Protein–RNA interactions for Protein: P30681

Hmgb2, High mobility group protein B2, mousemouse

Known RBP Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb2P30681 Gm25239-201ENSMUST00000174915 86 ntBASIC50.93■■■■■ 5.74
Hmgb2P30681 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC47.28■■■■■ 5.16
Hmgb2P30681 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC46.82■■■■■ 5.09
Hmgb2P30681 Gm24109-201ENSMUST00000175489 103 ntBASIC44.32■■■■■ 4.69
Hmgb2P30681 Gm15042-201ENSMUST00000120212 883 ntBASIC44.06■■■■■ 4.64
Hmgb2P30681 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC43.34■■■■■ 4.53
Hmgb2P30681 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC43.11■■■■■ 4.49
Hmgb2P30681 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC43.08■■■■■ 4.49
Hmgb2P30681 Gm15045-201ENSMUST00000117359 883 ntBASIC42.87■■■■■ 4.45
Hmgb2P30681 Gm23366-201ENSMUST00000175022 89 ntBASIC42.64■■■■■ 4.42
Hmgb2P30681 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC42.35■■■■■ 4.37
Hmgb2P30681 AC153911.1-202ENSMUST00000218534 1034 ntBASIC41.49■■■■■ 4.23
Hmgb2P30681 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC41.25■■■■■ 4.19
Hmgb2P30681 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC41.25■■■■■ 4.19
Hmgb2P30681 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC41.12■■■■■ 4.17
Hmgb2P30681 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC40.98■■■■■ 4.15
Hmgb2P30681 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC40.95■■■■■ 4.15
Hmgb2P30681 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC40.93■■■■■ 4.14
Hmgb2P30681 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC40.67■■■■■ 4.1
Hmgb2P30681 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
Hmgb2P30681 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC40.54■■■■■ 4.08
Hmgb2P30681 Gm25238-201ENSMUST00000174914 89 ntBASIC40.31■■■■■ 4.04
Hmgb2P30681 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.2■■■■■ 4.03
Hmgb2P30681 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40.06■■■■■ 4
Hmgb2P30681 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC39.82■■■■□ 3.97
Hmgb2P30681 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC39.81■■■■□ 3.96
Hmgb2P30681 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC39.55■■■■□ 3.92
Hmgb2P30681 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
Hmgb2P30681 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
Hmgb2P30681 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Hmgb2P30681 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC39.35■■■■□ 3.89
Hmgb2P30681 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC39.24■■■■□ 3.87
Hmgb2P30681 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC39.15■■■■□ 3.86
Hmgb2P30681 Gm25262-201ENSMUST00000174934 133 ntBASIC39.13■■■■□ 3.85
Hmgb2P30681 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.13■■■■□ 3.85
Hmgb2P30681 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
Hmgb2P30681 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38.87■■■■□ 3.81
Hmgb2P30681 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
Hmgb2P30681 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC38.82■■■■□ 3.8
Hmgb2P30681 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC38.74■■■■□ 3.79
Hmgb2P30681 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC38.74■■■■□ 3.79
Hmgb2P30681 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38.72■■■■□ 3.79
Hmgb2P30681 Gm27325-201ENSMUST00000175467 74 ntBASIC38.54■■■■□ 3.76
Hmgb2P30681 Gm26115-201ENSMUST00000175605 87 ntBASIC38.38■■■■□ 3.73
Hmgb2P30681 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC38.38■■■■□ 3.73
Hmgb2P30681 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Hmgb2P30681 Rab21-202ENSMUST00000218831 843 ntBASIC38.27■■■■□ 3.72
Hmgb2P30681 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.71
Hmgb2P30681 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC38.23■■■■□ 3.71
Hmgb2P30681 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC38.17■■■■□ 3.7
Hmgb2P30681 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
Hmgb2P30681 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC38.02■■■■□ 3.68
Hmgb2P30681 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC38.02■■■■□ 3.68
Hmgb2P30681 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.68
Hmgb2P30681 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
Hmgb2P30681 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
Hmgb2P30681 Gm8109-201ENSMUST00000194076 746 ntBASIC37.86■■■■□ 3.65
Hmgb2P30681 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37.8■■■■□ 3.64
Hmgb2P30681 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37.78■■■■□ 3.64
Hmgb2P30681 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
Hmgb2P30681 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.65■■■■□ 3.62
Hmgb2P30681 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC37.6■■■■□ 3.61
Hmgb2P30681 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC37.56■■■■□ 3.6
Hmgb2P30681 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC37.55■■■■□ 3.6
Hmgb2P30681 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC37.4■■■■□ 3.58
Hmgb2P30681 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC37.38■■■■□ 3.57
Hmgb2P30681 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC37.35■■■■□ 3.57
Hmgb2P30681 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC37.25■■■■□ 3.55
Hmgb2P30681 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
Hmgb2P30681 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
Hmgb2P30681 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC37.19■■■■□ 3.54
Hmgb2P30681 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Hmgb2P30681 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC37.07■■■■□ 3.52
Hmgb2P30681 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
Hmgb2P30681 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC36.96■■■■□ 3.51
Hmgb2P30681 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.94■■■■□ 3.5
Hmgb2P30681 Gm17082-201ENSMUST00000166043 1091 ntBASIC36.91■■■■□ 3.5
Hmgb2P30681 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC36.9■■■■□ 3.5
Hmgb2P30681 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
Hmgb2P30681 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
Hmgb2P30681 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC36.78■■■■□ 3.48
Hmgb2P30681 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC36.72■■■■□ 3.47
Hmgb2P30681 Psd-208ENSMUST00000224556 2034 ntBASIC36.69■■■■□ 3.46
Hmgb2P30681 Gm24804-201ENSMUST00000174982 85 ntBASIC36.68■■■■□ 3.46
Hmgb2P30681 Gm27322-201ENSMUST00000184007 104 ntBASIC36.65■■■■□ 3.46
Hmgb2P30681 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC36.63■■■■□ 3.45
Hmgb2P30681 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC36.6■■■■□ 3.45
Hmgb2P30681 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36.58■■■■□ 3.45
Hmgb2P30681 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
Hmgb2P30681 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC36.54■■■■□ 3.44
Hmgb2P30681 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC36.46■■■■□ 3.43
Hmgb2P30681 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC36.43■■■■□ 3.42
Hmgb2P30681 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC36.41■■■■□ 3.42
Hmgb2P30681 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Hmgb2P30681 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC36.29■■■■□ 3.4
Hmgb2P30681 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Hmgb2P30681 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC36.25■■■■□ 3.39
Hmgb2P30681 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC36.24■■■■□ 3.39
Hmgb2P30681 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
Hmgb2P30681 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC36.07■■■■□ 3.36
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms