Protein–RNA interactions for Protein: P40107

VRG4, GDP-mannose transporter 1, yeastyeast

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VRG4P40107 YML009W-BYML009W-B 477 nt19.58■□□□□ 0.72
VRG4P40107 NSR1YGR159C 1245 nt19.35■□□□□ 0.69
VRG4P40107 NOP1YDL014W 984 nt18.93■□□□□ 0.62
VRG4P40107 YKL036CYKL036C 393 nt17.58■□□□□ 0.4
VRG4P40107 MDJ1YFL016C 1536 nt17.28■□□□□ 0.36
VRG4P40107 Q0297Q0297 156 nt16.66■□□□□ 0.26
VRG4P40107 SRX1YKL086W 384 nt16.61■□□□□ 0.25
VRG4P40107 YJL027CYJL027C 417 nt16.43■□□□□ 0.22
VRG4P40107 SCS3YGL126W 1143 nt16.09■□□□□ 0.17
VRG4P40107 YCR051WYCR051W 669 nt15.78■□□□□ 0.12
VRG4P40107 DBP2YNL112W 1641 nt15.33■□□□□ 0.04
VRG4P40107 YOL085CYOL085C 342 nt15.28■□□□□ 0.04
VRG4P40107 PKP1YIL042C 1185 nt15.1■□□□□ 0.01
VRG4P40107 TRN1tP(UGG)A 72 nt15.03■□□□□ -0
VRG4P40107 SUF9tP(UGG)F 72 nt15.03■□□□□ -0
VRG4P40107 SUF8tP(UGG)H 72 nt15.03■□□□□ -0
VRG4P40107 tP(UGG)LtP(UGG)L 72 nt15.03■□□□□ -0
VRG4P40107 SUF7tP(UGG)M 72 nt15.03■□□□□ -0
VRG4P40107 tP(UGG)N1tP(UGG)N1 72 nt15.03■□□□□ -0
VRG4P40107 tP(UGG)N2tP(UGG)N2 72 nt15.03■□□□□ -0
VRG4P40107 tP(UGG)O1tP(UGG)O1 72 nt15.03■□□□□ -0
VRG4P40107 SUF11tP(UGG)O2 72 nt15.03■□□□□ -0
VRG4P40107 RPP1BYDL130W 321 nt14.95□□□□□ -0.02
VRG4P40107 CCC1YLR220W 969 nt14.9□□□□□ -0.02
VRG4P40107 YBR190WYBR190W 312 nt14.61□□□□□ -0.07
VRG4P40107 ATS1YAL020C 1002 nt14.38□□□□□ -0.11
VRG4P40107 SCJ1YMR214W 1134 nt14.38□□□□□ -0.11
VRG4P40107 PET122YER153C 765 nt14.35□□□□□ -0.11
VRG4P40107 RTC3YHR087W 336 nt14.3□□□□□ -0.12
VRG4P40107 tP(UGG)O3tP(UGG)O3 72 nt14.24□□□□□ -0.13
VRG4P40107 RVS167YDR388W 1449 nt14.23□□□□□ -0.13
VRG4P40107 SCR1SCR1 522 nt14.07□□□□□ -0.16
VRG4P40107 RRN5YLR141W 1092 nt13.92□□□□□ -0.18
VRG4P40107 SSA3YBL075C 1950 nt13.87□□□□□ -0.19
VRG4P40107 SHR5YOL110W 714 nt13.81□□□□□ -0.2
VRG4P40107 YDJ1YNL064C 1230 nt13.71□□□□□ -0.21
VRG4P40107 YER088W-BYER088W-B 147 nt13.65□□□□□ -0.22
VRG4P40107 RSB1YOR049C 1065 nt13.61□□□□□ -0.23
VRG4P40107 DEP1YAL013W 1218 nt13.5□□□□□ -0.25
VRG4P40107 GAR1YHR089C 618 nt13.47□□□□□ -0.25
VRG4P40107 URN1YPR152C 1398 nt13.44□□□□□ -0.26
VRG4P40107 PUT4YOR348C 1884 nt13.32□□□□□ -0.28
VRG4P40107 PST2YDR032C 597 nt13.32□□□□□ -0.28
VRG4P40107 OPI9YLR338W 858 nt13.22□□□□□ -0.29
VRG4P40107 YNL208WYNL208W 600 nt13.18□□□□□ -0.3
VRG4P40107 SAH1YER043C 1350 nt13.18□□□□□ -0.3
VRG4P40107 RPN10YHR200W 807 nt13.11□□□□□ -0.31
VRG4P40107 ARE1YCR048W 1833 nt13.11□□□□□ -0.31
VRG4P40107 TIR1YER011W 765 nt13□□□□□ -0.33
