Protein–RNA interactions for Protein: Q02774

SHR3, Secretory component protein SHR3, yeastyeast

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHR3Q02774 NSR1YGR159C 1245 nt20.82■□□□□ 0.92
SHR3Q02774 YML009W-BYML009W-B 477 nt20.67■□□□□ 0.9
SHR3Q02774 NOP1YDL014W 984 nt19.93■□□□□ 0.78
SHR3Q02774 MDJ1YFL016C 1536 nt18.89■□□□□ 0.61
SHR3Q02774 YKL036CYKL036C 393 nt18.02■□□□□ 0.48
SHR3Q02774 YJL027CYJL027C 417 nt17.4■□□□□ 0.38
SHR3Q02774 SRX1YKL086W 384 nt17.38■□□□□ 0.37
SHR3Q02774 Q0297Q0297 156 nt17.28■□□□□ 0.36
SHR3Q02774 DBP2YNL112W 1641 nt16.51■□□□□ 0.23
SHR3Q02774 YCR051WYCR051W 669 nt16.5■□□□□ 0.23
SHR3Q02774 SCS3YGL126W 1143 nt16.21■□□□□ 0.19
SHR3Q02774 YBR190WYBR190W 312 nt16.17■□□□□ 0.18
SHR3Q02774 TRN1tP(UGG)A 72 nt15.95■□□□□ 0.14
SHR3Q02774 SUF9tP(UGG)F 72 nt15.95■□□□□ 0.14
SHR3Q02774 SUF8tP(UGG)H 72 nt15.95■□□□□ 0.14
SHR3Q02774 tP(UGG)LtP(UGG)L 72 nt15.95■□□□□ 0.14
SHR3Q02774 SUF7tP(UGG)M 72 nt15.95■□□□□ 0.14
SHR3Q02774 tP(UGG)N1tP(UGG)N1 72 nt15.95■□□□□ 0.14
SHR3Q02774 tP(UGG)N2tP(UGG)N2 72 nt15.95■□□□□ 0.14
SHR3Q02774 tP(UGG)O1tP(UGG)O1 72 nt15.95■□□□□ 0.14
SHR3Q02774 SUF11tP(UGG)O2 72 nt15.95■□□□□ 0.14
SHR3Q02774 RTC3YHR087W 336 nt15.85■□□□□ 0.13
SHR3Q02774 CCC1YLR220W 969 nt15.82■□□□□ 0.12
SHR3Q02774 YOL085CYOL085C 342 nt15.61■□□□□ 0.09
SHR3Q02774 RPP1BYDL130W 321 nt15.52■□□□□ 0.08
SHR3Q02774 RVS167YDR388W 1449 nt15.51■□□□□ 0.07
SHR3Q02774 PKP1YIL042C 1185 nt15.44■□□□□ 0.06
SHR3Q02774 SCJ1YMR214W 1134 nt15.32■□□□□ 0.04
SHR3Q02774 PUT4YOR348C 1884 nt14.97□□□□□ -0.01
SHR3Q02774 tP(UGG)O3tP(UGG)O3 72 nt14.96□□□□□ -0.01
SHR3Q02774 PET122YER153C 765 nt14.88□□□□□ -0.03
SHR3Q02774 SSA3YBL075C 1950 nt14.87□□□□□ -0.03
SHR3Q02774 SHR5YOL110W 714 nt14.84□□□□□ -0.03
SHR3Q02774 URN1YPR152C 1398 nt14.67□□□□□ -0.06
SHR3Q02774 SCR1SCR1 522 nt14.65□□□□□ -0.06
SHR3Q02774 ARE1YCR048W 1833 nt14.59□□□□□ -0.07
SHR3Q02774 DEP1YAL013W 1218 nt14.56□□□□□ -0.08
SHR3Q02774 SAH1YER043C 1350 nt14.54□□□□□ -0.08
SHR3Q02774 OPI9YLR338W 858 nt14.52□□□□□ -0.09
SHR3Q02774 POA1YBR022W 534 nt14.49□□□□□ -0.09
SHR3Q02774 YDJ1YNL064C 1230 nt14.47□□□□□ -0.09
SHR3Q02774 YHR049C-AYHR049C-A 297 nt14.44□□□□□ -0.1
SHR3Q02774 RRN5YLR141W 1092 nt14.4□□□□□ -0.1
SHR3Q02774 RPN10YHR200W 807 nt14.39□□□□□ -0.11
SHR3Q02774 ATS1YAL020C 1002 nt14.37□□□□□ -0.11
SHR3Q02774 YNL208WYNL208W 600 nt14.28□□□□□ -0.12
SHR3Q02774 BSC6YOL137W 1494 nt14.25□□□□□ -0.13
SHR3Q02774 GAR1YHR089C 618 nt14.24□□□□□ -0.13
SHR3Q02774 YER088W-BYER088W-B 147 nt14.12□□□□□ -0.15
