RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C MGM1P32266 881 aa2.27□□□□□ -2.05
UBP11YKR098C AFG1P32317 509 aa2.27□□□□□ -2.05
UBP11YKR098C PUP2P32379 260 aa2.27□□□□□ -2.05
UBP11YKR098C YKL023WP36103 277 aaKnown RBP2.27□□□□□ -2.05
UBP11YKR098C STV1P37296 890 aa2.27□□□□□ -2.05
UBP11YKR098C CAJ1P39101 391 aa2.27□□□□□ -2.05
UBP11YKR098C PHO90P39535 881 aa2.27□□□□□ -2.05
UBP11YKR098C TIF4631P39935 952 aaKnown RBP2.27□□□□□ -2.05
UBP11YKR098C EFM4P40516 257 aa2.27□□□□□ -2.05
UBP11YKR098C SNO3P43544 222 aa2.27□□□□□ -2.05
UBP11YKR098C YJL055WP47044 245 aa2.27□□□□□ -2.05
UBP11YKR098C YJR154WP47181 346 aa2.27□□□□□ -2.05
UBP11YKR098C COS5P47187 383 aa2.27□□□□□ -2.05
UBP11YKR098C FMS1P50264 508 aa2.27□□□□□ -2.05
UBP11YKR098C BUD32P53323 261 aa2.27□□□□□ -2.05
UBP11YKR098C SMM1P53720 384 aaKnown RBP2.27□□□□□ -2.05
UBP11YKR098C PEX25Q02969 394 aa2.27□□□□□ -2.05
UBP11YKR098C RRP45Q05636 305 aaKnown RBP2.27□□□□□ -2.05
UBP11YKR098C MCP2Q06567 569 aa2.27□□□□□ -2.05
UBP11YKR098C YDL218WQ07629 317 aa2.27□□□□□ -2.05
UBP11YKR098C COS7Q07788 383 aa2.27□□□□□ -2.05
UBP11YKR098C RAV1P47104 1357 aa2.27□□□□□ -2.05
UBP11YKR098C SPS4P09937 338 aa2.26□□□□□ -2.05
UBP11YKR098C PEP5P12868 1029 aa2.26□□□□□ -2.05
UBP11YKR098C NIP100P33420 868 aa2.26□□□□□ -2.05
UBP11YKR098C BNA4P38169 460 aa2.26□□□□□ -2.05
UBP11YKR098C SLM4P38247 162 aa2.26□□□□□ -2.05
UBP11YKR098C URB2P47108 1174 aa2.26□□□□□ -2.05
UBP11YKR098C YGL138CP53122 345 aa2.26□□□□□ -2.05
UBP11YKR098C CUL3P53202 744 aa2.26□□□□□ -2.05
UBP11YKR098C YGR111WP53265 400 aa2.26□□□□□ -2.05
UBP11YKR098C SOL4P53315 255 aa2.26□□□□□ -2.05
UBP11YKR098C COP1P53622 1201 aaKnown RBP2.26□□□□□ -2.05
UBP11YKR098C KTR5P53966 522 aaPredicted RBP2.26□□□□□ -2.05
UBP11YKR098C SKO1Q02100 647 aa2.26□□□□□ -2.05
UBP11YKR098C NUP100Q02629 959 aa2.26□□□□□ -2.05
UBP11YKR098C VTC3Q02725 835 aa2.26□□□□□ -2.05
UBP11YKR098C SHR3Q02774 210 aa2.26□□□□□ -2.05
UBP11YKR098C ACL4Q03771 387 aa2.26□□□□□ -2.05
UBP11YKR098C YDR286CQ05530 114 aa2.26□□□□□ -2.05
UBP11YKR098C ORM2Q06144 216 aa2.26□□□□□ -2.05
UBP11YKR098C MMR1Q06324 491 aa2.26□□□□□ -2.05
UBP11YKR098C RPN5Q12250 445 aaKnown RBP2.26□□□□□ -2.05
UBP11YKR098C RRD2Q12461 358 aa2.26□□□□□ -2.05
UBP11YKR098C SPT7P35177 1332 aa2.26□□□□□ -2.05
UBP11YKR098C EDE1P34216 1381 aa2.26□□□□□ -2.05
UBP11YKR098C HIP1P06775 603 aa2.26□□□□□ -2.05
UBP11YKR098C RHO2P06781 192 aa2.26□□□□□ -2.05
UBP11YKR098C RPS2P25443 254 aaKnown RBP2.26□□□□□ -2.05
UBP11YKR098C GEX1P25596 615 aa2.26□□□□□ -2.05
UBP11YKR098C MSN2P33748 704 aa2.26□□□□□ -2.05
