032201 NeflP08551 543 aa18.63■□□□□ 0.57
Ret-201ENSMUST00000032201 Rtl1Q7M732 1744 aa18.62■□□□□ 0.57
Ret-201ENSMUST00000032201 Tnnt3Q9QZ47 272 aa18.6■□□□□ 0.57
Ret-201ENSMUST00000032201 Ap3b1Q9Z1T1 1105 aa18.58■□□□□ 0.57
Ret-201ENSMUST00000032201 NclP09405 707 aaKnown RBP18.57■□□□□ 0.56
Ret-201ENSMUST00000032201 Neurod1Q60867 357 aa18.56■□□□□ 0.56
Ret-201ENSMUST00000032201 Zcchc6Q5BLK4 1491 aaKnown RBP18.55■□□□□ 0.56
Ret-201ENSMUST00000032201 4933416C03RikQ3V063 378 aa18.45■□□□□ 0.54
Ret-201ENSMUST00000032201 Nop58Q6DFW4 536 aaKnown RBP18.37■□□□□ 0.53
Ret-201ENSMUST00000032201 Eif5bQ05D44 1216 aaKnown RBP18.36■□□□□ 0.53
Ret-201ENSMUST00000032201 Abcc9P70170 1546 aa18.34■□□□□ 0.53
Ret-201ENSMUST00000032201 Ttbk1Q6PCN3 1308 aa18.31■□□□□ 0.52
Ret-201ENSMUST00000032201 Myt1Q8CFC2 1127 aa18.31■□□□□ 0.52
Ret-201ENSMUST00000032201 TonslQ6NZL6 1363 aa18.31■□□□□ 0.52
Ret-201ENSMUST00000032201 Npm1Q61937 292 aaKnown RBP18.22■□□□□ 0.51
Ret-201ENSMUST00000032201 Pcgf6Q99NA9 353 aa18.18■□□□□ 0.5
Ret-201ENSMUST00000032201 Gm13697A2AK42 830 aa18.18■□□□□ 0.5
Ret-201ENSMUST00000032201 Gm35339A0A140LHH9 1649 aa18.17■□□□□ 0.5
Ret-201ENSMUST00000032201 Rtl5Q5DTT4 599 aa18.12■□□□□ 0.49
Ret-201ENSMUST00000032201 Hnrnpul2Q00PI9 745 aaKnown RBP18.08■□□□□ 0.48
Ret-201ENSMUST00000032201 Zbtb7cQ8VCZ7 619 aa18.06■□□□□ 0.48
Ret-201ENSMUST00000032201 Hdac5Q9Z2V6 1113 aa18.05■□□□□ 0.48
Ret-201ENSMUST00000032201 Ppargc1bQ8VHJ7 1014 aa18.02■□□□□ 0.48
Ret-201ENSMUST00000032201 Lmod2Q3UHZ5 550 aa18.01■□□□□ 0.47
Ret-201ENSMUST00000032201 Mier1Q5UAK0 511 aa17.98■□□□□ 0.47
Ret-201ENSMUST00000032201 Nlrp6Q91WS2 869 aa17.94■□□□□ 0.46
Ret-201ENSMUST00000032201 Atp1b4Q99ME6 356 aa17.92■□□□□ 0.46
Ret-201ENSMUST00000032201 Ifnlr1Q8CGK5 535 aa17.9■□□□□ 0.46
Ret-201ENSMUST00000032201 Erich6D3Z6S9 713 aa17.89■□□□□ 0.46
Ret-201ENSMUST00000032201 Supt5hO55201 1082 aaKnown RBP17.88■□□□□ 0.45
Ret-201ENSMUST00000032201 Chic1Q8CBW7 227 aa17.87■□□□□ 0.45
Ret-201ENSMUST00000032201 Plekhg3Q4VAC9 1341 aa17.86■□□□□ 0.45
Ret-201ENSMUST00000032201 Gm13695A2AK44 830 aa17.84■□□□□ 0.45
Ret-201ENSMUST00000032201 ClspnQ80YR7 1315 aa17.83■□□□□ 0.45