SHR3Q02774 PUN1YLR414C 792 nt14.11□□□□□ -0.15
SHR3Q02774 BUD23YCR047C 828 nt14.09□□□□□ -0.15
SHR3Q02774 RSB1YOR049C 1065 nt14.02□□□□□ -0.17
SHR3Q02774 PTC2YER089C 1395 nt14□□□□□ -0.17
SHR3Q02774 YJR018WYJR018W 363 nt13.96□□□□□ -0.17
SHR3Q02774 NAB2YGL122C 1578 nt13.86□□□□□ -0.19
SHR3Q02774 SPT5YML010W 3192 nt13.79□□□□□ -0.2
SHR3Q02774 TIR1YER011W 765 nt13.76□□□□□ -0.21
SHR3Q02774 SSA1YAL005C 1929 nt13.67□□□□□ -0.22
SHR3Q02774 YJR120WYJR120W 351 nt13.65□□□□□ -0.22
SHR3Q02774 FIS1YIL065C 468 nt13.64□□□□□ -0.23
SHR3Q02774 DAL1YIR027C 1383 nt13.62□□□□□ -0.23
SHR3Q02774 RPP2BYDR382W 333 nt13.61□□□□□ -0.23
SHR3Q02774 FPR4YLR449W 1179 nt13.61□□□□□ -0.23
SHR3Q02774 SSA4YER103W 1929 nt13.52□□□□□ -0.25
SHR3Q02774 INM2YDR287W 879 nt13.51□□□□□ -0.25
SHR3Q02774 PHO4YFR034C 939 nt13.49□□□□□ -0.25
SHR3Q02774 MEP2YNL142W 1500 nt13.4□□□□□ -0.26
SHR3Q02774 SRB2YHR041C 633 nt13.36□□□□□ -0.27
SHR3Q02774 PST2YDR032C 597 nt13.35□□□□□ -0.27
SHR3Q02774 YPS1YLR120C 1710 nt13.35□□□□□ -0.27
SHR3Q02774 YBL100CYBL100C 315 nt13.34□□□□□ -0.27
SHR3Q02774 YHR165W-AYHR165W-A 312 nt13.26□□□□□ -0.29
SHR3Q02774 BDH2YAL061W 1254 nt13.24□□□□□ -0.29
SHR3Q02774 YDR095CYDR095C 411 nt13.21□□□□□ -0.29
SHR3Q02774 DCW1YKL046C 1350 nt13.2□□□□□ -0.3
SHR3Q02774 FUN26YAL022C 1554 nt13.16□□□□□ -0.3
SHR3Q02774 WWM1YFL010C 636 nt13.09□□□□□ -0.31
SHR3Q02774 ALF1YNL148C 765 nt13.08□□□□□ -0.32
SHR3Q02774 TRM9YML014W 840 nt13.06□□□□□ -0.32
SHR3Q02774 EMI2YDR516C 1503 nt13.02□□□□□ -0.33
SHR3Q02774 BDF1YLR399C 2061 nt13□□□□□ -0.33
SHR3Q02774 LSM3YLR438C-A 270 nt12.99□□□□□ -0.33
SHR3Q02774 YMR090WYMR090W 684 nt12.98□□□□□ -0.33
SHR3Q02774 RPP2AYOL039W 321 nt12.97□□□□□ -0.33
SHR3Q02774 CCT6YDR188W 1641 nt12.94□□□□□ -0.34
SHR3Q02774 PTP1YDL230W 1008 nt12.92□□□□□ -0.34
SHR3Q02774 SHU1YHL006C 453 nt12.92□□□□□ -0.34
SHR3Q02774 YGR021WYGR021W 873 nt12.91□□□□□ -0.34
SHR3Q02774 CAC2YML102W 1407 nt12.89□□□□□ -0.35
SHR3Q02774 YDL221WYDL221W 552 nt12.89□□□□□ -0.35
SHR3Q02774 YFL021C-AYFL021C-A 855 nt12.89□□□□□ -0.35
SHR3Q02774 SUF2tP(AGG)C 72 nt12.88□□□□□ -0.35
SHR3Q02774 SUF10tP(AGG)N 72 nt12.88□□□□□ -0.35
SHR3Q02774 YBR220CYBR220C 1683 nt12.87□□□□□ -0.35
SHR3Q02774 YAL037C-BYAL037C-B 975 nt12.85□□□□□ -0.35
SHR3Q02774 SIS1YNL007C 1059 nt12.84□□□□□ -0.35
SHR3Q02774 TAT1YBR069C 1860 nt12.83□□□□□ -0.36
SHR3Q02774 HOM6YJR139C 1080 nt12.83□□□□□ -0.36
SHR3Q02774 SDH1YKL148C 1923 nt12.79□□□□□ -0.36
SHR3Q02774 MNP1YGL068W 585 nt12.74□□□□□ -0.37
Retrieved 100 of 7,029 protein–RNA pairs in 12 ms