UBP11YKR098C LTV1P34078 463 aa2.26□□□□□ -2.05
UBP11YKR098C DUG2P38149 878 aa2.26□□□□□ -2.05
UBP11YKR098C NTC20P38302 140 aaPredicted RBP2.26□□□□□ -2.05
UBP11YKR098C LAG1P38703 411 aa2.26□□□□□ -2.05
UBP11YKR098C SER3P40054 469 aa2.26□□□□□ -2.05
UBP11YKR098C CFD1P40558 293 aa2.26□□□□□ -2.05
UBP11YKR098C VPS25P47142 202 aa2.26□□□□□ -2.05
UBP11YKR098C ECM27P47144 725 aa2.26□□□□□ -2.05
UBP11YKR098C YVH1Q02256 364 aaKnown RBP2.26□□□□□ -2.05
UBP11YKR098C YPL014WQ02606 381 aa2.26□□□□□ -2.05
UBP11YKR098C HOT1Q03213 719 aa2.26□□□□□ -2.05
UBP11YKR098C HEL2Q05580 639 aaKnown RBP2.26□□□□□ -2.05
UBP11YKR098C POS5Q06892 414 aa2.26□□□□□ -2.05
UBP11YKR098C UAF30Q08747 228 aa2.26□□□□□ -2.05
UBP11YKR098C RDR1Q08904 546 aa2.26□□□□□ -2.05
UBP11YKR098C PGK1P00560 416 aaKnown RBP2.25□□□□□ -2.05
UBP11YKR098C SUC2P00724 532 aa2.25□□□□□ -2.05
UBP11YKR098C SNC1P31109 117 aa2.25□□□□□ -2.05
UBP11YKR098C ANP1P32629 500 aa2.25□□□□□ -2.05
UBP11YKR098C HEL1P36113 551 aa2.25□□□□□ -2.05
UBP11YKR098C ARA1P38115 344 aa2.25□□□□□ -2.05
UBP11YKR098C YHR054CP38780 354 aa2.25□□□□□ -2.05
UBP11YKR098C TOM71P38825 639 aaKnown RBP2.25□□□□□ -2.05
UBP11YKR098C YPT11P48559 417 aa2.25□□□□□ -2.05
UBP11YKR098C ZPR1P53303 486 aaKnown RBP2.25□□□□□ -2.05
UBP11YKR098C RHO4Q00246 291 aa2.25□□□□□ -2.05
UBP11YKR098C CTL1Q03220 320 aaKnown RBP2.25□□□□□ -2.05
UBP11YKR098C RSF1Q05043 376 aa2.25□□□□□ -2.05
UBP11YKR098C DCI1Q08558 271 aa2.25□□□□□ -2.05
UBP11YKR098C PGC1Q08959 321 aa2.25□□□□□ -2.05
UBP11YKR098C VPS54Q12071 889 aa2.25□□□□□ -2.05
UBP11YKR098C YLR112WQ12130 139 aa2.25□□□□□ -2.05
UBP11YKR098C SKS1Q12505 502 aa2.25□□□□□ -2.05
UBP11YKR098C BRR1Q99177 341 aaPredicted RBP2.25□□□□□ -2.05
UBP11YKR098C GPH1P06738 902 aaKnown RBP2.25□□□□□ -2.05
UBP11YKR098C RIP1P08067 215 aa2.25□□□□□ -2.05
UBP11YKR098C LPD1P09624 499 aaKnown RBP2.25□□□□□ -2.05
UBP11YKR098C RPL1AP0CX43 217 aaKnown RBP2.25□□□□□ -2.05
UBP11YKR098C RPL1BP0CX44 217 aaKnown RBP2.25□□□□□ -2.05
UBP11YKR098C SPO7P18410 259 aa2.25□□□□□ -2.05
UBP11YKR098C ATP10P18496 279 aa2.25□□□□□ -2.05
UBP11YKR098C TYR1P20049 452 aa2.25□□□□□ -2.05
UBP11YKR098C VRG4P40107 337 aa2.25□□□□□ -2.05
UBP11YKR098C SYG1P40528 902 aa2.25□□□□□ -2.05
UBP11YKR098C YIL024CP40543 189 aa2.25□□□□□ -2.05
UBP11YKR098C GAT1P43574 510 aa2.25□□□□□ -2.05
UBP11YKR098C ATP22P50273 684 aaPredicted RBP2.25□□□□□ -2.05
UBP11YKR098C OCA1P50946 238 aaPredicted RBP2.25□□□□□ -2.05
UBP11YKR098C RPT4P53549 437 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 84.2 ms