Ret-201ENSMUST00000032201 Anp32aO35381 247 aa17.76■□□□□ 0.43
Ret-201ENSMUST00000032201 Zbtb4Q5F293 982 aa17.74■□□□□ 0.43
Ret-201ENSMUST00000032201 DiexfQ8BTT6 772 aaKnown RBP17.72■□□□□ 0.43
Ret-201ENSMUST00000032201 Polr3glQ8R0C0 218 aa17.7■□□□□ 0.42
Ret-201ENSMUST00000032201 Brd4Q9ESU6 1400 aaKnown RBP17.69■□□□□ 0.42
Ret-201ENSMUST00000032201 Ccer2J3QPU5 274 aa17.67■□□□□ 0.42
Ret-201ENSMUST00000032201 DaxxO35613 739 aa17.65■□□□□ 0.42
Ret-201ENSMUST00000032201 Fkbp15Q6P9Q6 1216 aaKnown RBP17.64■□□□□ 0.41
Ret-201ENSMUST00000032201 Prdm10Q3UTQ7 1184 aa17.63■□□□□ 0.41
Ret-201ENSMUST00000032201 Clip1Q922J3 1391 aa17.62■□□□□ 0.41
Ret-201ENSMUST00000032201 Upf2A2AT37 1269 aaKnown RBP17.52■□□□□ 0.39
Ret-201ENSMUST00000032201 Abcc8B2RUS7 1588 aa17.5■□□□□ 0.39
Ret-201ENSMUST00000032201 Clstn2Q9ER65 966 aa17.49■□□□□ 0.39
Ret-201ENSMUST00000032201 Ubl4bQ9CQ84 188 aa17.48■□□□□ 0.39
Ret-201ENSMUST00000032201 Plppr3Q7TPB0 716 aa17.47■□□□□ 0.39
Ret-201ENSMUST00000032201 Eid3Q3V124 375 aa17.46■□□□□ 0.39
Ret-201ENSMUST00000032201 Cep164Q5DU05 1446 aa17.43■□□□□ 0.38
Ret-201ENSMUST00000032201 Mapk8ip2Q9ERE9 830 aa17.43■□□□□ 0.38
Ret-201ENSMUST00000032201 Safb2Q80YR5 991 aaKnown RBP17.4■□□□□ 0.38
Ret-201ENSMUST00000032201 ArxO35085 564 aa17.4■□□□□ 0.38
Ret-201ENSMUST00000032201 Hsp90aa1P07901 733 aaKnown RBP17.36■□□□□ 0.37
Ret-201ENSMUST00000032201 Csrnp3P59055 597 aa17.31■□□□□ 0.36
Ret-201ENSMUST00000032201 Chic2Q9D9G3 165 aa17.3■□□□□ 0.36
Ret-201ENSMUST00000032201 Dcaf1Q80TR8 1506 aa17.27■□□□□ 0.36
Ret-201ENSMUST00000032201 Fgd1P52734 960 aa17.27■□□□□ 0.36
Ret-201ENSMUST00000032201 Rangap1P46061 589 aaKnown RBP17.26■□□□□ 0.35
Ret-201ENSMUST00000032201 BlmO88700 1416 aa17.26■□□□□ 0.35
Ret-201ENSMUST00000032201 Calr4Q3TQS0 420 aa17.25■□□□□ 0.35
Ret-201ENSMUST00000032201 Rad21Q61550 635 aaKnown RBP17.25■□□□□ 0.35
Ret-201ENSMUST00000032201 CatipB9EKE5 520 aa17.22■□□□□ 0.35
Ret-201ENSMUST00000032201 Rb1cc1Q9ESK9 1588 aa17.21■□□□□ 0.35
Ret-201ENSMUST00000032201 Anks4bQ8K3X6 423 aa17.2■□□□□ 0.34
Ret-201ENSMUST00000032201 Ppp4r2Q0VGB7 417 aa17.19■□□□□ 0.34
Ret-201ENSMUST00000032201 P3h3Q8CG70 732 aa17.19■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 106.4 ms