VRG4P40107 YHR049C-AYHR049C-A 297 nt12.91□□□□□ -0.34
VRG4P40107 POA1YBR022W 534 nt12.91□□□□□ -0.34
VRG4P40107 SSA1YAL005C 1929 nt12.9□□□□□ -0.34
VRG4P40107 SRB2YHR041C 633 nt12.83□□□□□ -0.36
VRG4P40107 SHU1YHL006C 453 nt12.81□□□□□ -0.36
VRG4P40107 YJR018WYJR018W 363 nt12.79□□□□□ -0.36
VRG4P40107 PUN1YLR414C 792 nt12.77□□□□□ -0.37
VRG4P40107 YJR120WYJR120W 351 nt12.76□□□□□ -0.37
VRG4P40107 YKL097CYKL097C 411 nt12.76□□□□□ -0.37
VRG4P40107 PTC2YER089C 1395 nt12.69□□□□□ -0.38
VRG4P40107 YAL037C-BYAL037C-B 975 nt12.65□□□□□ -0.38
VRG4P40107 BSC6YOL137W 1494 nt12.61□□□□□ -0.39
VRG4P40107 BUD23YCR047C 828 nt12.6□□□□□ -0.39
VRG4P40107 SPT5YML010W 3192 nt12.51□□□□□ -0.41
VRG4P40107 WWM1YFL010C 636 nt12.49□□□□□ -0.41
VRG4P40107 NAB2YGL122C 1578 nt12.47□□□□□ -0.41
VRG4P40107 RPP2BYDR382W 333 nt12.46□□□□□ -0.41
VRG4P40107 FIS1YIL065C 468 nt12.39□□□□□ -0.43
VRG4P40107 MNP1YGL068W 585 nt12.38□□□□□ -0.43
VRG4P40107 YOR139CYOR139C 393 nt12.36□□□□□ -0.43
VRG4P40107 HOM6YJR139C 1080 nt12.35□□□□□ -0.43
VRG4P40107 SSA4YER103W 1929 nt12.33□□□□□ -0.44
VRG4P40107 DAL1YIR027C 1383 nt12.32□□□□□ -0.44
VRG4P40107 FPR4YLR449W 1179 nt12.32□□□□□ -0.44
VRG4P40107 YGR021WYGR021W 873 nt12.29□□□□□ -0.44
VRG4P40107 BDH2YAL061W 1254 nt12.29□□□□□ -0.44
VRG4P40107 INM2YDR287W 879 nt12.27□□□□□ -0.45
VRG4P40107 PHO4YFR034C 939 nt12.25□□□□□ -0.45
VRG4P40107 YBL100CYBL100C 315 nt12.23□□□□□ -0.45
VRG4P40107 YFL021C-AYFL021C-A 855 nt12.19□□□□□ -0.46
VRG4P40107 RKM5YLR137W 1104 nt12.16□□□□□ -0.46
VRG4P40107 NPL3YDR432W 1245 nt12.11□□□□□ -0.47
VRG4P40107 LSM3YLR438C-A 270 nt12.1□□□□□ -0.47
VRG4P40107 FUN26YAL022C 1554 nt12.09□□□□□ -0.47
VRG4P40107 YOL037CYOL037C 354 nt12.04□□□□□ -0.48
VRG4P40107 TRM9YML014W 840 nt12.02□□□□□ -0.49
VRG4P40107 YPS1YLR120C 1710 nt11.99□□□□□ -0.49
VRG4P40107 BDF1YLR399C 2061 nt11.95□□□□□ -0.5
VRG4P40107 CCT6YDR188W 1641 nt11.93□□□□□ -0.5
VRG4P40107 YDR095CYDR095C 411 nt11.92□□□□□ -0.5
VRG4P40107 MEP2YNL142W 1500 nt11.86□□□□□ -0.51
VRG4P40107 tM(CAU)CtM(CAU)C 72 nt11.84□□□□□ -0.51
VRG4P40107 IMT4tM(CAU)E 72 nt11.84□□□□□ -0.51
VRG4P40107 IMT3tM(CAU)J3 72 nt11.84□□□□□ -0.51
VRG4P40107 IMT1tM(CAU)O1 72 nt11.84□□□□□ -0.51
VRG4P40107 IMT2tM(CAU)P 72 nt11.84□□□□□ -0.51
VRG4P40107 ALF1YNL148C 765 nt11.84□□□□□ -0.51
VRG4P40107 YHR165W-AYHR165W-A 312 nt11.83□□□□□ -0.52
VRG4P40107 YLR281CYLR281C 468 nt11.82□□□□□ -0.52
VRG4P40107 WHI5YOR083W 888 nt11.78□□□□□ -0.52
VRG4P40107 TAT1YBR069C 1860 nt11.76□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms