RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Pkd2O35245 966 aa7□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Pes1Q9EQ61 584 aaKnown RBP7□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Carmil1Q6EDY6 1374 aa7□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Mak16Q8BGS0 296 aaKnown RBP7□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Atp6v1dP57746 247 aa7□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Rundc1Q0VDN7 615 aa7□□□□□ -1.29
Vps13d-201ENSMUST00000020441 AU015836B2RUM3 263 aa7□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Atad2bE9Q166 1460 aaKnown RBP7□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Stk24Q99KH8 431 aa6.99□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Polr1aO35134 1717 aaKnown RBP6.99□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Plekhh2Q8C115 1491 aa6.99□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Calcoco2A2A6M5 331 aa6.99□□□□□ -1.29
Vps13d-201ENSMUST00000020441 ArxO35085 564 aa6.99□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Trim26Q99PN3 545 aa6.99□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Nup155Q99P88 1391 aaKnown RBP6.98□□□□□ -1.29
Vps13d-201ENSMUST00000020441 CftrP26361 1476 aa6.98□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Cgnl1Q6AW69 1298 aa6.98□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Aebp2Q9Z248 504 aaKnown RBP6.98□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Chmp5Q9D7S9 219 aa6.97□□□□□ -1.29
Vps13d-201ENSMUST00000020441 R3hcc1Q8BSI6 488 aa6.97□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Golga2Q921M4 999 aa6.97□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Cttnbp2B9EJA2 1648 aa6.97□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Tpm3-rs7D3Z2H9 248 aa6.96□□□□□ -1.29
Vps13d-201ENSMUST00000020441 Plcb2A3KGF7 1181 aa6.96□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Cux2P70298 1426 aa6.96□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Nol10Q5RJG1 687 aaKnown RBP6.96□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Srcin1Q9QWI6 1250 aa6.96□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Smarca4Q3TKT4 1613 aaKnown RBP6.96□□□□□ -1.3
Vps13d-201ENSMUST00000020441 CenpjQ569L8 1344 aa6.96□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Ccar1Q8CH18 1146 aaKnown RBP6.95□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Psme1P97371 249 aa6.95□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Cabp1Q9JLK7 227 aa6.95□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Spag9Q58A65 1321 aaKnown RBP6.95□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Cald1E9QA15 768 aaKnown RBP6.94□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Plppr3Q7TPB0 716 aa6.94□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Ccnb3Q810T2 1396 aa6.94□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Cux1P53564 1515 aa6.94□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Ipo8Q7TMY7 1010 aa6.94□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Ipo9Q91YE6 1041 aa6.94□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Rangap1P46061 589 aaKnown RBP6.94□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Trak1Q6PD31 939 aa6.94□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Dnai1Q8C0M8 701 aa6.94□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Ncoa2Q61026 1462 aa6.93□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Neurod2Q62414 383 aa6.93□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Hspa5P20029 655 aaKnown RBP6.93□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Ccdc47Q9D024 483 aaKnown RBP6.93□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Ralbp1Q62172 648 aa6.92□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Efcab5A0JP43 1406 aa6.92□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Ankrd36D3Z4K0 1415 aa6.92□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Sh3bp5Q9Z131 463 aa6.92□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Fam71e1A1L3C1 212 aa6.92□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Ifit1bl1D3Z6F0 470 aa6.92□□□□□ -1.3
Vps13d-201ENSMUST00000020441 LrpprcQ6PB66 1392 aaKnown RBP6.91□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Prdm16A2A935 1275 aa6.91□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Hsp90b1P08113 802 aaKnown RBP6.91□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Rapgef2Q8CHG7 1496 aa6.91□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Ppp1r18Q8BQ30 594 aa6.91□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Gprasp1Q5U4C1 1347 aa6.91□□□□□ -1.3
Vps13d-201ENSMUST00000020441 U2af1Q9D883 239 aaKnown RBP6.91□□□□□ -1.3
Vps13d-201ENSMUST00000020441 RdxP26043 583 aaKnown RBP6.9□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Speer4f1Q9D5Q6 258 aa6.9□□□□□ -1.3
Vps13d-201ENSMUST00000020441 MyclP10166 368 aa6.9□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Ccdc88bQ4QRL3 1481 aa6.9□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Irx3P81067 507 aa6.9□□□□□ -1.3
Vps13d-201ENSMUST00000020441 Q3TQI7 289 aaKnown RBP6.9□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Rsph3aQ3UFY4 516 aa6.9□□□□□ -1.31
Vps13d-201ENSMUST00000020441 1700123L14RikQ3V2K7 440 aa6.9□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Cspp1B2RX88 1205 aa6.89□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Rrp12Q6P5B0 1295 aaKnown RBP6.89□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Hmgb2P30681 210 aaKnown RBP6.89□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Supt16hQ920B9 1047 aa6.88□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Smg6P61406 1418 aaKnown RBP6.88□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Smc4Q8CG47 1286 aa6.88□□□□□ -1.31
Vps13d-201ENSMUST00000020441 AknaQ80VW7 1404 aa6.88□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Ddx11Q6AXC6 880 aa6.88□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Dcaf11Q91VU6 549 aa6.88□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Chmp4cQ9D7F7 232 aa6.88□□□□□ -1.31
Vps13d-201ENSMUST00000020441 A0A1L1SQF0 893 aa6.87□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Ddrgk1Q80WW9 315 aa6.87□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Atl3Q91YH5 541 aa6.87□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Synj1Q8CHC4 1574 aa6.87□□□□□ -1.31
Vps13d-201ENSMUST00000020441 MecomP14404 1042 aa6.87□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Evc2Q8K1G2 1220 aa6.87□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Txndc2Q6P902 515 aa6.87□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Iffo2Q8R2V2 512 aa6.87□□□□□ -1.31
Vps13d-201ENSMUST00000020441 St18Q80TY4 1045 aa6.86□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Map7d2A2AG50 781 aa6.86□□□□□ -1.31
Vps13d-201ENSMUST00000020441 MsnP26041 577 aaKnown RBP6.86□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Srek1Q8BZX4 494 aaKnown RBP6.86□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Nsd2Q8BVE8 1365 aa6.85□□□□□ -1.31
Vps13d-201ENSMUST00000020441 FanciQ8K368 1330 aa6.85□□□□□ -1.31
Vps13d-201ENSMUST00000020441 NgefQ8CHT1 710 aa6.85□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Ap3b2Q9JME5 1082 aa6.85□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Anapc15P60007 132 aa6.85□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Gsdma3Q5Y4Y6 464 aa6.85□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Kif3bQ61771 747 aa6.85□□□□□ -1.31
Vps13d-201ENSMUST00000020441 SetQ9EQU5 289 aaKnown RBP6.85□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Apbb1Q9QXJ1 710 aa6.85□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Vsig10D3YX43 558 aa6.84□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Dhx8A2A4P0 1244 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms