Protein–RNA interactions for Protein: P40558

CFD1, Cytosolic Fe-S cluster assembly factor CFD1, yeastyeast

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CFD1P40558 YML009W-BYML009W-B 477 nt19.56■□□□□ 0.72
CFD1P40558 NSR1YGR159C 1245 nt19.21■□□□□ 0.67
CFD1P40558 NOP1YDL014W 984 nt19.15■□□□□ 0.66
CFD1P40558 YKL036CYKL036C 393 nt17.98■□□□□ 0.47
CFD1P40558 Q0297Q0297 156 nt16.91■□□□□ 0.3
CFD1P40558 YJL027CYJL027C 417 nt16.82■□□□□ 0.28
CFD1P40558 SRX1YKL086W 384 nt16.76■□□□□ 0.27
CFD1P40558 MDJ1YFL016C 1536 nt16.74■□□□□ 0.27
CFD1P40558 SCS3YGL126W 1143 nt16.53■□□□□ 0.24
CFD1P40558 YCR051WYCR051W 669 nt15.89■□□□□ 0.13
CFD1P40558 YOL085CYOL085C 342 nt15.6■□□□□ 0.09
CFD1P40558 PKP1YIL042C 1185 nt15.29■□□□□ 0.04
CFD1P40558 RPP1BYDL130W 321 nt15.16■□□□□ 0.02
CFD1P40558 SCJ1YMR214W 1134 nt15.05■□□□□ -0
CFD1P40558 DBP2YNL112W 1641 nt14.99□□□□□ -0.01
CFD1P40558 TRN1tP(UGG)A 72 nt14.97□□□□□ -0.01
CFD1P40558 SUF9tP(UGG)F 72 nt14.97□□□□□ -0.01
CFD1P40558 SUF8tP(UGG)H 72 nt14.97□□□□□ -0.01
CFD1P40558 tP(UGG)LtP(UGG)L 72 nt14.97□□□□□ -0.01
CFD1P40558 SUF7tP(UGG)M 72 nt14.97□□□□□ -0.01
CFD1P40558 tP(UGG)N1tP(UGG)N1 72 nt14.97□□□□□ -0.01
CFD1P40558 tP(UGG)N2tP(UGG)N2 72 nt14.97□□□□□ -0.01
CFD1P40558 tP(UGG)O1tP(UGG)O1 72 nt14.97□□□□□ -0.01
CFD1P40558 SUF11tP(UGG)O2 72 nt14.97□□□□□ -0.01
CFD1P40558 ATS1YAL020C 1002 nt14.89□□□□□ -0.03
CFD1P40558 CCC1YLR220W 969 nt14.8□□□□□ -0.04
CFD1P40558 PET122YER153C 765 nt14.44□□□□□ -0.1
CFD1P40558 SCR1SCR1 522 nt14.34□□□□□ -0.11
CFD1P40558 tP(UGG)O3tP(UGG)O3 72 nt14.28□□□□□ -0.12
CFD1P40558 YBR190WYBR190W 312 nt14.21□□□□□ -0.13
CFD1P40558 RRN5YLR141W 1092 nt14.08□□□□□ -0.16
CFD1P40558 RVS167YDR388W 1449 nt14.07□□□□□ -0.16
CFD1P40558 RTC3YHR087W 336 nt13.86□□□□□ -0.19
CFD1P40558 RSB1YOR049C 1065 nt13.84□□□□□ -0.19
CFD1P40558 YER088W-BYER088W-B 147 nt13.81□□□□□ -0.2
CFD1P40558 YDJ1YNL064C 1230 nt13.81□□□□□ -0.2
CFD1P40558 PST2YDR032C 597 nt13.76□□□□□ -0.21
CFD1P40558 SHR5YOL110W 714 nt13.7□□□□□ -0.22
CFD1P40558 GAR1YHR089C 618 nt13.43□□□□□ -0.26
CFD1P40558 YKL097CYKL097C 411 nt13.33□□□□□ -0.28
CFD1P40558 SSA3YBL075C 1950 nt13.29□□□□□ -0.28
CFD1P40558 DEP1YAL013W 1218 nt13.2□□□□□ -0.3
CFD1P40558 URN1YPR152C 1398 nt13.12□□□□□ -0.31
CFD1P40558 SHU1YHL006C 453 nt13.11□□□□□ -0.31
CFD1P40558 YNL208WYNL208W 600 nt13.03□□□□□ -0.32
CFD1P40558 TIR1YER011W 765 nt12.97□□□□□ -0.33
CFD1P40558 RPN10YHR200W 807 nt12.97□□□□□ -0.33
CFD1P40558 OPI9YLR338W 858 nt12.89□□□□□ -0.35
CFD1P40558 YAL037C-BYAL037C-B 975 nt12.8□□□□□ -0.36
CFD1P40558 YOR139CYOR139C 393 nt12.79□□□□□ -0.36
CFD1P40558 SSA1YAL005C 1929 nt12.77□□□□□ -0.37
CFD1P40558 SAH1YER043C 1350 nt12.71□□□□□ -0.37
CFD1P40558 PUT4YOR348C 1884 nt12.67□□□□□ -0.38
CFD1P40558 SRB2YHR041C 633 nt12.65□□□□□ -0.38
CFD1P40558 NPL3YDR432W 1245 nt12.54□□□□□ -0.4
CFD1P40558 YJR018WYJR018W 363 nt12.54□□□□□ -0.4
CFD1P40558 ARE1YCR048W 1833 nt12.53□□□□□ -0.4
CFD1P40558 PUN1YLR414C 792 nt12.49□□□□□ -0.41
CFD1P40558 YJR120WYJR120W 351 nt12.47□□□□□ -0.41
CFD1P40558 HOM6YJR139C 1080 nt12.47□□□□□ -0.41
CFD1P40558 WWM1YFL010C 636 nt12.46□□□□□ -0.41
CFD1P40558 YGR021WYGR021W 873 nt12.46□□□□□ -0.41
CFD1P40558 MNP1YGL068W 585 nt12.43□□□□□ -0.42
CFD1P40558 RPP2BYDR382W 333 nt12.34□□□□□ -0.43
CFD1P40558 YHR049C-AYHR049C-A 297 nt12.34□□□□□ -0.43
CFD1P40558 YOL037CYOL037C 354 nt12.34□□□□□ -0.43
CFD1P40558 POA1YBR022W 534 nt12.29□□□□□ -0.44
CFD1P40558 PTC2YER089C 1395 nt12.29□□□□□ -0.44
CFD1P40558 tM(CAU)CtM(CAU)C 72 nt12.27□□□□□ -0.45
CFD1P40558 IMT4tM(CAU)E 72 nt12.27□□□□□ -0.45
CFD1P40558 IMT3tM(CAU)J3 72 nt12.27□□□□□ -0.45
CFD1P40558 IMT1tM(CAU)O1 72 nt12.27□□□□□ -0.45
CFD1P40558 IMT2tM(CAU)P 72 nt12.27□□□□□ -0.45
CFD1P40558 RKM5YLR137W 1104 nt12.27□□□□□ -0.45
CFD1P40558 YFL021C-AYFL021C-A 855 nt12.25□□□□□ -0.45
CFD1P40558 BDH2YAL061W 1254 nt12.18□□□□□ -0.46
CFD1P40558 LSM3YLR438C-A 270 nt12.11□□□□□ -0.47
CFD1P40558 NAB2YGL122C 1578 nt12.09□□□□□ -0.47
CFD1P40558 YLR281CYLR281C 468 nt12.08□□□□□ -0.48
CFD1P40558 BUD23YCR047C 828 nt12.07□□□□□ -0.48
CFD1P40558 INM2YDR287W 879 nt12.06□□□□□ -0.48
CFD1P40558 PUS2YGL063W 1113 nt12.03□□□□□ -0.48
CFD1P40558 DAL1YIR027C 1383 nt11.99□□□□□ -0.49
CFD1P40558 YBL100CYBL100C 315 nt11.98□□□□□ -0.49
CFD1P40558 WHI5YOR083W 888 nt11.98□□□□□ -0.49
CFD1P40558 FIS1YIL065C 468 nt11.96□□□□□ -0.49
CFD1P40558 BSC6YOL137W 1494 nt11.95□□□□□ -0.5
CFD1P40558 FPR4YLR449W 1179 nt11.93□□□□□ -0.5
CFD1P40558 TRM9YML014W 840 nt11.9□□□□□ -0.5
CFD1P40558 MOT3YMR070W 1473 nt11.89□□□□□ -0.51
CFD1P40558 PHO4YFR034C 939 nt11.87□□□□□ -0.51
CFD1P40558 FUN26YAL022C 1554 nt11.86□□□□□ -0.51
CFD1P40558 YPR011CYPR011C 981 nt11.81□□□□□ -0.52
CFD1P40558 CCT6YDR188W 1641 nt11.77□□□□□ -0.53
CFD1P40558 DSK2YMR276W 1122 nt11.74□□□□□ -0.53
CFD1P40558 FMP45YDL222C 930 nt11.72□□□□□ -0.53
CFD1P40558 YLR154C-GYLR154C-G 150 nt11.72□□□□□ -0.53
CFD1P40558 YLR236CYLR236C 324 nt11.71□□□□□ -0.53
CFD1P40558 IMP2'YIL154C 1041 nt11.69□□□□□ -0.54
CFD1P40558 YCH1YGR203W 447 nt11.63□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 22.6 ms